Alosa sapidissima (American shad): 121708492
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Entry
121708492 CDS
T11137
Symbol
aatf
Name
(RefSeq) protein AATF
KO
K14782
protein AATF/BFR2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121708492 (aatf)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
90S particles
Other 90S particles
121708492 (aatf)
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GFIT
Motif
Pfam:
AATF-Che1
TRAUB
Alb1
Motif
Other DBs
NCBI-GeneID:
121708492
NCBI-ProteinID:
XP_041947121
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Position
5:17782048..17798315
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AA seq
578 aa
AA seq
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MASSISQQLEDLLNPLPKFTDPEDDQDEATKARVIEKFDEGDEVDDYTSVSGLKKRSSHI
LEETDRRYAGKATSRKELQKLVAGSDEEEEDDDGDEDGDDDDNDEGGDSDELEDDDDEEE
ELEDDEEDEEERDEDAPVKTKSVTKLKSTDITFPKETDFRKLTEGMDDLGVSEEDDEGDS
GEEDKDSSEGSEEEDDEEEDDDEMDDTDAVMTFSKEKVDEEVEKGKSVKNQLALWDQLLE
SRIKIQKALATANQLPQPQTFPEFKNKGDVQFSGALKNSHKALKALQRSLVDLQDLLLLQ
NPETRVIAQGKAWSANSKSKVMEDSDLDEEDEEEDDDDEDEDEKSKGSQNGGAPKRKLEM
SDYPDFMTKRFANFEPYRNSTLQKWYDKTRLTMGKNTKGFGSFDRNILTQVEHVLMDKER
LVRRTQTRRSQFRVLGKPEITAPVLEPAATEKEAVEQAMLKANAHLKDLDEEIFDDSDFY
HQLLRELIERKTSAADPNDQVAMGRQWLAIQKLRSKIKKKVDTKASKGRKIRFHIHSKLV
NFMAPVDHSSMHDEARTELYRSLFGGDTLTGAAPRDGL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctatatcacaacagttagaagatctattaaatcctctaccaaagttcaca
gatccagaggacgatcaagatgaagccactaaggccagggtaatcgaaaagttcgatgag
ggtgatgaggtggatgactacacttcagtctctgggctcaagaagcgtagttcccacatc
ctggaggaaactgaccggcgatatgcggggaaggcgacatctcggaaagaactgcagaaa
ctagtagcaggatcagatgaggaagaggaagatgacgacggtgatgaagacggagatgat
gatgataatgatgaaggtggtgacagtgatgaattggaagatgacgacgatgaggaggag
gagctggaagatgatgaagaggatgaggaggaaagggacgaggatgctccagtgaaaact
aagtcagtcaccaaactgaaaagcaccgatatcacctttccaaaagagacagactttcgc
aaactaactgagggaatggatgaccttggagtaagtgaagaggatgatgaaggagatagt
ggtgaggaagataaagacagttcggaaggatcagaagaggaagatgatgaggaggaagac
gatgatgagatggacgacactgatgccgtgatgacattttctaaggagaaggttgatgaa
gaagtagaaaagggaaagtctgtgaaaaatcaacttgctctttgggatcagcttctggag
agcaggataaagatccagaaagctctggccacagccaatcagcttccacagccccagacc
ttcccagagtttaaaaacaagggagacgtgcaattttcaggagccttgaagaacagtcac
aaagcgctgaaggccttgcagaggtccctagtggaccttcaggatcttctcctgctccag
aacccggagaccagggtcatcgctcagggcaaggcatggagtgcaaacagcaagagtaaa
gtcatggaggatagtgatctggatgaggaggatgaagaagaagatgatgacgatgaagat
gaagacgagaagtcaaagggctcgcaaaacggaggggctcccaagcggaaacttgaaatg
tcagactatcctgatttcatgaccaaacgctttgcaaattttgagccctaccgcaacagc
accctgcagaagtggtacgacaagacacgactcaccatgggcaagaacaccaagggtttt
gggtcatttgaccggaacattctaacccaggttgagcacgtgttgatggataaggagagg
ttagtccgtcgcacacagacgcgacggtcccagttccgagtccttggcaagcccgagatc
accgctcctgtacttgagccagcagctacagaaaaagaggcggtagagcaggccatgctg
aaggctaacgcacacctcaaagacctggacgaggagatcttcgacgacagtgatttttat
caccagcttcttcgagagctcatagagcgcaagaccagtgcagctgatcccaatgaccag
gttgcaatgggcaggcagtggctggccattcagaagctgcgcagtaagatcaagaagaaa
gtggacaccaaggccagcaagggccgcaaaatcaggttccacatccacagcaagctggtg
aattttatggctccagtggaccacagctcgatgcatgatgaggcacgaacggagttgtat
cggtcactctttggaggcgacacactcactggtgctgccccgcgtgatggactctaa
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