KEGG   Acipenser ruthenus (sterlet): 117430542
Entry
117430542         CDS       T07327                                 
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:arut01009]
    117430542
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arut03036]
    117430542
Enzymes [BR:arut01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117430542
Protein phosphatases and associated proteins [BR:arut01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117430542
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117430542
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 117430542
NCBI-ProteinID: XP_033906541
LinkDB
Position
37:938981..962991
AA seq 1551 aa
MTQPRPDEFVPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPDWQPPFACD
VDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
ADEGGFDIVCKERRWTRIALKMGFAPGKAVGSHIRSHYERILYPYNLFQSGASLLAPEPP
SKLMSLVAVPALDQCVQKPILTNDAKDREYKPHDLAQRQSVQPTETCTPARRFKRMRAEG
GCMKTEPGEPCDNKPNLRRRMGSVVVKNEMEKDIPITVKQEPVDIKEHITETEKAKSRIK
KTIPAVSIVDLYVCLVCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA
QECSKPQEAFGFEQACRDYSLRAFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTVE
EDVTVEYGADIASKEFGSGFPVRNGRFKLAPQDERYLDCGWNLNNMPVMDPSVLTHITAD
ICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLENVMKKLA
PELFESQPDLLHQLVTIMNPNTLMSHGVPIYRTNQCAGEFVVTFPRAYHSGFNQGFNFAE
AVNFCTMDWVPLGRQCVDHYRLLNRYCVFSHDEMICKIAAKADGLDVVLASVVQKDMAVM
IREEKTLREAVRRMGVIDSERMEYDLLPDEERQCVKCRTTCYLSALTCPCSPGVLVCLYH
IRDLCFCPVQNYTLKYRFSLEDLYPMMNAIKLRAESYDDWATHVNDILEAKMDKKRSLSE
FQALIEESERKTFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKFQNQLK
VDELRSFVRQLYSLPCSISQAPLLKSLLNRAEDFQQHSQKVLSEEQPRAADIQKLLDVSF
DFDMELPELPVLRGRLEQAHWLEEVQRASSEPSALSLDDMRRLIDLGVGLSPHPSVEKAM
ARLQELLTVSEHWEDKAKSLIKARPHHTLETLAAAVQEVDAIPAHLPNCVLLKDSVQRAE
EWLLEVEALQHGGRVPVLDTLSELVLRGRAIPVQLDPLSRLELLVTEVQAWKECAAKTFL
MKNSPYSLLEVLCPRCDVGMGGFKRKPKKAKEPVQCTKKKTTKLDSVCDVERALCESKDS
ASAMATLAEVRLKEMEALGSLRAANEAKLLPTADSAELKVCVCQKPPAGAMLQCELCRDA
FHSACVPSSQKGAQVWLCPTCQRSDKPPLEKILPLLAALQRIRVRLPEGDALRFVIERTV
NWQNRAQQICTSLQERVGAQAAHHRWQGTVPLTAENTKCPSDAPLSSVQEWNKTAFYTEQ
RCIPLQGLSADQEELMVEALLLQVSLPEIQQLYQILHAGLHSQQNTDHTSPAGPDCETAG
VRQQNCQGKSPSRREDGCCSPKKETASTVERKQKRRREREREGRTGEKRVKKPATSLKKL
KLNKEKSKEVHSGSKPGRELQRQGDSPSLLSDLSYSDDSEEDIAVCPAVKCQQPEGDEVD
WVQCDGSCNQWFHQICVGVSAELAEKEDYICVHCSVKDEQNKVHNGMKRGL
NT seq 4656 nt   +upstreamnt  +downstreamnt
atgacccagccccggcccgacgagtttgtcccgccgccggagtgcccggtcttcgagccg
agctgggaggaatttgccgacccgttcgctttcatcaacaagatccgtcccatcgccgag
aaaacgggcatctgcaaggtccgcccgccgccggactggcagcctccgtttgcttgtgac
gttgacaaactgcacttcaccccgcggattcagaggctcaatgaattggaggctcagacc
agagtaaaactcaatttcctggatcagatagccaaattctgggagctgcagggatgcacg
ttaaaaatcccacatgtggaaagaaagattttggatttgtaccaactgaataagttggtt
gcagatgaaggagggtttgacattgtctgtaaagagaggagatggaccagaatagcactg
aagatgggatttgcccctgggaaggctgtgggctctcacattcgctcccactacgaaaga
attctgtacccgtacaacctcttccagtccggagccagcctgctggcgcctgagccgcct
tccaaactgatgagtttagtggctgttccagctctggatcagtgtgtccagaagccaatc
ttaacaaatgatgcgaaggatcgagaatacaaaccccatgatctagcccagaggcagtct
gtacagcctacagagacctgcactccagcccgcagattcaagcgcatgagagcagaggga
gggtgtatgaagactgaaccaggagagccctgtgacaacaagcccaacctgagaagaaga
atgggctctgtagttgtaaagaacgaaatggagaaggatattcctattacagtgaaacag
gaacccgtggatattaaggagcatatcactgaaactgagaaagccaagtcgaggattaaa
aaaaccatcccggcagtgagtatagtggacctgtatgtttgccttgtctgtggcagtgga
agtgatgaagatcgcctcctgttgtgtgatggctgtgatgatagctaccacaccttttgt
ctcattccacctcttcacgatgtccccaagggagactggagatgccccaagtgcctggct
caggagtgcagcaagcctcaggaagcatttggctttgaacaagcatgcagagactactct
ctgcgtgcctttggagaaatggccgactcgttcaagtctgactacttcaacatgccagtc
