Acipenser ruthenus (sterlet): 117415426
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Entry
117415426 CDS
T07327
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C-like
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
arut04260
Cardiac muscle contraction
arut04261
Adrenergic signaling in cardiomyocytes
arut04270
Vascular smooth muscle contraction
arut04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117415426
04020 Calcium signaling pathway
117415426
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117415426
09153 Circulatory system
04260 Cardiac muscle contraction
117415426
04261 Adrenergic signaling in cardiomyocytes
117415426
04270 Vascular smooth muscle contraction
117415426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117415426
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117415426
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
DUF4834
Motif
Other DBs
NCBI-GeneID:
117415426
NCBI-ProteinID:
XP_034778188
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All DBs
Position
7:complement(32443499..32564418)
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AA seq
1866 aa
AA seq
DB search
MVPLLHIALLVLFVIIIYAIIGLELFMGKMHRTCMFFRDGLTGMTAEEKPAPCAPDTAHG
RHCKNTTKCEMGWVGPNDGISNFDNFAFAMLTVFQCITMEGWTDVLYNMQDAMGYELPWV
YFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQ
AEDIDPENEEEGLDEEKPRLSMPTSENESVNADRGAAGELEGENCYTRLANRISKSKFSR
YSRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHHNQVDWLTEVQDTANKVML
VLFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKVMSPLGISVLRCVRL
LRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMET
RRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYIL
LNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKHPDNEKQPIEEEKKEEKI
ELKSITVDGEITIDEFPVDDNEEKNPYPANDFPGDDDEEEPEMPMGPRPRPLSEVHLKEK
AVPMPEARAFFIFSHTNEFRISCHKIVNHNIFTNLILFLILLSSISLAAEDPVRNDSFRN
KILGYADYVFTGIFTIEIILKMTAYGAFLHKGSFCRNYFNILDLVVVSVSLISSGIQSSA
INVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTSLLQFMFACIGVQL
FKGKFYTCSDGSKQTEAECRGYYIVYKDGDVSMPDKAERKWENSNFNFDNVPTGMLALFT
VSTFEGWPGLLYRAIDSHSEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQ
EQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKVWYVVNSTYFEYLMFVLIL
LNTICLAMQHHGQSMSFNNAMNVLNMLFTGLFTVEMILKLIAFKPRHYFCDAWNTFDALI
VVGSVVDIAITEVNGLQNTEDNSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQ
ALPYVALLIVMLFFIYAVIGMQMFGKIALRDNSPVNRNNNFQTFPQAVLLLFRCATGEAW
QEIMLACKPPRPCESGSEPGHSNEEENCGSHFAIFYFVSFYMLCAFLIINLFVAVIMDNF
DYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVA
CKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLDQANEELRAIIKKIWKRTSMK
LLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPTQKNSLSLQAGLRTLH
DIGPEIRRAISGDLIVEEELEKAMKETLTAVSEDNISRRAGGLFGNHVNYYQSDGRNTFP
QSFTTQRPLHISKEGCSPDLESPSNEKLVDSTFTPSSYSSSGSNANINNANNTAIGCFPN
PATYQSSVSTVDWPGAPLTASLRAAAWQLSSKRTRYETLARSDSGDSRLPIIRREEASPD
ETYDENFNDNAVYCSEQSMLSTEMLAYEDEENKQLTPMEQGDRKENAKAWQSPTRAFLCP
KALGRRSSFHLECLKRQRSHATDVSQNTALPLHLVHHQALAVAGLSPLLRRSHSPTLFSR
