Alosa sapidissima (American shad): 121713154
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Entry
121713154 CDS
T11137
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121713154 (znf827)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121713154 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_16
zf-C2H2_4
zf-C2H2_6
zf-C2H2_REST
zf-C2H2_jaz
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
121713154
NCBI-ProteinID:
XP_041953469
LinkDB
All DBs
Position
1:35639679..35687151
Genome browser
AA seq
1500 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSVSEGGPEGGAAEDDGWFGNASDTPSDSSYGDVRPDELRVSPD
AGSGPARPELADTPASEGSLGCSTPIQRASLELLGLDGAVLNAQDSLSSVVSSLYGDATA
HALGKPLSSNLRRLLESGSLKLEEGALLGRIGAGGAAARGASDSPPVGLTLSPLSHHAQQ
LSALARRLANSSGNSANSASASASPVPVTVKQESTGDPFSPSNGTSGNNVATNSGFVWVG
MADKWPPPSGCSGASGSSLSPDSAIQKLKAAANAVLQDKSAAVASASSVSSSSSSSSSSS
SSSVTSSTSMPPLGTRGSDDVVRFDAFTSPFSPQSASSTLAALSKKVSERSQQQQQQQQQ
QQSSMAAAEHQSPASSFLSLVSMTSSAALLKEVAARAAGNLLADKKDTNLGPGSTDDVKP
LVDRNQKTPTSTQSMDLLLPPTPKGRTKSSSQAGSPEEGGKPFQCPVCGLVIKRKSYWKR
HMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCDLCPFTSSRHFSLKLH
MRCHQHFPRPDVKVKEEQVTDNEEGEGSLAGDASGCGDIAMATDTEASPSPLPHMDGRLR
TSPGESSNHIQIKEEPQERDVSVLSPFSLGRERPASSTSSLELPGLKASPGGPTAASLFS
PDITTKTATDLLMKLSAANQKEGLKGTLCVKEEPGAEPSQSPRAPGFSFCQEGPVGGPKP
REEGSPMLAKSSSLLSQDINIKVASELLMKLSENNKETCSQTVTVKAEPMEVDPPSDPAP
LPSHLLGFSTLGACEKREPMANLPEALPRPQKDLFSQDISVKMASELLFKLSEKVSKANS
NKDNTTLGMNSPFLDDRFRQSPFNTRSKSSSPAEASSSAQALQDSEKAGGEPGNGLAQWR
LNEQLYPCPVCGKVFGRQQTLSRHLSLHTDERKYRCHLCPYAAKCRANLNQHLTIHSVKL
VSTDAEHIVNAVTGESNERKNCSFYYSCHVCGFQTELNAQFVSHMSLHVDKEQWMFSLCC
TSCDYVTVDESDIKSHVAAEHLGLSRSPLSETKSTSSSLSALSDSLNSSEGGDATPSSEE
LKSLLAPPSTGSQSSSGSGSDEKSEKGFECVFCNFVCKTRAMYERHLQIHLITRMFECDV
CHKFMKTPQQLLEHKKCHSVPTGGLKCPFCVYSTSRPAALECHLKTHCKPEYRCRICQSV
WADQAELEGHARAHRLGNHYRCEQCGYLSKTANKLIEHVRVHTGERPFRCDRCSYSCKRK
DNLNLHKRLKHAPRQSYSCSLCPFTTTHPFVFSRHLKKHQGGGGGGEGSAEEGEAQQGSS
CLGLGGGREALLLLEEEAGLGGSSSGSGGSNSSSPLMSLSASQALQSVALSIRCKQQQRQ
GASPLQHYLSANGLAAPTPPLPALASAWSPRAGSLASSYYEQYRNCELAHLIPLTTLFTM
RRYAPHGLPSSSSSSPSPFSSSPCLSRQGRITSLPSPKTPSSLKHSFLAYLGLTERAKTV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacctaagcgcctgccttcacatgtggactctgtctca
gagggggggcctgagggtggtgctgccgaggatgatggctggttcgggaacgcctcggac
acaccttcggactcgtcctatggtgatgtgcggcccgatgagctacgggtctcccccgat
gcaggcagtggtccagcgaggcctgagctggcggacaccccagcgtccgagggctcgctc
ggctgctccacgcctattcagcgtgcctctctggagctgctggggctggacggggccgtg
ttgaacgcgcaggactccctctcctcggtggtgtcctcgctttacggggacgccactgcc
catgcgctgggcaagccgctcagcagcaacctgcggcgcctcctggagtctggctccctc
aagctggaggaaggagcgctgttggggcgcataggcgcgggaggcgcggcggccagagga
gcgtccgactcgcctcccgttggcctgacgctctcgccgttgtcccaccacgcccagcag
ctcagcgccctcgcccgtcgcctggccaacagcagcggaaacagtgccaactctgcctcc
gcctctgcttcacctgtgcctgtcaccgtcaagcaggagtccaccggtgatcccttcagc
cccagcaacggcaccagtggcaacaacgtggccaccaacagtggctttgtctgggtgggc
atggccgacaagtggccaccaccgtccggatgctctggagccagcggcagcagcctgtct
ccggactcggccatccagaagctgaaggcagcggccaacgctgtgctgcaagacaagagc
gctgccgtggcctcggcctcctccgtctcctcctcctcctcttcctcttcctcctcctcc
tcctcctcagtgacctcctccacctctatgccaccgctaggcacgcgcggctcggatgac
gtggtgcgcttcgatgccttcacctccccctttagcccacagtcggccagctccacgcta
gcggcgctctccaagaaggtgtccgagcgcagccagcagcagcagcagcagcagcagcag
cagcagagcagcatggcggcagcggagcaccagagccctgccagctccttcctctcgctc
gtgtccatgacctcgtcggctgccctcctgaaggaggtggcggcacgagcagcaggcaac
ctactggccgacaagaaggacactaatctgggtccgggctccacagacgacgtgaagccc
