Acipenser ruthenus (sterlet): 117963601
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Entry
117963601 CDS
T07327
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117963601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117963601
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117963601
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GFIT
Motif
Pfam:
cNMP_binding
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
117963601
NCBI-ProteinID:
XP_034760193
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Position
22:complement(3541868..3555822)
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AA seq
820 aa
AA seq
DB search
MPKHSPDLELDHLVHEAPQLPRSPSPSSPSSAVELPNVPSYRTRSPHLPPLGVQSQVSGV
VNPGFSKEERPTGRLREGSKVSLHPAVNIEDVDSAGGSSSAPGSLSLPSIVHPSSAHAST
TLTVPGVPATARRAATDKEKKLYSQGDSVEEAETTIKAWPSQCSLQPEEEEDRAPSVTSQ
TSAIVNERLQELVKLFKGRTEKVKEKLIDPDSSSDEESPTASPAKKAPPPPPPPEVKKEE
EEEEHYCEMLCCKFKTMPWMMRLKEYRFPASIDPYTNLMYVLWLFFVTLAWNWNLWLIPV
RWAFPYQTPDNLYLWLLMDYLCDLIYILDIFIFQARLQFVRGGDIITDKKDMRENYMKSQ
RFKMDVISLFPLDLLYLKLGVVSVLRFPRLLKYSAFYEFNDRLEAILSKAYIYRVIITTG
YLLYCLHCNACLFYWASDYEGLGSTKWVYDGVGNSYIRCYYFAVKTLITIGGLPDPKTLF
EIIFQLLNYFIGVFAFSVMIGQMRDVVGAATAGQTYYRACMDSTINYMNLYKIPRSVQNR
VKTWYDYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYQIVAKVALFEGCDRQMIYDMLK
RLKSVVYLPGDFVCKKGEIGREMYIIKAGEVQVVGGPDGKTVFVTLRGGSVFGEISLLSV
GGGNRRTANVMAHGFANLFILDKKDLNEILIHYPESQKVLRRKAKKMLTKDTKKAEGGEP
KGVQHVIPPRPETPKLLKAALALTLKTRKSGSFSKLKMKKSSSVEPSSSMPVPPASPMHH
RSPVPQTKLAEDDDDTEDMVSETVDGSMVLRMSPSHTGKE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacacagcccagacctggagttagaccacctagtccatgaagcacctcaactc
ccccggagcccttccccctcctcccccagcagcgctgtagagctccccaacgtccccagc
taccggacccgcagcccccacctgccccccctcggagtccagagccaggtgtcaggggtg
gtgaaccccggcttctccaaggaagagcggcccaccggccgtctaagagagggctccaaa
gtgagcctgcacccagctgtaaacatagaagatgtagactcagctggaggctccagcagc
gcccccggatctctctcgctcccgtccatcgttcacccgtcgtcagcgcacgccagcacc
accctgaccgtgcctggagtccctgccacagccaggagggcagcaacggataaagaaaag
aagctgtattcccaaggggacagtgtggaagaggctgagactacaatcaaagcctggccc
agtcaatgcagcctgcaaccagaggaggaggaggatcgggcaccatctgtgaccagccag
accagcgccatcgtgaacgagaggctccaggagctggtcaagttgtttaagggtcgaacg
gaaaaagtgaaggagaagctgattgaccctgacagcagctcagatgaggagagccccact
gcatctcccgcgaagaaagccccgccccctcccccacctcccgaggtgaagaaggaggag
gaggaagaggagcattactgcgagatgctgtgctgcaaattcaagaccatgccctggatg
atgcggctgaaggaatatcgcttccccgcaagcatcgacccctacaccaatctgatgtac
gtgctgtggctgttctttgtgaccttggcctggaactggaacctgtggctgatccccgtg
cggtgggcattcccctaccagactcccgataacctttacctgtggctgctcatggactac
ctgtgtgacctcatctacatcctggatatcttcatcttccaggcccgcctgcagtttgtg
cgcggcggggacattatcactgacaaaaaggacatgagagaaaattatatgaaatcacaa
agattcaagatggatgtgatttcccttttccccctggatctgctgtatttaaagctgggt
gtggtatcagtcctacgatttccacggttattaaaatatagcgccttctacgagtttaac
gaccgtctcgaggcaattctgagtaaagcatacatttacagagttatcataacgactgga
tatttactgtactgcctgcactgcaacgcctgtctgttttactgggcatctgactacgaa
ggtcttggatcaacaaaatgggtttatgatggagtgggaaacagttatatccgatgttac
tactttgccgtgaagactctgatcaccatcgggggactgcccgacccaaagaccctcttc
gaaatcatcttccagcttctcaactacttcattggagtgttcgctttctccgtcatgatt
ggtcagatgagagatgtggtcggggcagcgactgccgggcagacttattaccgagcctgc
atggacagcaccatcaactacatgaacttgtacaagatccctcgcagtgttcagaatcgg
gtcaagacctggtacgactacacctggcagtcccagggcatgctggatgagcaggaactg
ctggtgcagctcccggataagatgagactggacatcgctgtcgatgtcaattaccagatc
gtagcgaaggtggcgctctttgagggttgtgaccgacagatgatttatgacatgctgaag
aggttgaagtctgtggtgtacctgccgggggattttgtctgtaagaagggggagattgga
agggagatgtacatcatcaaagccggggaggtgcaggtggtagggggtccggatgggaag
accgtctttgttacactgcgaggcggatctgtgttcggggaaatcagcctgctgtctgta
ggaggtgggaacaggcggacagctaacgtgatggcacacggtttcgccaacctgtttatc
ctggacaaaaaggacctgaacgagattctcatccactaccccgagtcgcagaaggtgctg
cgcagaaaggccaaaaaaatgctaaccaaagacaccaaaaaggcagaggggggtgagccg
aagggggtacagcacgtgatcccccctagacccgagacccccaaactcttaaaagctgca
ctcgcactcacccttaaaaccagaaagagcgggtccttcagcaagctcaagatgaagaaa
tccagctctgtggagccttccagctcgatgcccgtgccgcctgcctccccaatgcaccat
cgctcgcccgtcccgcagaccaagctagcggaggatgacgatgatacagaggacatggtg
tcggagaccgtggacggctccatggtgctccgcatgagcccttcacacacaggcaaggag
tag
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