Alosa sapidissima (American shad): 121689543
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Entry
121689543 CDS
T11137
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121689543 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121689543 (dysf)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Others
Ferlins
121689543 (dysf)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121689543 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
Ferlin_C
FerA
FerI
PI3K_C2
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
121689543
NCBI-ProteinID:
XP_041925322
LinkDB
All DBs
Position
18:12078312..12152337
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AA seq
2130 aa
AA seq
DB search
MLRVFILCAENVLTHDQDISDAYCSVTYEGTKKKTKVVKNNVNPVWNEGFEWDLKGVPLD
SGAQIHVVVKDHEKMGRNRFLGECRVSLRDVLNSPNLAATFTVSLVDTKKNNTGATVTLQ
VSYIPPPGMAPIFQPPPQPEAVHTPVELDTVTVFSLDTMGEDDTESMLMMETVEEPEPMP
GTPGPQEPGVPTAPPKKAPPNFNPSLKKKKRHSTSKAPLSNKPQDLQVRVRIIEGRQLPG
VNIKPVVKVTVGGQTKRTRIRKGNNPFFDETFFLNFYETPSDLFDEPIFITVLDSKSLRT
DSVVGEFKMDVGMVYHEHRHAFLRKWLLLSDPDDLSAGARGYLKVSLFVLAAGDEPPMDR
KEGVEEKEDIEGNLLRPAGLTLRGAIFTLRVFRAEDLPQMDDAFMDGMKQILGFDSNRKN
LVDPLVEVNFAGKTICSKILEKNANPQWNQSLTLPVRFPSMCEKMRIRVLDWDRASHNDV
IGTLNLCMSKISAPGGEIEDDMSTRTLPHIMDDSVGFLPTFGPCYVNMYGSLREFSVLTD
PNEVLNLGKGEGVAYRGRVLVELSTKLVDRGEHRVEDIPFDDLLVVEKFMRKRKYSLFAS
FYSATLLQDVDDAIQFEVSIGNYGNKFDHTCLPLASTTGFSRAVFDGCHYYYLPWGNVKP
VVVLSSEWEDISPRIEALNMLLSTAERVESNLQQVQLELKAGNDLEDVEAKLVQLLDDVI
ADCSEELPEIDDWPCVTALDRSLRNLRKVNLQQIVEAALSLKHGAATDVSMVLDLAEDWA
LRLRSLAEEPQNSLPDIVIWMLQGDRRVAYHRIPAHQVLFSQGYCGKHCGQLQTVLMKYP
QDVEGGAKIPAQLRVKVWFGLAADVKNFNQFAEGKLSVFAETYENQTKLALVGNWCTTGL
SYPKFSDVTGRVKLPKETFKPSPGWNWGGDWFISPEKTLLYDTDAGHMSFVEEVFENQMR
LPGGQWIGMPEGFTDVNGEKAIPKEEIECPPGWVWEDVEWSEDLNRAVDDQGWEYGITIP
PDRRPKAWVPAEKMYHTNRRRRWVRLRRRDLQKMEALRKQRPDESDLEGWEYASLFGWKF
HLKPRKTDSFRRRRWRRRMEPLEKTGPAAIFALEGSLGSVTEDRNDDKSVTTTFGVNRPT
ISCFFDSGARYHLRCYLYQARDLIAMDKDSFSDPYAIVSFLHQSQKTVTVKNTLNPTWDQ
TLIFYEVEIFGDCDITDKNPPNIVVELYDQDTYGADEFMGRCVCQPSMVASPPRLAWFPV
QRSGKPAGELLAAFELIRREKASIHHIPGQEGDIMPPAHIMDELILPGFLSENQQQWPEE
SDLPYPPPQREPNVFMVPQGIRPVLQRTAIEILAWGLRNLKSFQMASVTSPSLQVECGGR
VVQSCVIRNTKKNPNFDVNTLFIDVRLPQEELYMPPLVIKVIDNRQFGRKPVVGQCTIRY
LEEFRCQEEDLERDPTEDDIGAMAPTPRDDILIDIDDKEPLIPGQLADGTSSAIINISSS
RSSLHMIQWEDEFMDWWSKFYASTGERNKCGTYLEKGLDTLQIYDRELERVDGFEKLADF
CQTFKLYRGRTQDESEDPSVVGEFKGMFKIYPLPDDPSTPMPPRQFSLLPPNGTAECLVR