LCSTPPATPCTEGHSHQRVPTLRLEGTSSHEKLNSSLPSVNCGSWFADNANGNPQRVRPV
SLSVPSQCRDSALQSHGSACSLVEAVLISEGLGRYAHDPTFIEVTKQEIADACDMTIEEM
ENAADNILNGNSQPSPNGNLLPFITCRDQGARGQQSGLEEEEQGEQRDCGVAEEGLKDDM
VCDSSL
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccctactgcacatcgccttgctggtgctctttgtaatcatcatctacgccatc
ataggactggaacttttcatgggcaaaatgcacaggacctgcatgttcttcagagatggc
ctaacaggaatgactgcagaggagaagccggccccctgtgccccggacacagcgcacggg
cggcactgtaaaaacaccaccaaatgcgagatgggctgggtgggacccaacgacggcatc
agcaacttcgataacttcgccttcgccatgctcaccgtctttcagtgcatcaccatggag
ggctggaccgacgtgctctacaacatgcaggacgctatgggctatgagctcccttgggtc
tattttgtcagtctggttatcttcggatcctttttcgttctaaatctggttctgggggtg
ttgagcggagagttctcgaaggagcgtgagaaggccaaggcacgcggagacttccagaaa
ctgagagagaagcagcagttggaggaggatctgaaggggtacctggactggatcacccag
gcagaggacatcgaccctgagaacgaggaggaggggctggacgaggagaagccacgcctg
agcatgcctaccagtgaaaatgaatctgtgaacgcagacaggggggcagcaggggaactg
gaaggagaaaactgttacactcgccttgcaaataggatctccaaatccaagttcagtcgg
tactcgcggaggtggaaccggttttgccggaggaagtgccgcgcggctgtgaagtccaac
gtgttctattggctggtgatcttcctggtgttcctcaacactctgaccatcgcctctgag
caccacaatcaagtcgactggctcaccgaggttcaagacactgccaacaaggtcatgctg
gtcctgttcacagcggagatgttgctcaagatgtacagcctgggcctgcaggcctacttc
gtgtcgctgttcaatcgcttcgactgcttcatcgtgtgcgggggcatcctggagaccatc
ctggtggagaccaaggtcatgtctccgctgggcatctcggtgctgcgctgcgtgcggctg
ctaaggatcttcaagatcacccggtactggaattccctgagtaacctggtggcgtccctg
ctgaactcagtgcgctccatcgcctccctcctcctcctgctcttcctctttatcatcatc
ttctccctgctcggcatgcagctgtttggaggcaagtttaacttcgatgagatggagaca
cggagaagcaccttcgacaacttcccccagtccctgctcactgtctttcagatcctgacc
ggagaagactggaactccgtgatgtatgatggaatcatggcctacggaggaccctctttc
cctggaatgctggtctgcatttacttcatcatcctgttcatctgcggaaactatatcctg
ctgaatgtcttcttggccatcgctgtggataacctggcggatgccgagagtctgacgtcg
gcccagaaggaggaagaggaggagaaggagaggaagaaactggccaggactgccagtccg
gagaaacatcctgacaatgagaagcaaccgattgaagaggagaaaaaagaagagaaaatc
gagctgaaatcgatcacggtcgacggagagatcactattgatgaattcccagtggatgac
aatgaagagaagaatccgtaccctgccaatgacttcccaggtgatgatgacgaggaggag
cccgagatgcccatgggcccgcggccccgtccgctctctgaggtgcatctgaaggagaag
gctgtccccatgcctgaggcccgggccttcttcatcttcagccacactaacgagttccgg
atctcctgccacaagatagtgaaccacaacatcttcaccaacctcatcctcttcctcatc
ctgctcagcagcatctccctggcagctgaggaccctgtgcggaacgactccttcaggaac
aagatcctgggatatgccgactatgtcttcactggcatcttcacgatagagatcatcctg
aagatgactgcctatggagctttcctccacaagggatccttctgtcggaactacttcaac
atcctggacctggtggtggtcagcgtgtctctcatctcctctggcattcagtccagcgcc
atcaatgtggtgaagatcctgagagtcctgagggtgctgagacctctgagagctatcaac
agagccaaggggctgaagcatgtggtccagtgtgtgtttgtggctatacggaccattgga
aacatcgtcatcgtcaccagtctgctgcagttcatgtttgcctgtattggcgtccagcta
ttcaaggggaagttctacacttgctcagatgggtcaaagcagacagaggcggaatgcaga
ggatactacattgtgtacaaagacggggatgtgagcatgccagacaaagcagagcgcaag
tgggaaaacagcaacttcaacttcgataatgtaccgactgggatgctagctctcttcacc
gtctccacctttgagggctggccaggtctgctctacagagccattgattcccattcggag
gatgtggggcctatctacaaccaccgtgtggagatctccatcttcttcatcatctacatc
atcatcatcgccttcttcatgatgaacatcttcgtgggcttcgtcatcgtcaccttccag
