Alosa sapidissima (American shad): 121706815
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Entry
121706815 CDS
T11137
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121706815 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121706815 (thoc7)
03041 Spliceosome [BR:
asad03041
]
121706815 (thoc7)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121706815 (thoc7)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121706815 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Herpes_pp85
BRE1B
Zw10_N
OVT1
OSTMP1
Peptidase_S10
DUF1351
DASH_Dad2
Sec8_N
COG6_N
NRN1
APG6_N
V_ATPase_I
CENPH
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
121706815
NCBI-ProteinID:
XP_041944791
LinkDB
All DBs
Position
4:35982873..35986822
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AA seq
202 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSTGSPEEGVIQYQRMVGTLSQ
CEFSMGKTLLVYDMNLKEMENYEKIYKDIEQNITSAHDKITECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSQIKENVEDKLELRKKQFHVLLSTIQELQQ
TLETDEKSENDDTQESSMDNGD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagtaactgatgacgaagttattcgaaaacgtctcctcattgatggcgacggg
gctggagacgaccgacgtattaatgtgctcctcaaaagcttcacaaaatggtgcaactca
actggctcacctgaagagggagtaatccagtaccagaggatggtgggcaccttgtcgcaa
tgtgaattttcgatggggaagaccctactagtgtatgacatgaatctcaaggaaatggaa
aattatgaaaagatttataaagatattgagcaaaacataacatcagcccatgacaaaatc
acagagtgcaaaaaggagattcagcgggctaaaagaatacgaaaaaatcgccaagagtat
gatgctttagcaaaggttatacagcagcatccggaccgccacgagacactgaagcagctt
gaagcactcgacaaagaacttcagcagctttcacagattaaagagaatgttgaagataag
ttggagctgcggaagaagcagttccacgtcctcctcagtacgatccaggaactgcagcag
acactggagactgatgaaaagtcagagaatgacgatacccaggagagctcgatggataac
ggtgactga
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