Alosa sapidissima (American shad): 121698186
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Entry
121698186 CDS
T11137
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04010
MAPK signaling pathway
asad04517
IgSF CAM signaling
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121698186 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121698186 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121698186 (rapgef2a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121698186
NCBI-ProteinID:
XP_041936024
LinkDB
All DBs
Position
1:8208728..8245748
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AA seq
1500 aa
AA seq
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MASFVDNSFRHAVIKIPAERTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSARRGCECIVLEPSEMLVV
DYVDESEVYFQRQASHRQSRRRFRKINQSGERETIIDTVEHDDYPLSSSKPPLPPTYHSE
SPKQQLAVDFSKLHLSESLHPHLTRSSQSACSFTSESGSSSLSDIYQSTESECGELDLSG
LPETAVDSDEEEEDDEEEDVSRSADPLMSRDVVRDCLEKDPMDRTDDDIEQLLEFMQQLP
AFANLSVWVRRELCAVMVFAVVERAGTVVLNHGEELDSWSVILNGSVEILYPDGQNEALC
MGSSFGVTPSMEKELMVGVMKTKVDDCQFVCIAQQEYCHILNRVELNTQRVEEEGEIVMV
KEHRDLDRTGTRKGHIVVKGTCERLMQHLVEDHSVVDPTYIEDFLLTYRTFLPRPLSLGH
RLLEWFKEPSLRDKVTRVVLMWVNNHFSDFEEDDAMSGFLEEFQSCLEKEKMTGHLRLLN
IACAAQAKPRVVCVSRAARDCPLPFSLLGGAERGTRLFISAVEVGSNAEEAGLKRGDQIL
EVNGQSFENLLLSKAMEILKGQLQLTMSVKTNLLVFKELVSRVLEERRSGVPHLPKIGDA
RKNRLSVPDLAVTLGGGGQEKVNRKAKAHTVGGRNKLLKILDKTRISILPQKPYSVGQSQ
DDSIVGMKQSKHVSSSLTASGTLSPSNPDLQNQQVASEHTNCQSEQDQVLRVFKADQQSR
YLMVTKESTAREVINHAMREFGLSAPPEAYSLCEVTVTPEGVTKQRRLPDQLNKLADRIQ
LSSRYYLKSNTETETLCSDVEAQELLRESQVCLLSLSSEELANQLSARNYLLFSSIHPVD
YILDLFKLRPGDAHSTANLHQFEDLINQETFWVATEIVKEPNQVRRAKVIKQLIKVAARC
REVNNYNSTFNIISGLNLAPVSRLRGTWEKLPAKYDKLLSELQTVFDPSRNMAKYRSLLN
TPPTHTLQPPVIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAREIRHVGRMATVYT
DPTLLYRTRKKKWRSLGSLSQTGSSTVLDMAMMGQKKRSRRGSFLGAKRLYEEELMMRRV
RQYLSTHVHVPQSPEELLHTLSLQWEPAAQPVSKSSGERRTVDSSPAMPRSPTPQASHTH
LARRRSSNKETFGAKSPQPLQKVLNHSEEGRSQQKSQVEDSQSNASSLLSSPPVSPQSTP
RRGVYPSSDVDQYSLLSSSSCDLMEDVRGPHAHVHINMPAHTQSASNILSTARTEPDQIS
LGSYSLSQDQCDRASLDAADSGRGSWTSCSSGSHDNIQSIPQRCWDTLSEGAGGVRGYWT
TPTGYWGDELEGETGTIKRRGNKPVIGECRGNKPVIGHREGRFREPPPTPPGYTPLAEVS
YNPPPGRRPPDYNAALQRSRLLKRTCDSPGPIGVQQIGHAHRQAPRPPQGKEDGEQVSAV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttgtagacaatagttttcgtcatgcagtaataaaaatcccggcggagagg
acgcaacaggatctccagattgtgtactcttatctgcatgggatggaagcactgtccaac
ctgagagaacaccagctcaggttaatgtgtgaaacagtccgatatgagcagcatgaggcc
aatgaagttctctactatcctgatgacattgggagctgctggtacattttgctgtctgga
tcggtcttcatcaaagaatccatgtttcttccacgcagcagcttcgggaagcgctctgcg
ggcagtgcaaggagaggctgtgagtgcatcgttctggagccatctgagatgctagtggtg
gactacgtggacgagagtgaagtgtacttccagcgccaggcgtcccatcgccagtcccgc
cgcaggttccgtaaaatcaaccagagtggggaacgagagaccatcatcgacactgtggag
cacgatgactaccccctcagcagcagcaagccccccctaccccccacctaccactcagag
agccccaaacaacagctggcagtggatttctctaagctccacctctccgagagtctccac
ccccatctcacccgctccagccaatcagcatgcagcttcaccagcgagtctggcagcagc
agcctgtcagacatttaccagtcgacagagagcgagtgtggagagttggacctgagtggg
ctgccggagacagcagtggactcggatgaggaagaggaggacgacgaagaggaagacgtc
agtcgctcagccgatccgctcatgagcagagatgtagtgagggactgtctagagaaggac
cccatggatcgcacagatgacgacatcgagcaattactggagtttatgcagcagctgcca
gcctttgccaacttgagtgtgtgggtgcgcagagagctgtgtgccgtcatggtgtttgca
gtggtggagcgcgcgggcacagtggtgctgaaccatggagaagagctggactcgtggtca
gttattctgaatgggtcagtggagattctgtaccctgatggccagaatgaggctttgtgc
atgggaagcagctttggtgtgactccctccatggagaaggagctcatggtgggagtgatg
