KEGG   Acipenser ruthenus (sterlet): 117965584
Entry
117965584         CDS       T07327                                 
Name
(RefSeq) CD209 antigen-like
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03260  Virion - Human immunodeficiency virus
arut03264  Virion - Flavivirus
arut04145  Phagosome
arut04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    117965584
   03264 Virion - Flavivirus
    117965584
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117965584
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    117965584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arut04131]
    117965584
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:arut04054]
    117965584
   04090 CD molecules [BR:arut04090]
    117965584
   04091 Lectins [BR:arut04091]
    117965584
Membrane trafficking [BR:arut04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    117965584
Pattern recognition receptors [BR:arut04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   117965584
CD molecules [BR:arut04090]
 Proteins
  117965584
Lectins [BR:arut04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   DC-SIGN subgroup
    117965584
SSDB
Motif
Pfam: Lectin_C CENP-F_leu_zip CCDC144C Fez1 Filament DUF848 Nup54 DUF5134 DUF1664 DUF4763
Other DBs
NCBI-GeneID: 117965584
NCBI-ProteinID: XP_034766302
LinkDB
Position
34:complement(3165417..3232812)
AA seq 377 aa
MAKERFHVIRNPTTGEISEDTSKKEKPKRDRNVCGSKSIVALYILLMATSMVWMILLSKA
FAKHSEISAEIENLRNSRTILKGNDSEISAEIENLRNSRTNFERKCVFSFSDSEISAEIE
NLRNSRTILKGNDSEISAEIENLRNSRTILKGNDSAIFAQLQELRNTLISLKANDTKRPS
DLQAIQKDVSSLKTAETKRSSDLQALQQEVSSLKTEVTEEIQNLRVEQTLLKEKDSKITT
NVTNLEKYVSKVCIIKTCPCEWTLFSGKCYYFSNENRDWKKAREFCQSQDSDLTVINSDE
ELNYLKGKVRVVHLVGMSDLETEGVWKWLDGSLVDGRMWNPGEPNNQGKEDCGEMSNGKL
NDIPCNLKQRWICEKTL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggccaaagaacgctttcatgtcatacgcaacccgacaacaggcgagatcagtgaagac
accagtaaaaaggagaaaccgaagagagatcgcaatgtctgtggtagcaaatccattgtt
gctctctacattctgttgatggctacctcgatggtgtggatgatcctgctctccaaggca
tttgcaaaacattcggaaatctctgctgaaatcgagaacctgagaaactcgaggacaatt
ttgaaaggaaatgattcggaaatctctgctgaaatcgagaacctgagaaactcgaggacc
aattttgaaaggaaatgtgttttttctttttcagattcggaaatctctgctgaaatcgag
aacctgagaaactcgaggacaattttgaaaggaaatgattcggaaatctctgctgaaatc
gagaacctgagaaactcgaggacaattttgaaaggaaatgattctgcaatatttgcccaa
ctacaggagctgcggaatacactgatcagcctgaaagcaaacgatactaaacggccttca
gatctccaggcaatacaaaaggatgtttctagcctcaaaacagcagagactaagcggtct
tcagatctccaggcattacagcaggaagtgtctagcctcaaaacagaagtcactgaagaa
atacaaaacctgagagtggagcaaaccctcctgaaggaaaaagattctaagattacgaca
aatgttacaaacttggaaaaatatgtttctaaagtgtgcatcatcaagacctgcccttgt
gaatggaccttgtttagtgggaaatgttactacttttccaatgagaacagagactggaag
aaagcaagagaattctgtcaatcccaagactcggaccttacagtgatcaacagtgatgaa
gagctgaactatttaaagggcaaagttcgagtggttcacttggttggaatgagcgatttg
gagacagaaggggtctggaagtggttggatgggagtttagtggatgggagaatgtggaat
cctggggaaccaaacaatcaaggaaaagaagactgtggtgagatgagcaacggcaagctg
aatgacatcccttgcaacctaaaacaacgatggatctgtgaaaaaacactttaa

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