Acipenser ruthenus (sterlet): 117426529
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Entry
117426529 CDS
T07327
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117426529
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117426529
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
117426529
NCBI-ProteinID:
XP_033900068
LinkDB
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Position
12:complement(31121045..31174603)
Genome browser
AA seq
1987 aa
AA seq
DB search
MAQRLVPPGPESFHLFCRESLDAIEKRIAEEKAKKPKGDRRDNDDENGPKPNSDLEAGKS
LPFIYGDTPKGMVSEPLEDLDPYYMNEKTFIVLNRGKTIFRFNATPALYILSPFNPLRKL
AIKILVHSMFSMLIMLTIMTNCTFMTLSNPPDWAKNVEYTFTGIYTFESLLKILARGFCI
GKFTFLRDPWNWLDFTVILMAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRWPPAESGSNLTFSLNSTMDVN
GTVLNLTENAFNWTTYINDKTNYYFKNGHRDALLCGNGSDAGQCPEGFKCIKGGRNPDYG
YTSFDTFGWAFLSLFRLMTQDFWENLYQQTLRAAGKTYMLFFVLVIFLGSFYLVNLILAV
VAMAYDEQNQATLEEAEQKEAEFQAMLEQLKKQQEDAQAAAAAAANEYGEYSGGCGVTES
SSEASKLSSKSAKERRNRRKKRKQKYEDEEKGDTDKFHKSESEDNIKRKGFGFSIDGNRL
SYEKRYSSPHQSLLSIRGSLFSPRRYSKASLFSFRARRDVGSENDFADDEHSTFEDSESR
RGSLFVPHMQERRNSTISQTSRSSRVMLPINGKMHCNVDCNGVVSLVGGPSGPTSPVGRL
LPEATTTTETETKKKRSGSHQMSMDFLDEPTARQRALSVASILTNTMDELEESRQKCPPC
WYKFANTYLIWDCSPNWLKIKTIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPVTPEFD
NVLSVGNLVFTGIFTAEMIFKICAMDPYYYFQEGWNIFDGIIVSLSLMELGLANVDGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYR
DCVCKIDENCELPRWHMFDFFHSFLIVFRVLCGEWIETMWDCMEVASQSMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIDFTKKTLREFFQNT
CIRNKKVLNEIKPLGELHNMKDSCISNHTTVELIKEPDCHKDSDGISSNEEKNMIDESDY
MSFIHNPSLTVTVPIAMGESDFENLNTEEFSSESDIECSKEQLNQFSSSEGSTVNIQPLG
EGEPIEVEPEESLEPEACFTEGCVRKFQCCQVNTEKGKWKMWWNLRKTCFRIVEHNWFET
FIIFMILLSSGALAFEDIYIEQKKTIKIVLEYADKVFTYIFILEMLLKWVAYGFAKYFTN
AWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNTTDGERFPISVVNNKSECLMLNQS
ARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEYQPDYEVNLYMYLYFVI
FIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PMNKFQGLVFDFVTKQVFDITIMILICLNMITMMVETDDQTEQMQNNLYRVNLVFIILFT
GECVLKVVSLRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGR
ILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGIDDMF
NFETFGNSMICLFQITTSAGWDGLLAPILNRGQPDCDSEIDHPGSSIKGNCGNPSVGILF
FVSYVIISFLIVINMYIAIILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEF
AKLSNFADALEPPLRVAKPNTIQLIAMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDAL
RGQMEERFMASNPSKVSYEPITTTLRRKQEHMSAIVIQRAFRCYLIRRTVKKASYLFKEN
IKAGQNLLEREKMVIDKFNDNSTTEKTDVTPSTASPPSYDSVTKPDKYERDKEEKDDRGK
EFREYKK
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacggcttgtgccgccaggacctgaaagcttccacctgttttgccgagaatct
cttgatgctattgaaaagcgcattgcagaggagaaagcaaagaaaccaaaaggggaccgt
cgtgataatgacgatgaaaatggcccaaagccaaatagtgacttggaagctggaaaatca
ctgccatttatttatggtgacacccctaaaggaatggtttcagaacccttggaagatcta
gatccatattacatgaatgaaaaaacctttatagtattgaacagagggaagacaatcttc
cgatttaatgccacacctgccttgtacatcttaagtcctttcaatcctcttagaaaacta