catatggttcccacagagctggtggagaaggagttctggcgtttagttagtactgttgag
gaagatgtcactgtggagtatggagctgatattgcatccaaggagtttggcagcggattc
cctgttcggaacggacgatttaaactggctccacaagatgagcgttacctagactgtggc
tggaacttgaacaacatgcctgtgatggacccctccgtccttactcacattactgctgat
atctgcgggatgaagttaccctggctgtatgtggggatgtgcttctcttcattctgctgg
cacatcgaggaccattggagctattccattaactatctgcactggggggagccaaaaaca
tggtacggagccccaggctatgctgcagagcagctggagaatgtgatgaagaaactggct
ccggaactatttgaatcccagcccgacctgttacaccagcttgtgacaatcatgaaccca
aacaccctgatgagccacggtgttccaatttatcgcactaatcagtgtgctggagaattc
gtggtcacctttcccagagcctaccacagtggctttaatcagggcttcaatttcgcagag
gctgtgaatttctgcaccatggactgggtcccgctgggtcgtcagtgcgttgaccattat
cgtctcctgaatcggtactgtgtgttctcccacgatgagatgatctgtaaaattgctgcc
aaagcggatgggctggacgttgttttggcttccgttgtccagaaggacatggcggtgatg
atcagggaggagaagactctgcgagaggcagtgaggaggatgggtgtgattgactctgag
agaatggaatatgatctcctacctgatgaagagcggcagtgtgtcaagtgcaggactact
tgctacctgtctgccctgacttgcccgtgcagccctggagtgctggtgtgtctctaccat
atccgggatctctgcttctgtccagtacagaactacacactcaagtatagattttcactg
gaagacctgtatccaatgatgaatgcaataaagctgcgtgcagaatcctatgatgactgg
gccactcatgtaaatgacattcttgaagctaaaatggacaaaaagaggagtctgtctgag
tttcaagcattgatagaagaatctgaaaggaaaacatttccagacaatgatcttcttcgc
catttacgtttggtgacccaggatgcagagaagtgtgcttcagtggcacagcaactgctg
aatgggaagagacaaaccaggtatcgctctggcggaggcaagttccagaatcagctgaag
gtggatgaacttcgttcttttgtcagacagctgtacagtttgccatgcagcatcagccag
gcccccttactaaagagccttctgaaccgtgcagaggatttccagcagcacagccagaag
gtcttgtctgaggagcagccccgggctgctgacattcagaagctgctggatgtcagcttt
gacttcgacatggagctgcctgagctcccagtcctgcgggggaggctggagcaggctcac
tggctggaggaggtacagcgcgcctcctcggagcccagcgccctgtccttggatgacatg
aggaggctgattgacctgggagtgggactgagccctcacccgtcagtggagaaggcaatg
gcccgccttcaggagctgctgactgtctctgaacactgggaggacaaagctaagagcctg
attaaagcaaggccccatcatacgcttgagactctggcagcagctgttcaggaagtggac
gctatccctgctcatctcccgaactgtgtgcttctcaaagattctgtccagagggctgaa
gagtggctgctggaggtagaagcacttcagcacggtgggcgtgtgcctgtcctggatact
ctatcggagctggtgttgaggggccgagctattcctgtgcagctggaccccctgtcaaga
ctggagttgctggtcactgaggtccaggcgtggaaagagtgtgcagctaaaacctttctg
atgaagaactctccctactctcttctggaggtgttgtgtcccaggtgtgacgttggaatg
gggggtttcaaaagaaaacccaaaaaggcaaaggagccagtgcaatgcacaaagaagaaa
acgacaaaactggacagtgtgtgtgatgtggagagagccctgtgtgagagcaaggactct
gcatctgcaatggccactcttgctgaggttcggttaaaggaaatggaagcgctcggttcc
ctcagagctgcgaatgaagcgaagttgctccccactgcagactctgcggaactgaaagtg
tgtgtgtgccagaagcccccagccggcgccatgctacagtgtgaactttgcagggacgcg
ttccacagcgcgtgtgtccccagcagccagaaaggggcccaggtgtggctctgccctacg
tgtcagcgctcagacaagccccctttagagaagatcctgcccctgctggctgctctacag
cgcattcgcgtgcggctgccggagggggacgctctgcgcttcgtgattgaacggactgtg
aactggcagaacagagcccagcagatctgcacctcgttacaggagagagtcggggctcaa
gcagcacaccaccgatggcaagggacagtgcctctcactgctgaaaacacaaagtgccct
agtgatgcaccattgagctctgtgcaggagtggaacaagactgccttttatactgaacag
agatgcattcctctccagggtctcagtgctgatcaggaggagctgatggtggaagcgctg
ctcctgcaggtctccttgccagaaatccagcagctctaccagattctgcacgcaggactg
cattctcagcagaacactgaccatacctcaccagcggggcccgactgtgaaacggcagga
gtcaggcagcagaactgtcagggaaagagcccgtcacgccgcgaggatggatgctgcagt
cctaaaaaggaaactgcaagtacagtggagaggaaacagaagaggcgccgggagagggag
agggagggccggaccggggagaagagggtgaagaagcctgccacgtccctgaagaaactc
aagctgaacaaggagaaatcaaaggaggttcacagcggcagcaagcctgggagagagctg
cagaggcagggagactccccgtccctgctgtcagatctctcctactcggacgactctgag
gaggatatcgctgtctgtcctgctgtgaagtgccagcagccagagggagacgaggtggat
tgggtccagtgcgacggtagttgtaaccagtggttccatcagatctgtgtgggcgtctcg
gctgaactggctgagaaggaggactatatttgtgtccactgtagtgtgaaggatgagcag
aacaaagtacacaacgggatgaagcgaggactttaa

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