Alosa sapidissima (American shad): 121690127
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Entry
121690127 CDS
T11137
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00514
Other types of O-glycan biosynthesis
asad00515
Mannose type O-glycan biosynthesis
asad01100
Metabolic pathways
Module
asad_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
121690127 (pomt1)
00514 Other types of O-glycan biosynthesis
121690127 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
asad01003
]
121690127 (pomt1)
Enzymes [BR:
asad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
121690127 (pomt1)
Glycosyltransferases [BR:
asad01003
]
O-Glycan biosynthesis
O-linked Man type
121690127 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
121690127
NCBI-ProteinID:
XP_041926449
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All DBs
Position
18:15008201..15020581
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AA seq
722 aa
AA seq
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MLSSHKIPVTVKVEINVLLLLVTLLGLLTRLYGIQFPRAVVFDEVYYGQFVSLYMKQVFF
VDESGPPFGHMILALGAYLGGFDGNFVWNRIGAEYSNNVPVWSLRVIPALSGALCVPLGY
LLMQELGYSHLVALMASVLLLLENSLIVQSRFMLLESILIFFLLLAVVSYLRYCKAPNDS
SVRWVWLALSGVASSCAIGVKYMGLFTYLLLLGLATVHVWKLIGDKSLNMAVVVKQVVAQ
FFALIVLPVVLYLVFFYAHLSILYHSGPHDQMMSSAFQASLEGGLARITKGQPLEVAYGS
QVTLRSISSKPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPRRQD
LVVSSPPRVVHHGDVIQLLHGMTSRFLNTHDVAAPMSPHSQEVSCYIDFNVSMPVQNLWR
VDILNRESERESWKTILSEVRLVHVNTSAVLKLSGTSLPDWGFRQLEVIGDKVYKGYQQT
GMWNVEEHRYGRSHEQKERELELNSPTHIDISCNLSFIARFLELQWRMLSVKAEESEHKY
SSSPVEWITMDTNIAYWLHPSNNAQIHLIGNFVTWTLANIALAVYCLLFLAYLLRRRRKI
QDIPEASWAQMVQAGAVCAGGWAVNYLPFFTMEKTLFLYHYLPALTFQILLVPVVLEHVH
SHILRSPSQRWAFGGVVLAALSAVLLAYHTISPFTYGHVEMTSDQLAMLRWKESWDILLR
KH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttctcataagataccggtaacagtcaaagtcgagatcaatgttttactgcta
cttgttactcttctcggactgctgaccaggctgtacgggattcagtttccaagagctgtt
gtgtttgatgaggtttattatggacagtttgtatctctctatatgaaacaagtatttttc
gttgacgagagtggaccaccatttggccatatgatacttgcgcttggagcctatctggga
ggatttgatggcaactttgtctggaacagaataggagcagaatactccaataacgtacct
gtttggagcctcagagtaattccggccctatcaggcgctttgtgtgtgccactggggtat
ctgttgatgcaagagttgggttattcccatcttgttgctttaatggcatcagtgcttctc
ttgcttgagaactcactgattgtccagtctcgcttcatgttactggagtctattctcatt
tttttcctgctgcttgctgtggtttcctatctccgttattgtaaagctccaaatgattca
tcagtcaggtgggtatggctggcactgtcgggtgtggcaagttcttgtgctatcggagtg
aaatacatgggtctgttcacctacctgctgcttttgggcttggcaactgttcatgtctgg
aagctcataggagacaagtcgttaaacatggccgtggttgtgaagcaggttgttgcacag
ttttttgccctgattgtgctgccagtggtcctctacctggttttcttctacgcccatcta
agcattctctatcacagtgggccacatgaccagatgatgagcagcgcttttcaggccagt
ctggagggtgggctagcgagaatcacaaagggtcagcctctggaggtggcatatggctct
caggtgaccctccgcagtatctccagcaaacctgttccatgctggctacattctcacaag
gcgaattaccctataaggtatgaaaatggtcgtggcagttcacatcaacagcaggtaact
tgttacccttttaaagatgtcaacaactggtggataatcaaagatccaagaagacaagac
ctggtggttagtagtcctcccagagtggtccatcatggagatgtcattcagcttcttcat
ggaatgacctcacgtttcctcaatacgcatgatgttgctgctcccatgagtcctcactca
caggaggtgtcatgttacatcgacttcaatgtgtccatgccggttcagaatctttggaga
gtggatatactaaacagagagtccgagagagagagctggaaaactattttgtcagaagtg
cgattggtccatgtcaacacatcagctgtgctgaagcttagtggaacctctttgccagac
tgggggttcaggcagctggaggtgattggcgataaagtctataagggctaccaacagact
ggcatgtggaatgttgaggagcatcgctacggaaggagtcatgaacagaaagagagggaa
ctggaactcaattctcccactcatatcgacatcagctgcaacctcagcttcatcgccagg
tttttagaactccagtggcgaatgctgtctgtgaaagctgaggagtctgaacacaagtat
agctcttcacctgtagaatggatcaccatggataccaacattgcatattggcttcatcct
tcaaacaatgctcagattcacctcattggaaactttgtaacttggacattggcaaacatt
gcattggctgtgtattgtctgttgttcttggcatatctcttgagaagacgcagaaaaata
caagatattcctgaagcaagctgggctcagatggtccaggctggagctgtgtgtgccgga
ggctgggctgtgaactacctccctttcttcacaatggagaaaacactttttctttaccac
tacctgccagcgctcaccttccagatcttactcgtcccagttgtcctggaacacgttcac
tctcatatcctcaggtccccatcacaacgttgggcatttggtggggttgttttggcagct
ttgtctgcagtgttactggcctaccacaccatctccccctttacctacggccatgttgag
atgacttctgatcagttggccatgctgcgctggaaagagagctgggatattctgctgcgc
aaacattaa
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