Acipenser ruthenus (sterlet): 117420605
Help
Entry
117420605 CDS
T07327
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
arut04144
Endocytosis
arut04510
Focal adhesion
arut04540
Gap junction
arut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117420605
04020 Calcium signaling pathway
117420605
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117420605
09144 Cellular community - eukaryotes
04510 Focal adhesion
117420605
04540 Gap junction
117420605
09142 Cell motility
04810 Regulation of actin cytoskeleton
117420605
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arut01001
]
117420605
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
arut04090
]
117420605
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117420605
Protein kinases [BR:
arut01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117420605
CD molecules [BR:
arut04090
]
Proteins
117420605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
Motif
Other DBs
NCBI-GeneID:
117420605
NCBI-ProteinID:
XP_033889986
LinkDB
All DBs
Position
1:complement(62563287..62584733)
Genome browser
AA seq
1478 aa
AA seq
DB search
MAVLKTFLTLGCLLLGISIGPQSADCEQPMPVIYPDKDELIVQPHSSINLSCSGESQLSW
DAPVSLKDVTLIEELVNTGHFVTSLHVQNASASHTGFYTCMYAPLDNNNEEMDGSSVYIF
VPDPAVAFLVHEDPLSKHVLPSPFGMEIPCRVSDPRTHVTLTNVDTGVEVNSQYDNKRGF
IGIFPSGTYICKTTVNGVKTQSEEYIVHGEIELSELHVELEVHQAVLKEGEHISLTCVVS
GDHMFPQDWQYPGKQAGRGVQDMKTMQDGEVRYTLSIPRASVKDTGDYKCSVTQTEDETI
VKTKNVTVYEKGFITLVPTFGQMEYANLYDDKELTVNIEAYPAPKVTWLRDNVAVNGGYA
VTTHISGIRYQSTLRLIHFKEEDIGNYTIKVENENKQTSYTFSLRVKGPRLPLRQQALPV
ISPHKEELIVQPLSSFKLSCSGESEVTWDAPVEDSQVMLEEEEDNSGLFVTSLNVLNASA
SNTGYYHCYYSAVNNTEDANLDKSSIYIYVPDPAVPFIPPLNQFSQHVPATYEDMEIPCR
VTDPHSDVTLMNADTGLAISSLYDSKRGFIGVFPEGTYVCETIINGVEVMSEEYIVHGWR
ETSELHVELEAPKTVVMEGEPIIVTCVARGSEMLEDHWKYPGKLANRGLKTVKENKKDVE
IRYTLSIPQASVKDSGLYECSITHVMSDEIQLKKVTITVYEKGFITLDPKFAKMEFAKLH
EVKEFKMNIKAYPEPKMTWFKDSVILNEDNTEITSTKTEISETRYQSTLTLIRAKEEDSG
NYTILVQNGNESVSYSFYLQVKVPAAIVDLMDVHHGSNGGQSVVCIADGLPAPQVEWFIC
KNIKKCANDSSQWTPLSINSTDITIETHLDEENKIESEVIFAKLEDTLAVKCLAKNELAA
VAREVKLVSHALRSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESISPDG
HEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTVYGLSHSQPVMKVAVKML
KPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKAGPIYIITEYCFYGDLVNYLHKN
RENFLNRHPEKTKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEMK
DGSKYSDIQRSNYDHPPSHEQKSLTDTEVNNLLSDDSSEGLTVMDLLSFTYQVARGMEFL
ASKNCVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSCGSTFLPVKWMAPESIFD
NMYTTLSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMTRPEHANSEVYEMM
MRCWSSEPEKRPSFCSLSDTVASLLPVEYKKSYEKVNHDFLKSDHPAVTRMKAETEDTYI
GVMYKNEDKLKDRESGFDEQRLSSDSGYIIPLPDLDPVSDDEYSKRNRHSSQTSEESAIE
TGSSSSTFIKREDETIEDIEMMDDMGMDSSDLVEDSFL
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcttgaagacattcctgactctaggatgtctcttgcttgggatctctataggt
ccccagtcggctgactgtgaacagccaatgcctgtcatttaccctgataaagatgaactc
attgtacagccccactcttccatcaatctgagttgctctggagaaagccagctgagctgg
gacgcccctgtctcactgaaagatgtcactctgatagaagaacttgtgaacaccggacac
ttcgtcacatctctgcatgtacagaacgcctctgcttcccatactggattctacacctgc
atgtatgcaccattagataataacaacgaggagatggatgggagctcagtttacattttt
gttccagatccagcagtggctttccttgtccacgaagatccactcagtaaacatgttctt
ccaagtccctttggtatggaaattccgtgccgtgtatctgacccgcggacacacgtgacc
ctcaccaacgtagatacaggcgttgaggtgaacagccagtatgacaacaaaagaggcttc
atcgggatcttcccttccggaacctacatttgtaaaaccactgtcaatggagtgaaaact
caaagtgaagaatatatagtccacggcgaaatagagctttccgaactccatgttgaacta
gaggtgcatcaggcagtgctgaaggaaggggagcatatttctttaacttgcgtagtcagt
ggggaccacatgttcccgcaggactggcagtaccctgggaaacaggctggcagaggagtg
caggacatgaagactatgcaagatggtgaggtccggtacacactgagtattcctcgagcc
tctgtgaaagacactggggattacaaatgttctgtaacacaaacagaggacgagacaata
