Acipenser ruthenus (sterlet): 117431071
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Entry
117431071 CDS
T07327
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117431071
04020 Calcium signaling pathway
117431071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117431071
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117431071
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117431071
NCBI-ProteinID:
XP_033907570
LinkDB
All DBs
Position
15:complement(8053774..8131980)
Genome browser
AA seq
2335 aa
AA seq
DB search
MLVILLNCATLGMFQPCEDVKCQSEWCTILQAFDDFIFAFFAVEMVIKMIALGIFGQKCY
LGDTWNRLDFFIVMAGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLEDNFKTTYNLSFLTPYYKQEEGEE
TPFICSTNRDNGMVRCPDIPRLKENRVECSLSMFYDSHQHNSMDVGNINGCINWNQYYNV
CKTGDLNPHKGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEELLKYISH
LYRKVKRRVGRLYSNWQNKRRKKVNPNSSNSGGGINRQGRRCRNKRRIRSIHHLIHHHHH
HHHHHYHISNGSPRGLRGNSEICDVMEMRSMRPGSQLMLQSPSPNLQSPSPGTESVHSIY
HADCHFQGSQVRRKSYNAAGNVKLISGINGGMNYPTIVSSMSNSRSSTMPKSKGKRNGNH
PMSLSRAAGHTSIPDPYGKMHQFVGEHGVYRTPSRLSGLNMPCAVTSNQPSLLSCELAKC
PYCASVLDNPELDLSDSDSGDSDVVYEFTQDLQRGTEHTNRQSWRKKKPKEKNKLAQCWD
LFCQKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTDALEISNIVFTSMFALEM
LLKLLAFGLFGYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPA
LRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLTMENGDTIPDRKNFDSL
LWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQA
EGDANRSDTDEDKMSTNFDDEDKCRDLHSSELKMYSLMMTPNGHVDSRASIAPPIIMRTA
ATPIPTPKSSPFMDSVHTFNESRRASSSSIDPNAYDQRSLSSTRSSPCAPWGSASNWGSR
RSSWNSLGRAPSLKRKNHSGEHESLLSGEGRGSYEDEDSDGDKSSKAGSVCGASLQHHAE
SLDARGSLDLPELLQIPMLRHHSMVEHQDCNGKALHIPHEFFLRVDNHKDEPSDYDEDID
DSYCFRIRKLLEPYKPEWCKDHEDWSLYLFSPQNQFRVMCQKVISHKMFDYVVLVFIFLN
CITIALERPDIQPHSTERVFLSVSNHIFTAIFVTETTVKVVALGFFSGENTYLQSSWNIL
DGVLVFVSVIDIIVSLASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSL
RPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGFDTKNITNKSDCLQTNYRWIRRKYNF
DNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVRNHNPWMLLFFISFLLIVSFFVL
NMFVGVVVENFHKCRQHQEAEEARLREEKRLRRLEKKRRSKEIYVSEAQRRPYYANYSPA
RLYIRTLCTSHYLDLFITFIIGINVVTMSMEHYHQPKSLDEALKYCNYVFTIVFVFEAIL
KLVAFGFRRFFKDRWNQLDLSIVLLSIMGITLEEIEMNASLPINPTIIRIMRVLRIARVL
KLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLICNDENPCEGLS
RHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECSSEDKHCLSYLPLFSPVYFVTFVLI
AQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEISRRLSASTGGRPLGPDSRASYV
GPRPDSPVQDGLRCGRPGKEDGQENLLSVRKVSVSRMHSLPNDSYMFRPVKSANTPYPLT
EVESFDGELQSGSVISMQFEAAEVDSLLQVPVTTVHSNSASPLHEKSSLPKIPAQQIASR