VYIIQASGLQPKDTNGKCDPYVKITMGKKTISDQDHYIPCTLDPVFGRMFELSCTLPLEK
DLKIVLYDYDMLTKDEKIGETVIDLENRFLSRYGGRCGLQQSYCVSGVNQWRDQLKPTLL
LQRLCERRSYRPPVYKPDSVHFRGLEYTAADLGDSRYAGEALTPNPHLGPLQERLALLIL
RRQGLVPEHVETRRLYSPLQPDIEQGRLQMWVDIFPKSFGPPGPPFNITPRKAKKFFLRC
VIWNTSDVILDDVSLSGEKMSDIYVKGWLHGHEGNKQKTDVHYRSLGGEGNFNWRFLFPF
HYLPAEQLCVVDRKEHFWSLDKAEAKLPPKITIQIWDNDKFSFDDYLGCLDMDLNHMLRP
AKSAEKCTLDLLHQVPEKLVSLFEQKTVKGWWPCVCDSNGEKVLAGKVEMSLEIVSEHEQ
EERPAGQGRDEPNMNPHLEDPQRPDTSFLWFSSPYKTMKYIIWRRFKWLILLFVILFFIL
LFAGVFLYSFPNYAAMKLVSPFGGGPKGTQ
NT seq
6393 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgtgttcatcctatgtgctgagaatgtgctgacgcacgatcaggacatcagc
gatgcctactgctccgtcacatatgaagggacgaagaagaagaccaaagttgtcaaaaac
aatgttaacccagtatggaatgagggctttgagtgggacctgaaaggagtgccattagac
tctggtgcacagatccatgtggtggtcaaagaccatgagaaaatgggcaggaacaggttc
ctgggcgaatgccgagtctctcttcgagatgtcctcaactcccccaacctggcagcaacc
ttcaccgtgtccttagtagacaccaaaaagaacaacacaggggctacagtgaccctgcag
gtctcctacattcctcctcctggaatggccccgatctttcagcctcctccccaaccagag
gccgtgcacacgcccgtagaactggacactgtgacagtcttctcgttggacaccatgggc
gaggatgacacggagagcatgctgatgatggagacggtggaggagccggagcccatgcca
ggcaccccggggccccaggagccaggagtgcccaccgccccgcccaaaaaagccccccca
aacttcaaccccagtctgaagaagaagaagcgccatagcacgagcaaagcacccctatca
aataaaccccaggacctgcaggtacgggtacgaattattgagggtcgacagctgccaggt
gtcaacatcaaacctgttgtgaaggtcactgttggtggacagacaaagaggactcgtata
cggaaaggcaacaacccgttctttgatgagacgttcttcttgaacttctatgaaacacca
tcagacctgtttgatgaacctatattcatcacagtgctggactccaagtctttgcggaca
gattctgtggttggtgaattcaagatggatgtgggcatggtgtatcacgaacacagacat
gcattcctcaggaagtggctgctgctctctgaccccgatgacctctcggcaggtgccagg
ggttacctgaaagtcagtctgtttgtgctggctgctggcgatgaaccaccaatggataga
aaagagggtgttgaggagaaggaggacattgaggggaatctgctgcgccctgcggggctc
acccttagaggagccattttcacactccgagtgttcagagcagaagatctcccgcagatg
gatgatgccttcatggatggcatgaaacagattctaggatttgattctaacaggaaaaac
ctggttgatcctcttgtggaggtcaactttgctgggaaaacgatctgcagtaagatcctg
gagaagaacgccaatccacagtggaatcagagcttgactctccctgttcggtttccttct
atgtgtgagaagatgaggatccgtgttttagactgggatcgagctagtcacaacgacgtg
attggaacattaaacctgtgcatgtctaagatctcagccccgggaggagagatagaagat
gatatgtctacaaggactctcccgcacatcatggacgacagtgtgggtttcctgccaacg
tttggaccctgttatgtcaacatgtacgggagtcttcgtgagttcagtgtcctcactgac
cccaatgaggtcctcaacctgggcaagggtgaaggagtggcgtaccgtggccgtgtgcta
gtggagctcagcaccaagctggtggaccggggggagcatcgggtggaggacatccccttt
gatgatcttctggtggtggagaagttcatgcggaagaggaagtactccctcttcgcatcg