gcgattaagatattggtacattcaatgttcagcatgcttatcatgttaactatcatgacc
aactgtacgtttatgaccttgagcaaccctcctgattgggcaaagaatgttgagtacaca
ttcactggaatttacacatttgaatcacttctaaaaattcttgcaaggggcttctgtata
ggtaaatttacattccttcgagacccatggaactggctggatttcactgtaatcctcatg
gcatatttgacagagtttgtggacctgggcaatgtctcagcattgagaacattccgtgtt
ctccgagcgttgaaaacaatatcagtcataccaggcctgaagacaattgtgggcgccctg
atccaatcggtgaagaagctctcggatgtaatgattttgactgtgttttgtctaagtgtt
tttgcactaatagggcttcaactatttatgggcaatttaagacaaaaatgtatacggtgg
ccacctgccgaatcgggttccaatttaactttctccttgaacagcacaatggatgtaaat
ggaacagtgttaaacttaactgagaacgcattcaactggacgacatacatcaatgacaaa
acaaattattacttcaaaaatggacatagggatgctttgctgtgtggcaacggcagtgac
gcggggcaatgccctgaaggatttaaatgtataaaagggggcagaaacccagattatgga
tacacaagttttgacacatttggttgggctttcctatcattgtttcgattaatgactcaa
gacttctgggaaaatctgtatcagcagaccctacgagcagctgggaaaacgtacatgtta
ttctttgtgctggtcattttcctgggatccttctaccttgtgaacttgattctggctgta
gttgccatggcctacgatgaacaaaaccaagcaacactggaagaagcggaacagaaggag
gcagaattccaggcaatgcttgagcaactgaagaaacagcaagaagatgcacaggctgcc
gctgctgcagctgccaatgagtatggggagtacagtggaggctgcggagtcactgagagc
tcctcagaggcatcgaaactcagctccaagagtgccaaggaacggagaaacaggcgcaaa
aagagaaaacagaaatatgaggatgaggaaaaaggggacactgataaatttcacaaatca
gaatctgaagacaacataaaaagaaaaggctttggcttttctattgatggaaacaggctt
agctatgaaaagagatattcctccccacaccagtctctgctgagtattcggggctccctg
ttttctcctcgacgctacagcaaagcaagcctgttcagcttcagagcgcgtagggatgta
ggctccgagaatgattttgcagacgacgaacacagcacctttgaagacagcgaaagcaga
aggggttcactgtttgtgccgcatatgcaggagagacgcaacagtaccatcagccagacc
agtagatcatccagagtaatgcttcccatcaatggaaagatgcactgcaatgtggattgc
aatggagtggtttcgctagtgggtggaccatcagggccaacctcacctgttggacgcctt
ctgccagaggctaccaccacaactgaaactgagaccaagaagaaaagatctgggtctcat
cagatgtcaatggactttttagatgagcctactgcaaggcaaagagctttaagtgtggca
agcattttaacaaacaccatggatgaactagaagaatcacgacaaaaatgcccaccatgt
tggtacaaatttgctaacacttacctcatatgggactgcagcccaaactggcttaaaatc
aagacgatagtgaatttaattgtaatggatccttttgtagaccttgcaatcactatctgc
attgttttgaacacattattcatggccatggagcattatccagtgaccccggagtttgac
aatgtgctgtctgtgggaaacctggtgtttactggaatcttcactgcagaaatgattttc
aaaatttgtgctatggacccatactattattttcaagaaggctggaacatttttgatggc
attattgtgagccttagcttaatggagcttggtctggcaaatgttgatgggctgtctgtc
ctgaggtcattcagactgctgagagtgtttaaattagccaagtcctggccaacgttgaac
atgctcatcaagatcattggcaattctgtgggagctcttggaaacttgactttggtgctc
gccatcattgttttcatttttgctgtggtgggaatgcagctgttcggaaagaactacaga
gactgcgtttgcaaaattgatgagaattgcgagctaccacgctggcacatgtttgatttc
tttcattccttcttgattgtgttccgagtactgtgtggagagtggattgagaccatgtgg
gactgcatggaggtagctagtcagagcatgtgcctcattgtattcatgatggttatggtg
attgggaaccttgtggtattgaatttgttcctggctttgcttctgagctcatttagtgca
gacaatcttgctgctacagacgatgatagcgaaatgaacaatctacagattgctgtggga
aggattcagagaggcattgacttcacgaaaaaaaccctcagagaattctttcaaaacacg
tgcataagaaacaagaaggttcttaatgaaatcaagccccttggagagctgcacaacatg
aaagacagctgcatttccaatcacacaacagttgagttaatcaaggagccagattgccat