SPSVNRLLQRQEAIKHDSFDTHSDDLRDNLHGQSSDSLQFKVPVQSSLTLPFLRPMAVSA
HSTPQPSPLLPRRSRTSSVHTHRLVYSQHSIPSRPSSQTSSASPVSSMFDSVDPTDEEVQ
HINSSAKDWSKQSEARSHSLSPFISPTQSPVPLKNCCSATSLAGANMKDKDLKKFYSVDT
EGFLAKPSWTDDPRRHSIEICPSIDDGDSVFDQSSDDRRRSSLHGQSESPYSLGTRRKKK
MSPPCISIDPPLENENSAPAASLTKVSENSMLLRRRTPSSESTLYRDSLDLLDAQPTADQ
PSKSEKRISISCRKEHLSIPQFSFDQSDIGSMSSLSDILSDSDQSTPSSSISFDSKNETE
AASELKKPDHLKVQHTDNPETSSKGLLNVMRSPLRKHGLVRMVSTRDEDTDGSVV
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtaatcctcctgaactgtgccaccttggggatgttccagccctgtgaagatgtc
aagtgtcagtccgagtggtgcaccatccttcaggcatttgatgactttatttttgcattc
tttgctgttgagatggtcatcaagatgattgccttggggatttttggacagaaatgttac
ctgggagacacgtggaaccgtctggatttcttcattgtgatggcagggatgctggagtac
tcactggatgggcacaatgtcagcttgtctgctattcgtactgtgcgggtcctcaggcct
ctcagagctattaacagagttcctagtatgagaatactggtgaccctgctgttagatact
ctgcctatgctaggcaacgtccttctcctttgtttttttgtcttctttatatttgggatt
gtcggagtgcaattgtgggctggcctgctgaggaacaggtgtttcttagaagacaatttt
aaaacgacttacaatctatcttttttaaccccatattacaaacaagaggagggtgaagaa
accccattcatctgctccaccaatagggacaacgggatggttaggtgtccagacatccca
cgcttgaaggaaaatagagtggagtgttctctcagcatgttctacgacagccaccaacac
aacagtatggacgtgggaaacataaatggctgcataaactggaaccaatattacaatgta
tgcaagactggggacctgaacccacacaaaggagctattaactttgataatattggatat
gcctggatcgctatttttcaggtcataactttggaaggctgggtggatatcatgtattat
gttatggatgcacattctttttacaattttatatattttatattacttataatagtgggc
tcgttctttatgattaacctgtgcctggttgtgattgcaacccagttctcggagacaaag
cagcgtgaaaaccaactcatgcaggagcagcgcgcccgctatctctccaacgacagcacg
ctggccagctactcggagccgggcagctgctacgaggagctgctcaagtacatcagccac
ctctatcgcaaggtgaagcgacgagtcgggaggctgtacagcaactggcagaacaagagg
aggaagaaagttaaccccaacagtagcaacagtggtggcggtataaacagacaaggcaga
aggtgtagaaacaagcgccgaatccgatcgatccaccatctgattcaccatcaccaccac
caccaccatcatcactaccacatcagcaatggcagcccccgtggcctcagagggaactct
gagatctgtgatgtcatggagatgagatccatgagacctgggagtcagttaatgcttcag
tcgccttcccccaatcttcaaagcccctcacccggcacagagtcggttcacagcatctac
cacgctgactgccatttccaagggtcacaggtcagacgcaagtcttacaatgcagcaggg
aatgttaaactgatcagcgggattaacggaggcatgaactatcccaccatcgtctcctcc
atgtccaatagtaggtccagcacaatgccaaaatccaaggggaaaagaaatggcaatcac
cccatgagtctaagcagggcagcaggtcataccagcatcccagatccctatgggaagatg
caccagtttgtgggagagcatggtgtgtatcggactcccagccgcctctctggcctcaac
atgccttgtgcagttacgagcaatcagcccagcctgctgtcctgtgagctggccaaatgc
ccctactgtgcaagcgtactggacaaccctgagttagatctcagcgactctgacagtggc
gactctgacgttgtttacgaattcacacaggacctgcagcgcggcacagagcacacgaac
cgccagtcctggagaaaaaagaaaccaaaggaaaaaaacaagcttgcacaatgctgggat
ttattctgccagaaactgaaaaggattgtggaaagtaaatattttaatcgtgggattatg