aagaccaaggtggacgattgtcagtttgtgtgcatcgctcagcaagagtactgccacatt
ctcaaccgtgttgagctgaacacgcaacgtgtggaagaggagggggagatcgtcatggtc
aaggaacaccgcgatctcgaccggacaggaacccgaaaagggcacattgtcgtcaagggc
acgtgtgagcgcctgatgcagcatctggtggaagaccactcggtggtggaccccacctat
atcgaggacttcctgttgacctaccgcaccttcctgccacgccccctcagccttggacac
agactcctggagtggtttaaagagcccagcctgcgagacaaggtcacccgcgtggtgctc
atgtgggttaataatcacttcagcgactttgaggaggatgacgccatgagcggcttcctg
gaagagtttcagagctgtttggaaaaagagaagatgacgggccacctgcggctgttgaac
atcgcgtgtgcggctcaggccaagcctcgcgtggtgtgtgtgtcccgcgccgcgcgcgac
tgccccctgcccttcagcctgctgggcggagccgagagaggaacgcgcctcttcatcagc
gccgtggaggtgggcagcaatgccgaggaggcgggccttaaacgaggagaccagattctg
gaggtgaatggccagagttttgagaacctgctgctgtcgaaagccatggagatcctcaaa
ggccagctgcagctcacaatgagtgtcaagaccaacctgctagtgtttaaggagctggtt
tccagagtgttagaggagaggaggagtggagttccgcacctgccaaagattggtgatgcg
cggaagaatcggctctctgttcctgacctggcggtaacgttagggggtggaggtcaagag
aaggtcaacaggaaggctaaagctcacacagtaggcggccgcaacaaactcctcaagatt
ctggacaaaactcgcatcagcatcttgccacagaagccatacagtgtgggtcagtcccag
gatgacagcatagtgggtatgaagcagtccaaacacgtgtcgtccagtttgacagccagc
ggaaccctgtcgccaagcaaccctgacctgcagaaccagcaagtagctagtgagcacacc
aactgccaatcagagcaagaccaggtgctgcgtgtgttcaaggctgatcagcagagcagg
tacctgatggtaaccaaggagagcacggcgagggaggtgatcaatcatgcgatgagagag
tttggtctgagcgcgccccctgaagcctattcgctgtgtgaggtgactgtcacgcctgag
ggcgtgaccaaacagagacggcttcctgatcagctcaacaaacttgctgataggattcag
ctcagttccaggtactacctgaagagcaacacggagacggagactctgtgctcggacgtg
gaggctcaggagctgctgcgggagtcccaggtgtgcctgctctcgctgagctctgaggag
ctggccaatcagctgtcggcgcgcaactacctgctcttctccagcatccacccggtggac
tacatcctggacctgttcaagcttcgcccgggcgacgcccactccaccgccaacctgcac
cagttcgaggacctcatcaaccaggagaccttctgggtcgccacggagatcgtcaaggaa
cccaaccaggtgcggagggcaaaggtcatcaagcagctcatcaaggtggcggcgcgctgt
cgagaggtcaacaattacaactccaccttcaacatcatcagtgggctgaatctggccccc
gtgtctcgactaagggggacttgggagaagctacctgctaagtatgacaagctgctgtcc
gagctgcagactgtgtttgacccgtcgcgcaacatggccaaataccgcagcctgctcaac
acgccacccacacatactctccagcccccggtcataccgctctttccggtcatcaagaag
gacctcaccttcctgcatgaaggaaatgattcaaaggttgatggtttggtgaactttgag
aagctccgcatgatcgccagagagatccgccatgtgggtcgcatggccaccgtctacaca
gaccccacactcctctacaggactaggaaaaagaagtggaggagtctggggtccttgagc
cagacgggcagctcgacggtgctggacatggccatgatggggcagaagaaacgcagccgt
aggggctcgttcctgggggccaagcgcctgtacgaggaggagctgatgatgcggcgcgtg
cgccagtacctgagcacccatgtgcacgtgccccagagccccgaggagctgctacacaca
ctctccctgcagtgggagcccgccgcgcagccagtgtctaagagttcaggcgagaggagg
actgttgactcctcacctgccatgccccgaagtcccacccctcaagcctcacacacacac
ctggcccgaaggagatcctcaaataaagaaacgtttggtgccaagtccccacagcccctg
cagaaggtcctcaaccactctgaagaggggcggagtcagcagaagagccaggtagaggac
agccaatcaaacgcttcgtcactgctctcctctccacctgtttcaccacaaagcacacca
cgcagaggtgtgtatcccagctcagatgtggaccagtacagtctcctcagctcctcgtcc
tgtgacctgatggaggacgtgcgaggtccacacgcccacgtccacatcaacatgcccgca
cacacgcagtccgccagcaacatcctctctaccgccaggacagagcctgaccagatcagc
ctgggctcctactctctgtctcaggaccagtgtgatcgtgcatcactggatgccgctgac
agtggccgcggaagttggacctcctgctcgagtggttcccatgacaacatccagagcatc
ccgcaaaggtgttgggacactttgtccgaaggtgcaggaggtgtgcggggctactggacc
acacccactggttactggggagacgagctggagggggagacgggaacaatcaagcgccgt
ggtaacaagcctgtcataggtgagtgccgtggtaacaagcctgtcataggtcacagagaa
gggcgtttccgtgagcccccgcccacgcctccgggttacacgcctttggcggaggtcagc
tacaacccgccgcctgggaggcgtcccccagactacaacgctgcactacagaggtcacgc
cttctcaagagaacatgtgactctccagggccaatcggtgttcagcagattggccacgcc
cacaggcaggctccacgcccccctcaggggaaggaagatggagagcaagtgtcggcggtg
tga
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