aaggacagcgatggaataagcagcaatgaggaaaagaacatgatcgatgaaagtgattac
atgtccttcatccataatcctagcctcacggtgacagtgccaattgcaatgggagagtcc
gactttgagaacctcaacacagaggaattcagcagtgaatcggacattgaatgcagcaaa
gagcaactaaatcagttcagctcctccgagggaagtactgtcaacatccaaccgcttgga
gaaggagagccgatagaagtggaacccgaggaatccctcgagcctgaagcctgttttact
gaaggatgtgtacggaagttccagtgctgtcaggtgaacacagagaaaggcaaatggaaa
atgtggtggaacctgagaaaaacgtgtttcaggattgtcgaacacaactggtttgaaacg
ttcatcatctttatgatccttctcagcagtggtgcgttggcttttgaagatatttacatt
gagcagaagaagaccatcaagatcgtgctagaatatgctgataaagtctttacctacatc
ttcattttggaaatgcttctgaagtgggtggcctatgggtttgcgaagtattttaccaat
gcctggtgctggctggacttcctgattgttgatgtgtctttaatcagcttaacagccaat
gccttgggctactcggaactaggtgccattaagtctcttaggacactgcgagcattgaga
cctttaagggccctgtcacggtttgaagggatgagggtggtcgtcaatgctctccttgga
gcaattccatcaatcatgaatgtgctcctggtttgtcttatattctggctcatttttagt
ataatgggtgtgaatttgtttgctgggaagtactatcactgtgttaacaccacggatggc
gagcgcttcccgattagtgttgttaacaacaagagcgaatgcctgatgctgaaccagagt
gcccgctggaagaacgtgaaaatcaactttgacaatgtgggggccggttacctggcacta
ctgcaagtggccacattcaaaggatggatggacattatgtatgcagctgtggattcacgt
aatttggagtaccaacctgattacgaagttaatctctatatgtacctgtacttcgttata
tttataatatttggatccttcttcacattaaaccttttcattggtgtcatcattgacaac
ttcaatcaacagaagaaaaagtttgggggtcaggatatcttcatgacagaggaacagaaa
aaatactacaatgcaatgaagaagcttggatcaaagaaaccacaaaagccaattcctaga
ccaatgaacaagttccaaggactcgtgtttgattttgttacaaaacaagtcttcgatatt
accattatgattctcatctgccttaacatgattaccatgatggtagaaacagatgaccag
actgaacaaatgcaaaacaatctttacagggttaatttagtcttcattatacttttcact
ggtgaatgtgttctgaaggtggtttcactccgacactattactttaccatcggctggaac
attttcgactttgtggtggtgattctctccatagttggcatgtttcttgcggagataatt
gaaaaatactttgtttcaccaaccttgttcagagttattcgacttgccagaattggccgc
atccttcgacttattaagggtgccaaaggaatccgcacacttctctttgccttgatgatg
tcacttcctgccttgttcaacattggtctactgctctttttagttatgtttatctatgcc
atttttggcatgtcaaattttgcctatgtgaaaaaggaatctggtattgatgacatgttc
aactttgaaacctttggcaacagtatgatctgcttgtttcaaattacaacatctgctggt
tgggatggtttgctggctcccattcttaacagagggcaaccagattgtgacagcgagata
gatcatccaggtagttctataaaaggaaactgtggaaacccgtctgtgggcattctcttc
tttgtcagctacgttattatatcttttctaattgtgataaacatgtacattgccattatt
ctggaaaactttagcgtcgctactgaggagagtgcagaaccgctaagtgaggatgatttt
gaaatgttctatgaagtctgggagaagtttgaccctgatgcgactcagtttatggaattt
gctaaactctccaattttgctgatgctttggagcctccgcttcgtgtagcaaagccaaat
acaatccagctcattgccatggacctgcccatggttagtggggagcgaattcattgcctt
gacatattgtttgcgttcacaaaacgtgtgttgggggagggcggagaaatggacgctctc
cgcgggcaaatggaagaacgcttcatggcatcaaatccatccaaggtctcttatgaacca
ataactacaactctacgtcgcaagcaggaacacatgtctgccattgtcattcagagagcc
ttcagatgctacctaatcaggcgaacagttaaaaaagcctcttatttgttcaaagaaaac
attaaagcaggtcaaaacctacttgagagagaaaaaatggtgatcgataaatttaatgac
aactcaaccacagaaaaaacggatgtaacgccttccacggcttccccaccttcctatgac
agtgtgaccaaaccagacaaatatgagagagacaaagaagagaaggatgacaggggcaaa
gagttcagggagtataaaaagtaa
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integrated database retrieval system