atagcaatcctgatcaacactttgagcatggggatagagtaccatgagcagccagatgag
ttgacagatgccctggagatcagtaacattgtcttcaccagcatgttcgccctggaaatg
ctgctgaagctcctggcattcggcctctttggatacattaagaacccctacaacatcttc
gatgggatcattgttattatcagtgtgtgggagattatcgggcagtcggatggaggcctc
tcggtcctcaggacattccggctgctccgggtcctcaaactggtgcgtttcttgcctgcg
ctgagaagacagctcgtcgttctgatgaagaccatggacaacgtggctactttctgcatg
ctgctcatgctcttcatcttcatcttcagcattcttggaatgcatctttttggatgcaaa
tttagtctgacaatggaaaacggagacacaattccagacagaaagaattttgattccttg
ctgtgggcgatcgtcactgtgtttcagatcctcactcaagaagattggaatgtggtcctc
tataatggaatggcatccacttccccctgggctgctctgtattttgtggctttgatgacg
tttggaaattatgtgttgtttaacctgctggtcgctattctggtggaagggtttcaagca
gagggggatgcaaaccggtctgacacagatgaagataaaatgtcaacaaactttgatgac
gaggacaaatgcagggacttgcattcatcagaattgaagatgtactctttgatgatgacc
cctaacggacatgtggactcacgtgctagcatagccccgcccatcatcatgcgcactgct
gccacacccataccgacgcccaagagctcacccttcatggattctgtccacaccttcaat
gagtcaagacgggccagcagctcctccatcgaccccaacgcttacgaccagaggtccctg
tccagcacccgcagctccccgtgtgccccctggggctcggccagtaactggggcagccgg
cgttcgagctggaacagcctgggccgggctcccagcctcaagcggaagaaccattccggg
gagcacgagtctctgttgtctggggagggccggggcagctacgaggatgaggattcggat
ggtgacaagtccagtaaagccggcagtgtctgtggtgcgtcactgcagcaccatgcggag
tccttggatgcccgcggctctctcgacctacccgagctcctgcagatcccaatgttgcgc
caccacagcatggtcgagcaccaagactgcaacggcaaggccctccacatccctcacgag
ttcttccttcgcgtcgataaccacaaggacgagcccagtgactacgatgaggacattgac
gatagttactgcttcaggatcaggaagttgcttgagccgtacaaacctgagtggtgtaaa
gatcacgaggactggtctctatatttgttttctccacagaaccagtttcgcgttatgtgt
caaaaggttatttcccacaagatgtttgactatgtggttcttgttttcatcttcctcaat
tgtatcaccattgcactggagaggcctgatattcaacctcacagcacagagagggtgttt
ctaagtgtctctaatcacatcttcactgccatttttgttacggaaacgacagttaaggtt
gttgctctgggattcttctcgggtgagaatacctacctccagagcagctggaacattctg
gatggggtgttggtctttgtctcagtaattgatatcattgtctccttggcctctgctggg
ggagcaaagattcttgggatacttcgggttcttcgactgctgagaacactccggccgcta
agggtcattagccgagctccaggcctcaagctggtggtagagacgttaataacgtctctt
cggcccattggtaatatcgtgctgatctgctgtgcattcttcatcatattcggtatcctc
ggggtgcagctgtttaaaggaaaattttactactgtgatggatttgacacaaaaaacata
accaacaaatctgactgtctgcaaacaaactaccggtggattcggagaaagtacaacttt
gacaacttgggacaggccctgatgtcgctgttcgtgctctcctccaaggatggctgggtg
aacatcatgtacgatggtctggatgccgtggggatagatcagcagcctgttagaaaccac
aacccgtggatgctgctgttcttcatctccttcctgctgatcgtcagcttcttcgtgctc
aacatgtttgtgggcgtggtggtggagaacttccacaagtgccgtcagcaccaggaggca
gaggaggcacgcctccgagaggagaaacgtctccggcggctggagaaaaagcgcaggagt
aaggagatatacgtgtctgaagcccagcgccgcccgtactatgccaattactctcctgcc
cgactctacatccgcactttgtgtaccagccactacctggacctcttcatcaccttcatc
