Alosa sapidissima (American shad): 121677412
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Entry
121677412 CDS
T11137
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121677412 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121677412 (atf6)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
121677412 (atf6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
LRRFIP
Cep57_CLD_2
bZIP_Maf
ZapB
AdoHcyase
Motif
Other DBs
NCBI-GeneID:
121677412
NCBI-ProteinID:
XP_041912044
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All DBs
Position
12:complement(30185829..30256476)
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AA seq
653 aa
AA seq
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MTSGLTLDFEDHLDHQDTTMSNVVTGNICIDQDGEWDISLFDELEGLGDADELLRALEGD
AYAGEVPDLDFDMDLPPWSPDTSSTCTDGDMTVASLSPAHTISSVPSPTSLEAHSPNSLS
DEALSPQPQASPLSVCSDSSGFSELPPERPPPKRTNPTPRAKPVKRPIQPSPKVSIQPRP
VITAMPLPTAAAAPLQAKTIILQPLQSIQSLQPVLPVVKPARVAIKPAPPAARHMIFPQP
TQVLHIQTAQTVPTRVVTMPTLVPDARIPAAAPPVVTMTLQSPASVQSSTHSSDDDSNAS
RRQMRMIKNRESASLSRKKKKEYLLTLEARLKIALSENAQLKNENGTLKQQLNGLISENT
VLKTTAPKRRAVCLMVLAVFLVFNMGPMSLYRDSDGSKVPVSRVHTGRHLLELPNPHTPE
EVLVSSSVEESVAEEKALMVVRKSPLVFGAPPPCQPPVNRTKCIKLAHELRGWVHRHEVE
RTKSRRQSNTQTKSRTILKESGNKDEVTQILPVQYTDSAERSSGNELQVYYAPHRTYNDF
FDEINRRGDTFYVVSFRRDHLLLPATSHNKGSRPKMSVLLPAMNVNDSVIKDKEFEVMMQ
IDCEVMDTRILHVKTSSIPPFLRANQTHNDTLYHPSPTSAQATPTVSVLVGSA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaggtttaacgttagacttcgaagatcacctagatcatcaggatacaacaatg
agtaacgttgttacggggaacatttgcattgaccaggatggggaatgggacatcagcctg
tttgatgagctggagggccttggggatgcagatgagctcctgagagctctcgagggggat
gcgtatgctggcgaggtccctgatctggacttcgacatggacctgcctccctggagccca
gacaccagcagcacctgcacagatggggacatgactgtggcttcgctctctccagcgcac
accatcagctcagtgccctccccaacgtccttggaggcccactctcccaactccctctcg
gacgaggcgctctctccccagccccaggcgtccccactctctgtctgctcagactccagt
ggcttctcggagctgccccctgaaagaccaccacctaagaggaccaatccgactcccaga
gccaagccagtgaagaggcccattcagccgagccctaaggtgtccatccagcccaggcca
gtgatcacagctatgcccctgcccacagccgccgctgcccccctgcaggccaaaaccatc
atcctgcagccgttgcagtccatccagtccctgcagcctgtgctgcctgtagtcaagcct
gccagggtcgccatcaaaccagctccccctgcagctcgtcatatgatatttccccagccc
actcaggtgctccacatccaaacagcgcagaccgtcccgacccgagtggttaccatgcca
acgctggttccggacgcacgcatacctgctgcagccccacccgtggttaccatgacgctc
cagagtccagcctccgtccaaagctctacccacagctctgatgacgactcgaacgcatca
cgccggcagatgcgcatgatcaagaaccgtgagtcagcgtccctctcacgcaagaagaag
aaggagtacctgctgacgctggaggcccgcctgaagatagcgctgtccgagaacgcccag
ctcaagaacgagaacggcaccctcaagcagcagctgaacggcctcataagcgagaacact
gttttgaaaaccactgcccccaagaggcgggctgtgtgtctcatggtgcttgcggtcttc
ctggttttcaacatgggaccaatgagtctgtacagagactccgatggttccaaagttcca
gtaagtagagttcacactggaaggcatctgctggaattgccgaatccacacacacctgag
gaagtgctggtgtccagcagtgtggaggagtctgtggcagaggagaaggctctgatggtg
gtgaggaagagccccctggttttcggtgcgccgccaccctgccagccacccgtcaacagg
acgaagtgcatcaagctggctcatgaactgagaggatgggtgcacagacatgaggtggag
cgcaccaagagcagacggcagagtaacacacagactaagagcaggaccatcctgaaggag
agtgggaataaggatgaggtgacccagattctgcccgtccagtacactgactcagcagag
agaagttcaggtaatgagctgcaggtgtattacgccccgcaccgcacctacaacgacttc
tttgatgagatcaaccgaaggggagacaccttctacgtggtatctttccgccgggatcat
ctgcttcttcctgccaccagccacaacaaaggaagtcggcccaagatgtccgtgttgctg
ccggctatgaacgtcaacgacagtgtcattaaagacaaggagtttgaggtgatgatgcag
atcgactgtgaagtgatggacacccgcatcctgcacgtcaagacctccagtatcccacca
ttcctgcgtgccaatcaaacccacaatgacactctctaccaccccagccctaccagtgcc
caggccacacccaccgtcagcgtcctggttggctccgcgtaa
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