ctggtggacaggaatcagaaaacccccacgtccactcagagcatggacctgctgcttccc
cccaccccaaagggcagaaccaagtccagcagtcaagcagggtccccagaggagggcggg
aagccgttccagtgcccagtgtgtggcctggtcatcaagcgcaagagctactggaagaga
cacatggtgatccacactggcttgaagagccaccagtgccccctctgtcccttccgctgt
gctcgcaaagacaatctcaagtcccacatgaaggttcaccaacaccaagaccgaggggag
accttccagtgtgacctctgtccattcacctcctcgcgtcatttcagcctgaagctacac
atgcgctgtcaccaacacttcccccggccagacgtcaaggtcaaagaggagcaggtcacc
gacaacgaggaaggcgaggggtcattggcgggcgatgctagtggttgtggggacattgcg
atggccactgacactgaggcgtccccctctcctctgccacacatggacggccgtctgagg
acgtcacctggcgagagctccaaccacatccaaatcaaagaggagccccaggagcgcgac
gtgtctgtgctgtcgccgttcagcctgggccgggagcggcccgccagcagcaccagctcc
ctggagctgcccggactcaaggccagccccggcggacccaccgccgcctccctcttcagc
cccgacatcaccactaagacggccactgacctgctcatgaagctctcagcggccaaccag
aaggagggccttaagggcacactctgcgtgaaggaggagccaggggccgaaccctcccag
agcccccgggcccctggcttcagcttctgccaggaggggccggtgggggggccgaagccc
cgggaggaggggagccccatgctggccaagagcagcagtctgctgagccaggacatcaac
atcaaagtggcctcggaactcctcatgaagctctcagagaacaacaaggagacctgttct
caaacggtgaccgtcaaggccgagcctatggaggtggaccccccttctgacccagcccct
ctcccatctcacctattgggattcagcactttaggagcatgtgagaagagggaaccaatg
gcaaatctcccagaggcgttgccccgcccccagaaggatcttttttcccaggacatatct
gtgaagatggcctctgagctcctcttcaaactgtcagaaaaagtcagcaaagctaacagc
aacaaggacaataccacactgggcatgaacagtcccttcctggatgaccgcttcagacaa
tcacctttcaatactcgctccaagagctcatcacctgcagaagctagttcttcagcacag
gccctacaagactctgagaaggcaggtggagagccggggaacggtctggcccagtggagg
ttgaacgagcagctctacccgtgcccagtgtgtgggaaagtgtttggccgacagcaaact
ctatccagacacctgtccctacacacagatgagaggaagtacaggtgtcatttgtgtccc
tatgccgctaagtgtcgtgccaacctcaaccagcacctgactattcactcggtcaagctg
gtgagcaccgacgctgaacacattgttaatgccgtgactggcgagagcaatgaacgcaag
aactgctcattctattacagctgccacgtgtgtggtttccagaccgagctgaatgcccag
tttgtgagtcacatgtctctgcatgtagacaaggagcagtggatgttctccctgtgctgc
acctcctgcgactatgtcactgtggacgagagtgacatcaagtcacatgtagctgcagag
cacttgggtctgtctcgaagtccgctcagtgagacgaagagcacatcctcctctctgtcc
gccctcagcgactctctcaacagctccgagggcggcgatgccactcccagcagtgaggag
ctcaagagtctcctggccccgccctccaccggcagccaatcaagctctggctcagggtca
gacgagaagtccgagaaaggctttgaatgtgtgttctgtaactttgtgtgtaagacacgg
gccatgtacgagcggcacctgcagatccacctcatcacgcgcatgtttgagtgcgacgtc
tgccacaagttcatgaagacgccgcagcagctgctggagcacaagaagtgccactccgtg
cccactggaggactcaagtgcccattctgtgtgtactccaccagcaggcccgcggccctg
gagtgccacctgaagacccactgcaagccggagtaccgctgccgcatctgccaatcggtg
tgggcagaccaggccgagctggaggggcacgcgcgtgcccaccggctgggcaaccactac
cgctgcgagcagtgcggctacctctccaagacggccaacaagctgatcgagcacgtgcgc
gtgcacacaggcgagcggcccttccgctgcgaccgctgcagctacagctgcaagcgcaag
gacaacctcaacctgcacaagcgcctgaagcacgccccgcgccagagctacagctgcagc
ctctgccccttcaccaccacgcaccccttcgtcttcagccgacacctcaagaagcaccag
gggggaggagggggaggggaagggagcgccgaggaaggcgaggcccagcagggcagctct
tgcctgggcctgggcggagggcgggaggccctgctgctgctggaggaggaggcgggcctg
ggcggcagcagcagtgggagcggcggcagtaacagcagcagccccctcatgagcctgtcg
gcctcgcaggccctgcagtcggtggcgctgtccatcaggtgcaagcagcagcagcgccag
ggcgcctcgcctctccagcactacctctccgccaacggcttggcagcgcccacacctccg
ctcccggccctggcgtctgcgtggtcgccgcgtgccggctcgctggcgtccagctactac
gagcagtacaggaactgtgagctggctcacctcatcccgctcaccacactcttcaccatg
cgccgctacgcgccccacggcttgccctcctcctcctcttcctccccctctcccttctcc
tcttctccctgcctctccagacaggggcgcatcacatcccttccttcacccaaaactccc
agctctctcaaacactccttcctggcttacctgggactgaccgagcgcgctaaaactgtc
tga
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integrated database retrieval system