gtgaagacgaagaatgtaactgtttatgagaaaggatttataactttggttcccacattt
ggccaaatggaatatgcaaacttgtatgatgataaggaactcacagtgaacattgaagct
tacccagcacccaaggtgacctggttgagggacaatgttgcagtcaatggaggctatgca
gtgacaacccatataagtggaatcaggtatcagagtactctgagactgattcactttaaa
gaggaggacatcggaaactatactattaaggttgagaatgaaaacaagcaaactagttac
acattttcattacgggtgaaagggcctcgtttacctctgcgccagcaagcattgccagta
atttccccccataaagaggaactcattgtgcagcctctatcctcgttcaaactgagttgc
tctggggagagcgaggtaacctgggatgcccctgtcgaggacagtcaggtcatgcttgag
gaggaagaagacaacagtggactctttgtgacttctcttaacgtactgaatgcctcggct
tccaatacaggatactaccactgttactactcagcagtgaacaacacagaggatgctaat
ctggacaagagctccatttacatttatgttccagatccagcagttccttttattccccct
ctaaaccaatttagtcaacacgttcctgcaacctatgaggacatggaaatcccttgccgt
gtaactgacccacattcagacgttaccctgatgaatgcagacacaggcttggcaatatcc
agcctgtatgacagcaaaagaggcttcattggggtctttcccgaagggacctatgtatgt
gaaaccatcattaatggcgtggaagtcatgagtgaagaatatatagtgcatggctggaga
gaaacctctgaacttcatgttgagctagaggctccaaaaacagtggttatggaaggggag
cctatcatcgttacctgtgtagccagggggagtgaaatgcttgaggaccactggaagtac
cctgggaaactggctaacagaggactgaagactgtgaaggaaaacaagaaggacgttgaa
atccggtacactctgagtatcccacaggcctcagtgaaggacagtgggctgtacgagtgc
tccataacccatgtgatgagtgatgagatacaactgaagaaggtcaccatcacagtttac
gagaaaggatttatcactttggacccaaagtttgccaaaatggaatttgctaagctacat
gaagtaaaggaatttaaaatgaacatcaaagcatacccagagcctaaaatgacctggttt
aaggacagtgttattctgaatgaagacaacacagaaataaccagcaccaagacagaaatc
agtgaaaccagatatcagagtaccctgacgctcattcgtgcaaaagaagaggacagtggc
aactacaccattttagtgcagaatggaaacgagagtgttagttactcattttacttgcaa
gtgaaagttccagcagccatagtggatctgatggatgttcaccacggttccaacggtgga
cagtcggtagtgtgtatagctgatgggttacctgcaccccaagttgaatggttcatttgc
aagaacatcaaaaaatgtgccaatgattcatcacagtggactcctttgtccataaattca
actgatatcactattgaaacccatctagatgaagagaacaagattgaaagtgaagtgata
tttgccaaactagaggatactttggcagtgaagtgtctagctaagaatgagcttgctgca
gtggcccgagaagtgaaactagtttcacacgctttacgctctgagttaacagtggctgct
gcagtgctggttttgttggtcattgtcatcatctcactgatagtgctcgtcattatctgg
aaacagaaacccagatatgagattagatggagggtgattgagtccatcagccctgacggc
catgaatacatctatgtggatcccatgcagctgccctatgactctagatgggagtttcct
cgtgatggacttgtgcttggacgaatccttgggtccggtgcttttggcaaagtggtagaa
ggaaccgtatatgggttaagccattcacagccagtgatgaaagttgctgtaaaaatgttg
aaacccacagcaagatccagtgagaagcaagccctcatgtctgaactaaagataatgact
cacctggggccccatctaaacattgtcaacttgctgggagcatgcactaaagcaggtcct
atttatatcattactgaatactgcttttatggagacctggttaactatctgcataagaac
cgtgaaaatttcttaaatcgacacccagagaaaacgaagaaggatctcgatatctttggt
atcaaccctgcagatgaaagcactagaagctatgtcatcttgtcttttgaaaacaaaggc
gactacatggacatgaagcaagctgatacaacgcagtacgtgccaatgctggagatgaag
gatggttcaaagtattctgacatccaaagatcaaattatgatcacccaccttcacatgag
caaaaatcactaactgatactgaagtaaacaatttgctgtcagatgacagcagtgaaggt
ctcactgtaatggacctgctcagcttcacataccaggttgctagaggcatggagttcttg
gcttccaaaaattgtgttcatcgtgatttggctgcaagaaatgtcctgttgtcacaagga
aagattgtgaaaatctgtgattttgggttagctagagacatcatgcatgacaacaactac
gtttcatgtggcagtactttcctcccagtgaagtggatggcaccggaaagtattttcgac
aatatgtacacaacgctgagcgatgtctggtcttacggcatcttgctgtgggaaatcttt
tcactaggtggaaccccgtatcctggaatggtggtggactccagcttttacaacaaaatc
aaaagtggctacagaatgacaagacctgaacatgcaaacagcgaagtatatgagatgatg
atgaggtgctggagcagcgaaccagaaaagagaccctccttctgcagcctgagcgacact
gtggcgtccttgttacctgtggaatacaagaagagctatgaaaaggtgaaccatgacttc
ctgaagagcgaccaccctgctgttacccgaatgaaagcggaaactgaagacacttacatc
ggtgtcatgtacaaaaatgaggacaagctgaaagacagggagagtgggtttgacgagcag
agacttagctctgacagcggctatatcatccccctgccagatctggaccctgtctcagac
gatgagtacagcaagagaaaccggcacagctcccagacctctgaagaaagtgccattgag
acaggttccagcagttccacattcatcaagcgggaggacgaaacgattgaggacatcgag
atgatggacgatatggggatggattcatctgatctggttgaggacagtttcttgtaa
DBGET
integrated database retrieval system