ttctattccgccactctcctgcaggatgtggatgacgctattcagttcgaggtcagcatt
ggtaactacggcaacaagtttgaccacacctgccttcctttggcctctaccaccgggttc
agcagggctgtgttcgacggctgtcattactactatttgccgtggggaaacgtgaagcct
gtggtggtcctgtcctcagagtgggaggacatcagcccacgcattgaggctcttaacatg
ctgcttagtactgctgaacgtgtggagtccaacctgcagcaggtgcagctggagctgaaa
gcaggaaatgatctggaggacgtggaagcaaagctggtccaactcctggacgatgtcatt
gcagattgcagtgaggagctgccggagatcgatgactggccgtgtgtgaccgcactggac
agatccctgagaaacctgcgcaaggtgaacctgcagcagatcgtggaggcggcgctgtca
ctcaaacacggagcggccacggacgtgagcatggtactggacctagctgaggactgggcc
ctgagattgcgcagtttggcagaagagccccaaaacagcctgccagacatcgtgatctgg
atgctccagggggaccggcgggtggcgtaccaccgcatccctgcccaccaggtgctcttc
tcccagggctactgtgggaaacactgtggccagctccagaccgtcctcatgaagtaccca
caggacgtagagggcggtgctaagatcccggcgcagcttcgagtgaaggtttggtttggt
ttggcggcagacgtgaaaaacttcaaccagttcgccgaagggaaactgtcggtgtttgcc
gagacgtatgagaaccagaccaagctggcgctggtggggaactggtgcaccacagggctc
tcctacccaaagttcagcgacgtgaccggcagagtcaagctcccaaaggagaccttcaaa
ccctcaccaggctggaactggggtggagactggttcatcagcccagagaaaacgttgctg
tatgacactgacgcaggacacatgagttttgtggaagaggtttttgagaaccagatgcgg
ttgccagggggacagtggattggaatgccagaaggattcactgatgtgaatggggagaag
gccattcctaaagaggagatcgagtgtccgccaggttgggtgtgggaggacgtggagtgg
agtgaggacctgaaccgtgctgtggacgaccaagggtgggagtacggcatcaccattccc
cccgaccgccggcccaaggcttgggtcccagcggagaagatgtaccacaccaaccgcagg
aggcgctgggtccgcctgaggaggagggatctgcagaagatggaggccctgagaaagcag
cgtccagatgagtcagacctggagggctgggagtacgcgtctctgtttggctggaagttc
cacctaaagccgcgcaagaccgactcgttccgccgccgccgctggcgccgccgcatggag
ccgctggagaagacggggccggcggccatctttgccctcgagggctcactggggagcgtg
acagaagatagaaacgatgacaagtctgttactacaacctttggtgtcaaccgtccgacc
atatcttgcttttttgacagtggagctcgctatcaccttcgctgttacctgtatcaggca
agagatctgatcgccatggataaggacagcttctcagatccctatgcgattgtgtccttc
ttgcatcaaagccaaaagaccgtaacggtgaagaacacactcaatcctacctgggaccag
acgctcatcttctacgaggtggagatctttggagactgtgacatcactgacaagaacccc
cccaacattgtggtcgagctgtatgaccaggacacctatggggcagatgagtttatgggc
cgctgcgtgtgccagccctccatggtggcctctcctcctcgtctggcctggttccccgtc
cagaggagcggaaagccggctggagagctgctcgctgccttcgagctcatccgcagggag
aaggcctcaattcatcacatccctggtcaggagggtgacataatgcctcctgctcatatc
atggacgagcttattctcccaggattcctctctgaaaaccagcagcaatggccagaggag
tctgacctgccctacccaccccctcagagagagcccaatgtgttcatggttccacagggc
atccggccggttctccagcgcactgcaatagagatcttggcatggggattgcgtaacctg
aagagttttcagatggccagcgtgacctccccgagtctgcaggtggagtgcggtggccgc
