Alosa sapidissima (American shad): 121709292 Help Entry 121709292         CDS       T11137                                  Symbol si:dkeyp-50d11.2 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism asad  Alosa sapidissima (American shad) Pathway asad04141   Protein processing in endoplasmic reticulum asad04210   Apoptosis asad04217   Necroptosis asad04218   Cellular senescence asad04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:asad00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     121709292 (si:dkeyp-50d11.2)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     121709292 (si:dkeyp-50d11.2)    04217 Necroptosis     121709292 (si:dkeyp-50d11.2)    04218 Cellular senescence     121709292 (si:dkeyp-50d11.2)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121709292 (si:dkeyp-50d11.2)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:asad01002]     121709292 (si:dkeyp-50d11.2) Enzymes [BR:asad01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      121709292 (si:dkeyp-50d11.2) Peptidases and inhibitors [BR:asad01002]  Cysteine peptidases   Family C2: calpain family    121709292 (si:dkeyp-50d11.2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_7 CAPN13-like_C_EFh Motif Other DBs NCBI-GeneID:  121709292 NCBI-ProteinID:  XP_041948478 LinkDB All DBs Position 5:9564779..9573100 Genome browser AA seq 704 aa AA seqDB search MEPVFAAGVALRLRSDRDRSEGLGQNDKAHKFLGQDFEILRAQCLQSKRLFEDDYFPAKH SSLGFKELGPSSAKAQGVRWLRPTEFCSDPHFIVDGATRTDICQGALGDCWLLAAIACLT LNEPLLHRVVPHGQSFHHDYAGIFHFQIWQFGEWVDVVVDDRLPVRDGKLLFVHSAEGAE FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELKKAPPNLYSIIQKAVDRG SLLGCSIDITGFFDMEAVTFKKLVKGHAYSVTGVEEVELKGSLTKLIRIRNPWGEVEWTG AWSDESREWNSVDPSVRSRLHHRSEDGEFWMSFSDFMREFSRLEICNLTPDALQVSQLKK WNTVLYPGEWRRGSTAGGCRNYPATFWINPQYKIALTQPDTDSQSDCSFLVALMQKDRRR LRQEGKDMETIGFAIYEVPEECKGQAGMHLRRDFFLKQASKARSELFINLREVSSRFCLP EGEYIIVPSTFEPQKEGDFVLRVFSEKPADSQELDDELTADLPEEERLDESQIDEGFKNL FKQLAGQEMVITISKLQMILNRVVSKHKDLKTDGFGKEACRCMIALMDTNGSGKLGLADF HVLWEKVKKYLTIFRKFDLDKSGTMSSYEMRLALESAGFKLNNHLFQLIILRYAKPDLNV DFDNFVTCLIRLESMFKTFKTMDTDADGVVSFNFSQWISLTMFA NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atggagcctgtgtttgctgcgggagtggctttgcgcttgcgaagcgacagggaccgttcg gagggtctgggccagaatgacaaagctcacaagttcctgggacaggactttgagatcctg agagctcagtgccttcaaagtaaacgactgtttgaggatgactacttccccgcaaaacac tcctcacttggtttcaaggagcttggaccgagctcagcgaaagcacagggggtccggtgg ctaagacccacggagttctgctctgacccccactttatcgtagatggtgctactcgcaca gacatctgccagggagctctgggtgactgctggttgctggcagccattgcatgccttacc ctgaatgagcccttgttgcatcgggtggtgccccatggacagagcttccaccatgactat gcaggaatatttcacttccagatctggcagttcggagagtgggtggatgtggtggtggat gaccggctgccggtgagggatggaaagctgctgttcgtccactcagctgagggagcagaa ttctggagtgcactgctggagaaagcgtatgcaaagctgaatggctgttacgaagcactc tctggtggcagcacctctgagggcttcgaagacttcaccggtggggtgacggagatgtac gagctaaagaaggcccccccgaacctctacagcatcatccagaaagcggtggacagaggc tccttgctcggctgttccatcgacatcaccggcttctttgacatggaagcagtcaccttc aagaagctggtgaagggccacgcctactctgtcacaggggtggaggaggtggagttgaag gggagcctgaccaaactgatacgcatccgcaacccctggggagaggtggagtggacagga gcctggagtgacgaatcacgggagtggaacagtgttgatccatctgtccggtccagacta catcaccgtagtgaagatggagaattctggatgtcctttagtgactttatgcgggagttc agtcgcctggagatctgtaatctgacaccagatgccctgcaggtgagtcagctgaagaag tggaacacggtgctctacccgggggagtggagaaggggcagcactgctggaggatgtaga aattacccagcaacattctggatcaatcctcagtacaaaatagccctcacgcagccagac acagacagccagtcagattgcagctttctggtggccctgatgcagaaggatcgtcgtcgg ttacgtcaggagggcaaggacatggagaccattggatttgctatatatgaggttcctgaa gagtgtaaaggtcaggcggggatgcacctgcgtcgggacttcttcctgaagcaggcgtcc aaagcgcgctcggagctcttcatcaacctgcgcgaggtcagctcccgcttctgcctccca gagggggagtacatcatcgtcccgtccaccttcgaaccccagaaggagggagactttgtg ctgagggtgttctccgagaaaccggccgactcccaagagctagacgatgagctgacagca gatctgcctgaggaggagcggcttgatgagagtcagattgatgaaggcttcaaaaacctc ttcaaacagctggctggacaggaaatggtgatcactatatcgaagttgcaaatgatcttg aacagggttgtaagcaaacataaagacctgaaaacagatggctttggaaaggaggcatgt cgatgtatgatagctctaatggacactaatggcagtggaaagctaggcctggcagacttc catgtgctctgggagaaagttaagaaataccttactatatttaggaagtttgacttggac aagtctggcaccatgagctcctatgagatgcgtctggcactggaatctgcaggtttcaag ttgaataaccacctcttccagctgatcattctgcgctacgccaagccagaccttaatgtg gattttgataactttgtcacttgcctgattcgtttggagtctatgttcaagaccttcaaa acaatggacaccgatgctgatggagtggtatccttcaacttctcccagtggatctctctc accatgtttgcctaa

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