Alosa sapidissima (American shad): 121719787
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Entry
121719787 CDS
T11137
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121719787
Membrane trafficking [BR:
asad04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121719787
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
Ig_3
I-set
ig
LRR_LRWD1
LRR_14
Ig_2
LRRNT
LRR_9
V-set
LRRCT
Motif
Other DBs
NCBI-GeneID:
121719787
NCBI-ProteinID:
XP_041961494
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All DBs
Position
1:complement(43899256..43941783)
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AA seq
637 aa
AA seq
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MVGTARLAWSPAMATSLAATVLPPLLLLLLLAAAPSCQGCPPRCECAAQLRSVSCQRRRL
SGVPEGIPTETRMLDLSRNRLRWVAPGELAPYPRLEELDLSENLITTLEPNAFASLQNLR
VLRLRANQLKLVPMGAFAKLGNLTTLDLSENKIVILLDYTFQDLHSLRNLEVGDNDLVYI
SHKAFTGLVALEDLTIARCNLTSISGQTLSYLRSLVTLRLRHLSITALEDQNFRKLSALR
GLEIDSWPYLEYISPLSFQGLNLSWLSITNTNITSVPSASFRNMVYLTALNLSYNPIQTL
EPWAFRELLRLKELHMVSTGLLTVEPHALAGLRQLRLLNLSSNELVTLEEGAFHSVNSLE
TLRVDGNPLACDCRLLWILQRRRTLNFDGRAPVCAGPSEVRGTVLSSFADSALFDYFTCQ
KPRIRNRKLQQVTAREGQPVSFLCHAEGEPAPAIIWISPQRRRIASRSGAAGGGGGRVVV
LPGGTLEIRYAQVTDSGTYICIASNAGGNDTYFATLTVRGGGMGMGGGLGGMPALDAALF
ANRSLYYSSELNDTSFNGTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRG
RGQRRNNFTVEYSFRKGDGGATSGGQGGARKFNMKMI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcacagcgaggctggcctggtctccggcgatggcgacatcgctggcggcgacc
gtccttcctccgctgctgctactgctgctcctagcggccgccccctcgtgccagggctgc
ccaccgcgttgcgagtgcgccgcccagctgcgctccgtgtcatgccagcgccggcgcctg
tccggcgtgcccgagggcatcccgacggaaactcggatgctggacctcagccgcaaccgc
ctgcgctgggtggcgccaggcgagctggcaccctacccgcggctggaggagctggacctg
agcgaaaacctgatcactaccctggagcccaacgccttcgccagcctgcagaacctgcgc
gtgctgcgtctgcgtgccaaccagctcaagctggtgcccatgggcgccttcgccaagctg
ggcaacctcaccacgctggacctgagcgagaacaagatcgtcatcctgctggactacacc
ttccaggatctgcacagcctacgcaacctggaggtgggtgacaatgacttggtctacatc
tcccataaggcgttcactggcctcgtggcattggaggacctgaccatcgcccggtgcaac
ctgacgtccatctcgggccagacgctctcctacctgcgcagcctggtgaccctgcgcctg
cgtcacctgagcatcacggccctggaagaccagaacttccgcaagctgtcggcgctgcgt
ggcctggagatcgacagctggccctacctggagtacatctcgccgctcagcttccagggt
ctcaacctgtcctggctgtccatcaccaacaccaacatcacgagcgtgccctcggcctcc
ttccgcaacatggtctacctgaccgcactcaacctctcctacaaccccatccagacgctg
gagccctgggccttccgcgaactcctgcggctcaaggagctgcacatggtcagcacgggc
ctgctgacggtggagccgcacgcgctggccggcctgaggcagctgcggctgctcaacctg
tcgtccaacgagctggtgacgctggaggagggcgccttccactcggtcaacagcctggag
acgctgcgcgtggacggcaacccgctggcgtgcgactgccgcctgctgtggatcctgcag
cgccggcgcacgctcaactttgacggccgcgcgccggtctgcgccggcccctccgaggtg
cgcggcacggtgctgagcagctttgctgactcggcgctcttcgactacttcacgtgccag
aagccgcgcatacgcaaccgcaagctgcagcaggtgacggcgcgcgagggccagcccgtg
tccttcctgtgccacgccgagggcgagccggcgcccgccatcatctggatctcgccgcag
cgccgccgcatcgcgtccaggagcggagcggccggcggcggaggtggccgcgtcgtggtg
ctgcccggcggcacgctggagatccgctacgcgcaggtgaccgacagcggcacctacatc
tgcatcgccagcaacgccggcggcaacgacacctactttgccacgctgaccgtacgcggc
ggcggcatgggcatgggcggcggcctgggcggcatgccggccctggacgcggcgctcttt
gccaaccgctcgctctattactccagcgagctcaacgacaccagcttcaacggcacgcgt
gtcttcctcaagttcacgctggacctcaccaccatcctggtgtccactgccatgggctgc
atcaccttcctgggcgtggtgctcttctgcttcctgctgctgttcgtgtggagccgcggc
cgcggtcaacggcggaacaacttcaccgtggagtactccttccgcaagggtgatggcgga
gccaccagtggcggacagggaggggctcgcaagttcaacatgaagatgatatga
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