Alosa sapidissima (American shad): 121707690
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Entry
121707690 CDS
T11137
Symbol
prph
Name
(RefSeq) peripherin
KO
K07607
peripherin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121707690 (prph)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121707690 (prph)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
KIF21A_4th
GAS
CCDC39
Laminin_II
BRE1
Motif
Other DBs
NCBI-GeneID:
121707690
NCBI-ProteinID:
XP_041946349
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Position
4:13525519..13534088
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AA seq
557 aa
AA seq
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MYKSRAASHLDVLLLHSFSNPPEPGQLLLTPLLLRPTLPLECERTTETDIEPENASFKPK
KARISQPTAIMSSHSTARTSYRRTFGSPSPAMHSYTPLSSRMMPHSSRYLSSMPSAMPQR
QVAYRARSSTPTQRLSYDKVDFSLAEAVNQEFLTTRSNEKQELQELNDRFASFIEKVRYL
EQQNAGLQAELNQYKGQQQQGQPNRATDLCQQEMRELRRQLELVGKDRDEIQVERDNLAE
DLALMKQKYEEENQKKQEAENNLVLFRKDVDDATLSRLELERKIESLMDEIEFLKKLHDE
EIQDVQVSHQTQQMKFEVETQQARPDLTAALRDIRAQYENIASKNMQESEEWYKSKFTDL
TESAKRNNDAMRQAKQEANEYRRQIQALNCDVDALKSTNEALLRQMREMEDQFGVEAGNY
QDNVVRLEEEIRHLKDEMSRHLREYQDLLNVKMALDIEIATYRKLLEGEESRIVMPMHMS
SIRGGAADYDDKPEPGHGKKVVIKTVETRDGEVVKESRKEKDAHDSRDKSDSRDKSDSRD
SRDSHGGRDSKDSDGDE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaagccgcgctgcatctcacttggacgtcctgttgcttcactccttctcaaac
cctcctgagcctggacagctgctcctgacccccctccttctgagacctactctgccgctt
gagtgcgagagaacaacagagacagacatagaaccagagaacgcatcctttaagccaaag
aaagccagaatcagccagccaacagccatcatgagcagccactccaccgcccgtacttcc
taccgccgcaccttcggcagcccctcccccgctatgcactcctacacgcccctctcgtcc
cgcatgatgcctcactctagccgctacctgagctccatgcccagcgccatgccccagcgc
caggtggcctaccgggcgcgctccagcaccccgacccaacgcctctcctacgacaaggtg
gacttcagcctggccgaagcggtcaaccaggagttcctgaccacgcgcagcaacgagaag
caggagctgcaggagctcaacgaccgcttcgccagcttcatcgagaaggtgcgctacctg
gagcagcagaacgccgggctgcaggccgagctcaaccagtacaagggtcagcagcagcag
ggccagcccaaccgcgccaccgacctctgccagcaggagatgcgcgagctccggaggcag
ctggaactcgtggggaaggaccgcgatgagatccaggtggagagggacaatctggctgag
gacctggccctcatgaagcaaaagtatgaagaggaaaatcagaagaagcaggaggctgaa
aataacctggtcctcttccgtaaggatgtggacgacgccactctgtctcgtctggagctg
gagaggaaaatcgaatcgttgatggatgagatcgagttccttaagaagctccatgatgag
gagatccaggacgtgcaggtgagtcaccagactcagcagatgaagtttgaggtggagacc
cagcaggcccgtccagacctcaccgccgccctgagggacatccgggctcagtacgagaac
atcgcctccaagaacatgcaggagtctgaagagtggtacaagtccaagtttactgacctg
acagagtcggctaagcgtaataatgatgccatgaggcaggccaagcaggaggccaatgag
tatcgccggcagatccaggccctcaactgtgatgtcgatgctttgaagagcacgaatgag
gctcttctgaggcagatgcgggagatggaggatcagtttggcgtggaagccggaaactac
caggacaatgtggttcgtctggaggaggagattcgccacctgaaggacgagatgtcccgt
catctgagggagtaccaagacctgctcaatgtcaagatggcgctggacatcgagatcgcc
acctacaggaagctgctcgaaggagaggagagcaggatcgttatgcccatgcacatgtcc
tccatccgtggtggtgctgctgattatgatgacaaaccagaacctggacatggaaagaaa
gttgtgatcaagactgttgagacccgtgatggagaggtggtgaaggagtctaggaaagaa
aaggatgcccacgatagccgtgacaagagtgattcccgtgataagagtgattcccgcgat
tcccgtgattcccatggtggccgtgactctaaagactccgacggggatgagtag
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integrated database retrieval system
