Alosa sapidissima (American shad): 121693705
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Entry
121693705 CDS
T11137
Symbol
gabrr2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2a isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121693705 (gabrr2a)
04082 Neuroactive ligand signaling
121693705 (gabrr2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121693705 (gabrr2a)
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121693705 (gabrr2a)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121693705
NCBI-ProteinID:
XP_041929259
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Position
19:complement(29014855..29034119)
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AA seq
473 aa
AA seq
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MMPYFLQSLFFLLCLIIVVECRKHGNRERRWTGPVETQKHGTSLTKKPPDVTKSRKMKTE
QILRVDDHDFTMRPAFGGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFT
STTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA
ACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLSTDERISLSQFLIQKFHTT
SRLAFYSSTGWYNRLFINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSL
GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERRD
RKLRERMREQSLPCTCGMSHTGTMMGDGTYSEADTNSLAGYTEAPIMHSEEREKQEHMVV
HLSVSSESTATKKKGGLRAFRIIQNTHAIDTYSRVIFPGAYIIFNLIYWSVYC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttattttctacagtcgctgtttttccttctctgcctgatcattgtcgttgaa
tgccgaaaacatggaaatagagagagaaggtggacgggaccagtggagactcagaagcat
ggcacttcactgactaagaagccacctgatgtaaccaaatccaggaagatgaagacggag
cagattcttcgcgtggatgaccatgatttcaccatgaggccagcgtttggaggccctgct
gttccagtcggtgtcgatgtgcaggtggagagcttggacagtatttcagaagtagatatg
gacttcaccatgactctgtacctgagacactactggaaggatgagcggctgtcctttacc
agcaccaccaacaaaagcatgaccttcgacgggcgcctggtgaagaagatctgggtgccc
gacgtcttcttcgtccactccaagaggtccttcatccacgacacaaccaccgacaacatc
atgctgcgcgtgttccctgatggccatgtcctgtacagcctcagagtcacagtcacggca
gcctgtaacatggacttcagccggttccctctggattcacagacttgctcgcttgagctg
gaaagctacgcctacacggatgaggacttaatgctgtactggaagaatggggacgagtca
ctgagcacagacgagaggatttccctgtctcagttcctcattcagaagttccacaccacc
tcccggctggctttctacagcagcacaggctggtacaaccgcttgttcatcaatttcact
ctgcggagacacatcttcttcttcctgctgcagacctacttccccgccacactgatggtc
atgctgtcctgggtgtccttctggatcgaccgcagggccgtgcccgccagagtctcctta
ggcatcaccactgtgctcacgatgtccaccatcattactggagtcaacgcctccatgcct
cgagtatcctacatcaaagcggtggacatttacctgtgggtcagttttgtgtttgtgttc
ctatcggtgctggagtatgccgccgtcaactacctgactacggtccaggagcgacgagac
agaaagctcagagagcgaatgagagaacagtcgctgccctgcacctgtggcatgtcccac
actggcaccatgatgggcgacggcacgtacagcgaggcggacaccaacagcctggcgggt
tacaccgaggcccccatcatgcacagcgaggaacgggagaagcaggagcatatggtggtg
cacctgtcagtgagcagcgagtccaccgccaccaagaagaaaggcggcctgcgggccttc
cgcatcatccagaacacgcacgccatcgacacgtactcccgcgtcatcttccccggggcc
tacatcatcttcaacctcatctactggtcggtctactgttga
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