Alosa sapidissima (American shad): 121688333
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Entry
121688333 CDS
T11137
Symbol
abcf2b
Name
(RefSeq) ATP-binding cassette, sub-family F, member 2b
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121688333 (abcf2b)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121688333 (abcf2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_28
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_16
AAA_33
NACHT
VapE-like_dom
AAA_14
Dynamin_N
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
121688333
NCBI-ProteinID:
XP_041923769
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All DBs
Position
17:complement(12499465..12510400)
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AA seq
610 aa
AA seq
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MPSDLAKKKAAKKKEAAKARQRVKKTEEVNGEGDQENQQNGTVNGDVASLTKELDEFELR
KMEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTGKSM
LLSAIGHREVPIPEHIDIYHLTREMEPSEKTALQCVMEVDEERLKLEKEAERLAHEDAEC
EKLMELYERLEELDADKAAVRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIK
PFMLLLDEPTNHLDLDACVWLEEELKSFKRILVLISHSQDFLNGVCTNIIHLHQRKLKYY
TGNYDQYVKTREELEENQMKRFNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLQKM
VASGLTERVVNDKTLSFYFPPCGKIPPPVIMVQNVSFRYSEDTPCIYKTLEFGIDLDTRV
ALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMKC
YPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTNH
LDIETIDALAEAINEFEGGMMLVSHDFRLIQQVANEIWVCEKQTITKWNRDILAYKEHLK
SKIDKQTHDV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgacctggccaagaagaaggctgcgaaaaagaaggaggcagccaaggctcgc
caacgtgtcaaaaagacagaggaggtgaatggcgagggagatcaagagaaccagcaaaat
ggaactgtcaatggagatgtggcgtcactcacaaaggagctggatgagtttgagctgcgg
aagatggaggcgcgagccgtgactggggtgctggcgtctcaccccaacagcacggatgtg
cacatcagcagcctctcgctcactttccacggccaggagctcctgagcgacaccagcctg
gaactcaactcgggccgccgctatggactcatcggcctcaacggcacaggcaagtccatg
ctgttgtcagctattggtcatcgcgaggtccccatccctgagcatattgacatctaccac
ctgacacgtgagatggagcccagtgagaagactgcactgcagtgtgtcatggaagtggat
gaggagaggctcaagctggagaaggaagctgaacgactagcacacgaagacgctgagtgt
gagaagctgatggagctgtacgagcgcctggaggagctggacgcagacaaggcggcggtg
cgcgcctcccgcatcttgcacggcctgggcttcaccccggccatgcagcgcaagaagctc
aaggacttcagtggaggctggaggatgcgcgtggcgctggcccgagctctgttcatcaag
cctttcatgttgctgctcgatgagcccactaaccacttagacttggatgcctgtgtgtgg
cttgaggaagagctcaagtcgttcaagcgaatcctggtcctcatatcacactcacaagac
ttcctgaacggtgtctgcactaacatcatccacctgcatcaaaggaaactgaagtattac
acgggcaactacgaccagtatgtgaagaccagagaggagctggaggagaatcagatgaag
cgcttcaactgggagcaggaccagatctcacatatgaagaactacatagcacggtttggt
cacggctctgccaagctggccaggcaggcacagagcaaggagaagaccctgcagaagatg
gtcgcctctggcctgactgagcgagttgtcaatgacaagacgctgtcattctactttcct
ccctgtgggaagatcccgcctccggtcatcatggtccagaatgtcagcttcagatactca
gaggacacaccatgtatatacaaaaccctggagtttggtattgatctggacaccagagtg
gctctggtgggtccaaatggcgctggcaaatccacactgctcaaactactgatgggagag
ttgctccccacagatggtatgatcaggaaacactcacacgtcaagattggcagatatcac
cagcacctgacagagcagctggagctcgacctgtctcctctggagtacatgatgaagtgc
taccccgagatcaaagagaaggaagagatgaggaagatcatcggtcgctacggcctgacg
ggaaaacagcaggtgagtcccatcaggaacttgtcggacgggcaaaagtgccgtgtgtgc
ttcgcctggctggcttggcagaacccccatatgctgtttctagacgagcctactaatcat
ctggacattgagaccatcgatgcactggcagaagccatcaacgaatttgagggcggcatg
atgctagtcagccatgacttccgactcattcagcaggtggctaatgagatctgggtgtgt
gagaagcagactatcaccaaatggaacagagacatcttggcatacaaggagcacctaaaa
tccaaaattgacaaacagacacatgacgtctga
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