Alosa sapidissima (American shad): 121713326
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Entry
121713326 CDS
T11137
Symbol
tfe3a
Name
(RefSeq) transcription factor E3a isoform X1
KO
K09105
transcription factor E3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121713326 (tfe3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121713326 (tfe3a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121713326 (tfe3a)
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
121713326
NCBI-ProteinID:
XP_041953786
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Position
7:23003741..23024074
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AA seq
587 aa
AA seq
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MSALSASEQKGEENGKVEFYQNANQLMLSGHRVPHEQPQTVFVILDSDAEAMNLISLEPV
LPESGIVADIEVEGIIASASDTFYQLKSQPISLSASVTPADPAPSLSTTMTSRVLMRQEL
MRQQAQDQERREAQQQANSAQLRSANDTTPAISMATMLPAARAAPAQVPVEVLKVQTHLE
NPTRYHIQQAQRQQVKEYLSHTLGNNVASQQLGNSPSTLSGSAPELAPAANSTPSSPMAV
LSLSSNKEEIEDVIEDIISLESSLNDDPFITLIDSNLQLANTLPVSGNLLDVYSSAGMAT
QTITVSNSCPANLHNVKRELTDAEAKALMKERQKKDNHNLIERRRRFNINDRIKELGALI
PKTSDPMAYLLTPTSLGDRDMRWNKGTILKASVDYIRKLQKDQQRAKEMEMRQKKLEHHN
RSLLLRIQELEMQARLHGLAASAAQSSEFLLTQQQQTAATLEAAGADCLSKSLLSLGGGS
ALGQSAASSFLSEASASIASPGALGSALDLGTLTFAELGDDSAGSIFSPALMAEMGLGDI
LMDDGSSGSAIGALSPVGGADPLLSSVSPGASKTSSRRSSFSMDEDL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctctctgcctcagaacagaagggtgaagaaaatggaaaagtggaattttat
caaaacgccaatcaactcatgttatcgggacaccgggtgccccatgagcaaccccagaca
gtgttcgtgattctcgactctgatgcagaggctatgaacttgatcagtttggagcctgtc
cttcctgaatctggcatagtcgctgacatagaagtcgaaggcattattgcgtctgcttcg
gacaccttctatcaactgaagagtcagcccatttctctcagtgcctcagtgaccccggcc
gacccggcgccgtctctcagcaccaccatgacgtcgcgggtgctgatgcggcaggagctg
atgcggcagcaggcgcaagaccaagagcggcgtgaggcccagcagcaggccaacagcgcc
cagctccggtccgccaacgacactacgcccgccatctccatggcgaccatgctccccgcc
gccagagccgccccggcacaggtgcccgtggaggtgctgaaggtgcagactcacctggag
aaccccaccaggtaccacatccagcaggcccagcgtcagcaggtgaaggagtacctgtcc
cacacgctgggcaacaacgtggccagtcagcagcttggcaactccccctcgactctctct
ggctctgccccggaactggccccggcagccaatagcacgcccagcagccccatggccgtg
ctcagtctcagctccaacaaagaagagattgaagacgtcattgaggacatcatcagcttg
gagtccagtctgaacgatgaccccttcatcacactgattgattccaacttgcagctcgcc
aacacgctgccagtctcgggcaacctcctggatgtgtacagcagtgctgggatggccacg
cagaccatcaccgtcagcaactcctgccctgccaacctgcacaacgtcaagagggagctt
accgatgcagaggccaaagcacttatgaaggaaaggcagaaaaaggacaaccacaacctc
attgagcgccggagacggtttaacatcaatgaccgcatcaaggagctgggtgcgctcatc
cccaagacaagcgaccccatggcgtacctgttgacgcccacatccctgggggacagggat
atgcgctggaacaagggcaccattctgaaggcgtcggtggactacatccgcaagctgcag
aaggaccagcagcgtgccaaggagatggagatgaggcagaagaagctggagcaccacaac
cgcagcctgctgctccgcatccaggaactggagatgcaggcccgtctccacggcctcgcc
gcctccgctgcccagagctccgagttcttgctgactcagcagcagcagacagcggcgact
ctggaagcggcgggggccgactgcctctccaagagcctgctcagcctgggcggggggtca
gcgctgggccagtcggccgcctcctccttcctgtcggaggcctcggcgtccatcgcctcc
ccgggagccctgggcagcgcgctggatctgggcacgctcaccttcgccgagctcggcgac
gactcggccggctccatcttcagcccggcgctcatggccgagatgggcctgggggacatc
ctgatggacgacggcagcagcggcagcgccatcggtgccctgtcgccagtagggggcgcc
gacccactcctctcgtccgtctcgccgggcgcctccaagaccagcagccgcaggagcagc
ttcagcatggacgaggacttgtga
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