gagcagggagagcaggagtacaagaactgtgagctggacaagaaccagcgccagtgtgtg
gaatacgccctgaaggcccgtcccctgcggcgctacattcccaagaacccctaccagtac
aaggtgtggtatgtcgtcaactccacctacttcgagtacctcatgttcgtcctcatcctc
ctcaacaccatctgcctggccatgcagcatcatggccagtctatgtccttcaacaatgcc
atgaatgtgctcaacatgctgtttactgggctcttcaccgtggagatgatcctcaaactc
atcgcctttaagccacggcactatttttgtgatgcatggaatacatttgatgccttaatt
gttgttggtagcgttgttgatatagctatcaccgaggtgaacgggctgcagaacaccgaa
gacaactcccggatctcaatcaccttcttccggctcttccgggtcatgagactggtgaag
ctactgtcccggggagaaggaatacggaccctgctgtggaccttcatcaagtctttccag
gccctgccatatgtagctctcctcatagtgatgctttttttcatctatgctgtgattggg
atgcagatgtttggtaagattgcgctaagggacaacagtcctgttaacagaaacaacaac
ttccaaaccttcccccaggctgtgctgctgctcttcagatgtgccacaggagaagcctgg
caggagatcatgctggcctgtaaacccccacgtccttgtgagagtggctcggagccggga
cacagcaacgaggaagagaactgcggcagccactttgccatcttctacttcgtcagcttc
tacatgctctgcgccttcttgatcattaacctctttgtggctgtcatcatggacaacttt
gactacctgacgagagactggtcaatcctcggaccccaccacctagacgagttcaagagg
atctgggctgaatacgacccagaagcaaagggaaggataaaacacttggatgtggtgact
ctgctgcggagaatccagccccctctcggttttgggaagctgtgtcctcacagagttgcc
tgcaagcggctggtctccatgaacatgcctctcaacagcgacggcacggtcatgttcaac
gccactctctttgctttggtacgaactgcattgcggataaaaactgaaggcaacctggac
caggccaatgaggagctcagagcgatcattaagaaaatctggaaaaggaccagcatgaag
ctcctggaccaagtggtgccacctgcgggagatgatgaagtcacggttgggaagttttat
gccaccttcctgatccaggagtatttccgaaagtttaagaagcgtaaggagcagggtctg
gtcgggaagcctactcagaaaaattctctgtcattgcaggctggcctgcgcactctgcat
gacatcgggccggagatccgcagagcgatatcgggagacctgatcgtggaggaggagctc
gagaaggccatgaaggagaccttgacagctgtgtctgaggacaatatctccaggagagct
ggtggcttgtttggtaaccatgtcaactattaccagagcgatggacgaaacaccttccca
caatccttcactacccagcggcccttacacatcagcaaggagggctgcagcccagacctg
gaatctccatctaatgagaagctggtcgactccaccttcaccccaagcagctactcctca
tcaggctccaatgccaacattaacaatgccaacaacacagccattggctgcttccccaac
cctgcaacctaccagagcagcgttagcaccgtggactggccaggtgcccccctgacagcc
agcttgcgggcagcagcctggcaactcagctcaaagaggacacgttatgaaacccttgca
cgctctgactccggagatagccgcctgcccatcatccgccgggaagaggcgtctcccgat
gagacgtacgacgagaacttcaacgacaacgctgtgtactgcagcgagcagagcatgctg
tccaccgagatgctggcatacgaagatgaggagaacaaacagctaacgcccatggagcag
ggtgacaggaaggagaacgcaaaggcctggcagtctcctactagagccttcttgtgccca
aaagcattagggagaagatcatcctttcatctggagtgtttaaagagacagaggagccac
gcaacagacgtgtctcaaaacactgccctgccccttcatcttgtacatcatcaggccttg
gcggtggcaggactcagtcccctgctccgcaggagccactcccccacgctgttcagccgc
ctgtgctccacgccgcccgccacaccctgcaccgagggccattcccaccagcgcgtgccc
accctgcggctggagggcaccagctcccacgagaagctcaacagcagcctgccctcagtg
aactgcggctcctggttcgcagacaacgctaacggcaacccacagcgggtacggccagtc
tcactctccgtgccgagccagtgcagggactcagcactgcagagccacggcagcgcgtgc
agcctggtcgaggcggttctgatctcagaaggactgggccggtacgcccatgaccccacc
ttcatcgaggtgaccaagcaggagatagctgacgcctgtgacatgacgatagaggagatg
gagaacgctgctgacaacatcctcaacgggaacagccagcccagcccgaacggcaacctc
ctgcccttcatcacctgcagggaccagggagctcgggggcaacagagcggactggaggaa
gaagagcagggggagcagcgagactgtggggtagcagaggagggcctcaaggacgacatg
gtttgcgacagcagcctgtag
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