Alosa sapidissima (American shad): 121678418
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Entry
121678418 CDS
T11137
Symbol
si:ch211-129c21.1
Name
(RefSeq) semaphorin-4E
KO
K06521
semaphorin 4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
asad04090
]
121678418 (si:ch211-129c21.1)
CD molecules [BR:
asad04090
]
Proteins
121678418 (si:ch211-129c21.1)
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GFIT
Motif
Pfam:
Sema
I-set
ig
Ig_3
Ig_2
PSI
V-set_CD47
Sema4F_C
MU117
Motif
Other DBs
NCBI-GeneID:
121678418
NCBI-ProteinID:
XP_041913896
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Position
12:complement(19211997..19232627)
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AA seq
794 aa
AA seq
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MPFLPLLALLCAPLLTIAHGQPTTDTLVPRKSILHQDAHAKLFQEAGVWNYTTMLLREDL
GLLMLGAREAIYALNISDISEMKSAVHWGVPEDKQKECTYKGKNADIECRNYIRTLHKIN
TTSMYVCGTNAFSPTCDYLTFADGQLKLRDMPEEGKGKCPFDPFQRYSSLMVGNDLYSAT
SINFLGSEPVVLRSSQTTLRTEFKSSWLNEPNFVYMDLIPESEDSTDGDDDKVYLFFSEN
AVEYDFYNKLMVSRVARVCKEDMGGQRTLQRKWTSFLKARLDCSVPEPSLPYIVQDVFLL
SGDIWESGVFYAVFTPQSESSDLSAVCAYSISAIKKVFSTGKYKTPVSVETSHIKWVMFS
GDVPSPRPGACINDAARSQGMTRSLDLPDKTLQFIRDRPLMDDAVRPLTGTPLLLKRGAA
FTRIVVDNVVALDGQTHPVMFIGTENGFVQKAVNYDGEMHIIEEVQLFETSEAIRVLRLS
LSTGQLYAGTESGAVQMPLSDCGRYISCLDCVLARDPYCAWSLTTSLCSTLLRSPDTDDR
NLIQSLKEGDASSCPKSAPMRARAVHVSPGNNIQLDCQVDLNLAQVNWHFNGQLLQTSAK
HYLYSQGLLIFSVSASDMGEYTCQATEHVGVHEYPQVMAAYKLLPPQTVTSQPGEEDLGD
PEPEPSVTEPTVSQITAPKNTPSVGKGEVTPDRPQPNAKVGQITGLQVAVVVLTLILVAV
VGAVMYYRKRLIRHQSAGGTTSNGAAYQPASQGKTDDPRTDQNFNNSTTVTFSGKGTSNG
PVIAISRIEGESEI
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcttcctctgctggctttactgtgtgcacctcttctcaccattgcacatggt
cagcccaccactgacacccttgtgcctcggaagagcatcctccaccaggatgcacatgcc
aagttgttccaagaggctggcgtgtggaactacacaaccatgctgctgagggaagacctg
ggcctgctgatgcttggggccagggaagccatctacgccctcaacattagcgacatctct
gagatgaaatctgctgtacattggggtgttccagaggataaacagaaagagtgcacctac
aagggaaagaatgctgatattgagtgtcgaaactatatccggactcttcataaaatcaac
accaccagtatgtatgtgtgtgggaccaatgccttcagccccacttgtgactacctgaca
tttgctgatggacagctgaaactaagggacatgcctgaagaggggaaagggaagtgtcct
ttcgatcccttccagagatactcctcccttatggtcggtaatgacctttactctgccact
tcaatcaacttcctgggctctgagccagtggtgctgcgcagctcccagacaacactccgc
accgagttcaaaagctcctggctcaacgaacccaactttgtgtacatggacctgatccct
gagagtgaagacagcacagatggggatgacgataaggtctacctgttctttagcgagaac
gccgtggagtacgacttctacaacaagctcatggtgtctcgagtggcccgagtctgcaag
gaggacatgggcggccagcgaaccctgcaaaggaagtggacgtccttcctgaaggcgcgt
ctggactgctctgtgcctgaacccagcctgccctacatcgtccaggacgtcttcctgctc
agcggagatatctgggagtctggcgtcttttacgcagtcttcaccccccagtccgaatca
tctgacctgtctgctgtgtgcgcgtacagcatctcggccatcaaaaaggtgttctccacg
ggcaaatacaagaccccggtgtctgtcgagacgtcccacattaagtgggtgatgttcagc
ggggacgtgccctccccccggccaggcgcgtgcataaatgatgcagccagaagccagggc
atgacccgctcactggacctgccggacaagacgctgcagttcatccgggaccggccgctg
atggacgacgctgtgcggcccctgaccgggacccctctgctgctgaagaggggggcagct
ttcacccgcatcgtggtagacaacgtggtcgcactggacggccaaacgcaccctgtgatg
tttatcggcactgagaatggctttgttcagaaagctgtgaactacgacggggagatgcat
atcattgaggaggtgcagctgtttgagacgtcagaagccattagggtcctccgtctgtcg
ttgagtacgggccagctgtatgcgggcacggagtccggtgctgtgcagatgcccctgagt
gattgcggtcgctacatctcctgtctggactgcgtgctggccagagacccctactgcgcc
tggagcctcacaacttccctctgctccaccctgctccgctcaccagacacagacgacagg
aatttgattcagagcctgaaagagggagatgcgtcctcttgtccaaagtcagcccctatg
agggccagagctgtacatgtgtcccccgggaacaacatccaactggactgccaggtggac
ttaaacctagcccaagtgaactggcacttcaacgggcagctacttcagacgtctgcgaag
cactacctctacagccagggccttctcatcttcagtgtctccgccagcgacatgggggag
tacacttgccaagccaccgagcatgtgggcgtgcacgagtaccctcaggtaatggccgcc
tataaactgctgccccctcagacagtgacttctcagcctggcgaggaggatctgggcgat
cctgagccggaaccaagcgttactgaacccactgtcagccagatcacggcacccaaaaac
accccgtcagtcggcaaaggcgaagtaactccagatcggccccaacccaatgcaaaagtt
ggccagattacaggactgcaggtggcggtggtggtgctcaccttgatactggtggctgtg
gtcggggcggtcatgtactacagaaagcggctaatacgacatcaatcggcaggtggtacc
accagcaacggtgctgcctaccagccggcctcccaaggcaagacggacgatcctagaact
gatcagaacttcaacaattccactactgtgactttcagtgggaaaggcacaagcaacggc
cctgttatagcaatatccaggattgaaggggaatcagagatttga
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