gtggtgcagtcctgtgtcatccgcaacaccaagaagaaccccaacttcgatgtcaacacg
ctcttcatcgatgtgcggctgccacaagaggagctgtacatgccgcctttggtcatcaaa
gtgatcgacaacaggcagtttggcaggaagccggtggtgggccagtgcaccatccgctac
ctggaggagttccgctgccaggaagaggacctggagagagaccccacagaggatgacata
ggagcgatggcaccaaccccccgggatgacatcctgattgacattgacgacaaagagcca
ctcatacctggacagctagcagatggaaccagttctgccattattaacatctcttcctct
cggtccagtctacatatgatacagtgggaggatgagttcatggactggtggagcaagttc
tacgcctcgacgggagagaggaacaagtgtgggacctacctggagaaaggcctcgacaca
ctgcagatctatgacagagagctggagagagtggatggtttcgagaagctggcagacttc
tgccagaccttcaagctgtatcgtggtcgaactcaggacgagagcgaggatccatctgtt
gtgggagaatttaaaggcatgtttaagatctacccactgcctgatgacccgtccaccccc
atgcccccacgccagttcagccttctgccccctaatggcaccgccgagtgcctggtgcga
gtttacatcatccaggccagtggcctacagcctaaagacaccaatggcaagtgtgacccc
tatgtgaagataacgatggggaagaagaccatcagtgaccaggaccactacatcccctgc
actctggaccctgtgtttggaaggatgttcgagctcagctgcacgctccctctggagaag
gacctcaagatcgtgctgtatgactacgacatgctgacgaaggatgaaaagatcggcgag
accgtcattgaccttgagaaccggttcttgtcacgctacggaggccggtgcggtctccag
cagtcttactgcgtgtcaggtgtgaaccaatggcgtgaccagctcaagcccaccctgctc
ctgcagcggctctgcgagaggaggagctaccggccaccggtctacaagcccgacagcgtc
cactttaggggtctggagtacacggccgccgacctgggggactccagatacgcaggcgag
gccctgacgccaaaccctcacttgggccctctgcaggagcgtctggccctcctcattctt
cgccggcaggggctggtgcccgagcacgtggagactcgtcgcctctacagtcccttgcaa
ccggacatcgagcaggggaggttgcagatgtgggttgacatatttcccaagtcctttggg
ccgccaggacctcccttcaacatcacacctcgcaaggccaagaagttcttccttcgctgt
gtcatatggaacaccagtgatgtcatccttgatgacgtcagccttagtggggagaagatg
agcgacatctatgtaaagggctggttgcatggacacgaggggaacaagcagaagactgac
gtgcactaccgctccttgggcggcgagggcaacttcaactggaggttcctcttcccgttc
cactacctgcccgcagaacagctctgcgttgtggacaggaaggaacacttctggagtttg
gacaaggccgaggccaagcttccccccaagatcaccatccagatttgggacaatgacaag
ttctccttcgacgactatcttggttgtttagacatggatctgaatcacatgctgcggcct
gctaagtctgctgagaagtgcactctagatctgctgcaccaggtcccagagaagctcgtc
tccctcttcgagcagaagaccgtgaagggctggtggccttgtgtgtgtgacagcaacggg
gagaaagtccttgccggaaaagtggagatgtcgctggagattgtgtcggagcatgagcag
gaggagaggcctgctgggcagggcagggacgagcccaacatgaacccccacctggaggac
ccccagcgtccggatacttcgttcctgtggttctcctctccgtacaagaccatgaagtac
atcatatggaggcggttcaagtggctcattcttctctttgtcattctcttcttcatcctt
ctcttcgctggagtcttcctctattccttcccgaactatgcggctatgaagctggtgtcc
ccctttggaggagggccgaaggggactcagtga
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integrated database retrieval system
