Alosa sapidissima (American shad): 121710041
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Entry
121710041 CDS
T11137
Symbol
si:dkey-125i10.3
Name
(RefSeq) calphotin
Organism
asad Alosa sapidissima (American shad)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
121710041
NCBI-ProteinID:
XP_041949821
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Position
5:30329690..30337923
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AA seq
870 aa
AA seq
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MTSKDVDRATVFLTTKVRTSLKSDGCWIQSQESNTEDKPKLRVTLERKKSEMNSVDTISN
TNNSDVSPKPVKSPVGRQSSYILAALKKFESAEEQTGSPGKSPSYYAKRVTVANDAEADT
TLAKSSVEVSVNGGTTEKEENPVTPVVDPTQSISNTSTDPEEEADVKTPEDVTAVAAVGS
LAKEETPAQTSVETAPDTVTPAETALEVPTATSVVTGPEVPAAIPTETAPEVPTATSVVT
RPEVPAAIPTETAPEVPAAISTETALEVPTATSVVKGPEVPAAIPAETAPEVPAAIPVET
TPEVPDVTAIKIPAAAPVKAATEVPAARAVEVPVKAAPEDPAVTHAESVPEVPAVTVVDA
APEVPVDTPAESVPEVPDAVPVETTPDTAVVSTAEVPAATAGDATPKVHEVPVEVAPGVP
AYTPAEVAPEVPAVTSTEVAPEVLAVSSVDAPEAVVQTPVTADAEALVETTQDAPVEAVS
EVGPVEVVATVTETSADANIVVVPEAFADETVEAILETPAAPTIESADKTLEETPKEAKV
ESQVVAPTGSAAEAPEEAPVESVAATPEEALVESVIATPEEAPVESVIATPEEVPVQYVI
ATPEQVPVYSVYSVAETPKAASVEVVTPTVAIDKAPEAAPEEAVAKTAPVEVTAHTPEAV
SAEAAVASVEVAEVSVAPVLEETVKSLTEGDAGQAESTDAPATTVPVATSAGPSDEPATD
ASDEVKESALRSDETLPTENEEVSVDAPETEALITSAEQPVVETALNQENVIKLSEALDG
ECSEKTLQDQSKVEENTTIISGQSVCTHCNELITGNVRITVDSLAICFHLECFKCGKCQK
NLGDLDLRMFNHEAAIICEECFDAIYHIEP
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaaggacgtagatagagcgacagtgtttttgacgaccaaagtgcgcacatca
ctgaaatcggatggctgctggatccaaagccaagaatcaaacacagaggacaaacctaag
cttcgcgtaacacttgaaagaaaaaaatccgaaatgaattctgtagacaccatctccaac
accaacaacagtgatgtgagcccaaaacctgtcaaatctccggtaggacgccagagctcc
tacattcttgcagctctcaagaagtttgagtctgctgaggaacagactggctctccagga
aaaagcccatcatactatgctaaaagggtgactgtcgcaaatgatgcagaggccgatacc
actttggctaagagcagtgtggaggtttctgtgaatggaggtactactgaaaaggaagaa
aaccctgtgaccccagtagtggatccaacacaatcaatctcaaacacatctactgatcca
gaagaagaggcagatgtaaagactcctgaagatgtaactgctgtagctgcagttgggtca
cttgcgaaggaagaaactccagctcaaacatctgtagagacagctccagatactgtcaca
cctgctgagacagctctagaagttcctactgccacatctgtggtgacaggtccagaagtt
cctgctgccatacctactgagacagctccagaagttcctactgccacatctgtggtgaca
cgtccagaagttcctgctgccatacctactgagacagctccagaagttcctgctgccata
tctactgagacagctctagaagttcctactgccacatctgtggtaaaaggtccagaagtt
cctgctgccatacctgctgagacagctccagaagttcctgctgccatacctgtggagaca
actccagaagttcctgatgtcacagccatcaaaattcctgctgctgcacctgtaaaggcg
gctacagaagtacctgcagctagagctgttgaagttccagtgaaggcagcccctgaagat
cctgctgttacccatgcagagtcagttccagaggttcctgcagtcacagttgtggatgca
gcccctgaagttcctgtagacacacctgcagagtcagttccagaagttcctgatgctgtt
cctgtagagacaactcctgacacagctgtggtttcaactgctgaggttcctgcagccaca
gctggggatgcaactcctaaagttcatgaagtacctgtggaggtagcgcctggagttcct
gcatacacacccgcagaggtcgctcctgaagttcctgcagtaacatccacagaggtagct
cctgaagttcttgctgtctcatctgtagatgcccctgaggctgttgtgcaaactcctgtc
actgcagatgccgaggcactggttgaaacaactcaagatgcacctgtagaagcagtttct
gaagttggtcctgtggaggtggtagccacagttactgaaacatctgcagatgcaaatata
gtggtcgtacctgaagcatttgcagatgaaactgtagaggccatacttgaaacacctgca
gctccaaccatagaatcagcagacaaaactcttgaagaaacacctaaagaggcaaaagtt
gaatcacaagtggtggcacctacagggtcagcagctgaagcacctgaagaagcacctgta
gagtcagtggctgcaacaccagaagaagccctggtagagtctgtgattgcaacacctgaa
gaagcccctgtagagtcagtgattgcaacaccagaagaagtacctgtacagtatgtgatt
gcaacacctgaacaagtacctgtatactcagtatactcagtagctgaaacacccaaagct
gcatctgttgaggtggttacaccaacagtggccattgacaaagcccctgaggctgctcct
gaagaggctgtggctaaaaccgctcccgtagaagtaacagcacacacacctgaggctgtc
tctgcggaggctgcagtcgcatctgttgaggttgctgaggtgtctgtcgcacctgtgctg
gaggaaacggtgaagtcactgaccgaaggagacgcaggccaggcagagagcacagatgcc
ccagccacaacggttcctgtagcgacatcagcaggaccctctgacgaacctgccaccgac
gcctctgatgaagttaaagagtccgctttgaggtcagatgagacattaccaactgaaaat
gaagaagtttcagtggacgcacctgaaacagaagcactcataacatccgcagagcaacct
gttgtagaaacagctcttaaccaagaaaatgtcatcaaattgtctgaggctttggatggg
gaatgctctgaaaaaactttacaagaccaaagtaaagttgaagagaatacaaccattatt
tcaggtcaatctgtgtgcacccattgtaatgagttaattactggaaatgtcagaatcacc
gttgactcccttgcaatctgcttccacctggagtgcttcaagtgtgggaaatgccagaag
aatttaggtgatctggatttaagaatgttcaatcatgaagcagccataatctgtgaagaa
tgctttgatgcaatctaccacattgaaccataa
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