Alosa sapidissima (American shad): 121714298
Help
Entry
121714298 CDS
T11137
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04020
Calcium signaling pathway
asad04814
Motor proteins
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121714298
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121714298
04820 Cytoskeleton in muscle cells
121714298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121714298
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
121714298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
EF-hand_11
SPARC_Ca_bdg
SAPC2_N
EF_EFCAB10_C
RTX_C
Syntaxin
EF-hand_EFHB_C
SapB_1
SPEF2_C
Motif
Other DBs
NCBI-GeneID:
121714298
NCBI-ProteinID:
XP_041955528
LinkDB
All DBs
Position
7:10252360..10255122
Genome browser
AA seq
160 aa
AA seq
DB search
MTDAQQEARSYLSEEMLAEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPTREELEEII
EEVDEDGSGSIDFEEFLVMMVRLLKEDQAGKSEEELAECFRVFDNNGDGYIDRDEFAEII
RSTGESVTEEEIDELLKDGDKNADGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgcaacaggaggcccgctcatacctgagcgaggagatgcttgctgagttc
aaggctgccttcgacatgttcgacactgatggtggcggtgatatcagcaccaaggagttg
ggtcaagtcatgagaatgttgggtcagaacccaaccagagaggagttggaagaaatcatc
gaggaggtcgatgaggacggcagcggttccattgacttcgaggagttcttggtcatgatg
gtgaggctcctaaaggaggaccaggccggcaagagcgaggaagagttggcagagtgcttc
cgtgtgtttgacaacaacggtgatggatacatcgacagagatgagtttgctgagatcatc
cgcagcactggtgagtccgttacagaagaagagattgatgagctgctgaaggatggagac
aagaacgctgatggcatgctggactttgatgaattcctcaagatgatggagaacgtgcag
taa
DBGET
integrated database retrieval system