attgggattaatgttgtcaccatgtccatggagcactaccatcagccaaagtccctggat
gaggccctgaaatactgcaactacgtgttcaccatagtgtttgtgttcgaggcgatctta
aaactggtggcatttgggtttcgaagattctttaaagacagatggaaccagctggatctg
tccattgtacttctgtccataatgggaattacattggaagaaattgaaatgaatgcctct
cttccaattaacccaaccatcatccgcatcatgagagtgctaagaatcgcaagagttctg
aagctattaaagatggcaactgggatgcgagctttgctggatacagtggtgcaggcgttg
cctcaggtggggaatctcggcctgctcttcatgctcttgttcttcatctacgcagctctg
ggagtggagctcttcgggaagttaatttgtaatgatgaaaacccttgtgaaggtttaagc
agacacgctacgtttgagaactttggaatggcatttcttacactgttccgggtgtccact
ggggataattggaacggcataatgaaggacaccttgcgtgagtgcagcagtgaggacaag
cactgcctgagctacctgcctctgttctcgccagtgtacttcgtgaccttcgtgctgatt
gcacagttcgtgctggtcaacgtggtggtggccgtgctcatgaagcacctggaggagagc
aacaaggaggccaaggaggacgcagagatggacgctgagatcgagatggagatttcgaga
cggctcagcgcctcaacaggggggaggccgctcggccctgatagcagggccagctacgtg
gggccaaggccagactccccagtacaggatggacttaggtgtggcagaccagggaaggag
gatggacaggagaatcttctatctgtgaggaaagtttctgtgtcaagaatgcattctctg
cccaacgatagctacatgttccggccggtgaagtcagctaacaccccttaccccctgaca
gaggttgagtcttttgatggagaactgcagtcagggtctgtgatatcaatgcagtttgaa
gcagctgaagtggattctttgctccaggtcccggtgacgactgttcactcaaactctgca
tctcctctccatgagaaaagcagcctgcccaagatcccagcccaacagattgcttcccga
tctcccagcgtcaacaggcttctgcaaagacaggaggcaataaaacatgactcctttgac
acacacagcgacgatttgagggacaaccttcacggccagtccagcgacagtctacagttc
aaagttccggtccagagcagcctgactctgccattcctgcggcccatggcggtctctgcc
cacagcactcctcagccgtctcccctcctgccccgccgcagccgcacttccagcgtgcac
acccacaggctggtgtacagccagcacagcattcccagtcggccctccagccagaccagc
agcgccagcccggtcagctccatgttcgattcggtggatccaacggatgaggaggtgcag
cacatcaacagctcagccaaagattggagcaagcagtcagaggctaggagccactccctg
tccccgttcatctcccccacccagtcgccagtccccctgaagaactgctgcagtgccacc
agcctggcaggagctaacatgaaggacaaggacttgaagaagttttacagcgttgacacc
gaggggttcttggctaaaccatcatggaccgatgacccacgcaggcactccattgagatc
tgcccctctattgacgatggagactctgtctttgaccagtcctcggacgataggaggcgt
tcttctctgcacggccaatcagaatctccatactcactgggcacgcggaggaagaaaaag
atgagcccgccctgtatctctatagatcctcccttagagaatgagaactctgcccctgct
gcgtctctaaccaaagtatctgaaaacagcatgttgttgcgcaggaggacaccgtcctcc
gagtccactctttacagggactccctggaccttttagatgctcagcccacggcggaccaa
ccttcaaaatccgaaaagcggatctcgatctcctgccggaaagagcacctttccatcccc
caattctccttcgaccaatcagacatcggctctatgagcagcctttcggacatcctgtct
gatagtgaccaatccaccccttcttcctccatttcctttgactccaaaaacgaaacggag
gcggcctcagaactgaagaaacccgaccaccttaaagttcagcacactgacaatcctgaa
acaagcagtaaaggattgcttaatgtaatgagaagccctttgagaaagcacgggctcgtc
cgcatggtcagcacaagggatgaagacacagacggctcagtcgtatag
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