Alosa sapidissima (American shad): 121720495 Help Entry 121720495         CDS       T11137                                  Name (RefSeq) collagen alpha-1(VI) chain-like   KO K06238   collagen type VI alpha Organism asad  Alosa sapidissima (American shad) Pathway asad04510   Focal adhesion asad04512   ECM-receptor interaction asad04518   Integrin signaling asad04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:asad00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121720495    04518 Integrin signaling     121720495  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121720495   09142 Cell motility    04820 Cytoskeleton in muscle cells     121720495  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:asad04147]     121720495    00536 Glycosaminoglycan binding proteins [BR:asad00536]     121720495 Exosome [BR:asad04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121720495 Glycosaminoglycan binding proteins [BR:asad00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121720495  Hyaluronan   Extracellular matrix or blood plasma proteins    121720495 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 VWA_CoxE Glu_cys_ligase Motif Other DBs NCBI-GeneID:  121720495 NCBI-ProteinID:  XP_041962618 LinkDB All DBs Position 10:complement(24645067..24689546) Genome browser AA seq 1008 aa AA seqDB search MNIVGISVLLSWMTIACSFRQNDVGLFYDCAVDVYMVLDTSESVALRANSYGSFVDKIKQ FALDFVDQLNMRYYRCDRNMTWSVGILHYSDEVKIMSELISIHEAGGKPKLKKAIQDIRY IGKGTHTDCAISVATGQLMTGSPVLGNKYMVVVTDGHPFDGYKEPCGGISYAVSEARGME IKIFGVAITPDHLDNRLSAIATEDMYRYNLSATSNNPEVVRNTINTIVSTIYKDSETLCC SYECKAPRGSVGPSGEAGDVGTPGRQGVAGKPGSLGAKGSAGDQGPTGHRGEKGDSGPAG DRGPKGPSGQKGEKGQNGVDGKDGLMGEPGLVGLSGCKGDDGMEGEPGPPGQRGDPGSFG GLGEKGETGPVGSPGLPGVPGPSGPKGDSGSSGTRGNKGDRGDDGDFGAPGPSGSEGGKG EKGLRGPPGIRGGPGEKGDLGPPGAQGHEGPSGEVGSVGANGVSGLKGYKGEPGPTGPEG VKGTRGLPGPPGERGSTGERGEDGFPSEGQLGYAGFQGLPGLRGPAGSKGVRGFPGMKGD IGLPGDRGDDNNLPGREGPAGPKGYPGLAGEQGTPGPEGPTGPDECEILEVIQKLCSCCE CECGPVKLLFVLDSSESIGLQNFTLEKEFIIRIINKITKFSKENEPGSRVGVVQYSHEGT QELVSMDDPKITSLSQLKSAVKNMRWIAGGTYTGEALDFASKAFRTSQLDHKVVIVLTDG RSDPRDTKPLTSLCSIPNNRVLGIGIGDVFRRAPYETMLGRISCLESITPGHYLKITDHS QLLDDSFFENVTSYICKDKKCPDYSCRADFKEATDIVFMLDGSSSVGQRNFEQSRAFVGN MAKRLLSTDYSGLLRVSVMQYSGAQQHRVEVPFTSQVDDVLTRLQAVRYMDSTTDLPAAL GFLTTTVKREARRGVTQKVVIFTDGRSEATARADIPKAAAAALGQNMQVFALTVGEIVDE TGVCQLVTGQASGYSYEAVDRRVHRLAHYSDLTRRVVMQSLAKKLAKA NT seq 3027 nt NT seq  +upstreamnt  +downstreamnt atgaatattgtcggcatttcggttttactgtcatggatgaccattgcatgttcctttcgt caaaatgatgttggactgttctatgattgtgcagtggatgtctacatggtcttggacacg tctgaaagtgtggccctaagggcaaactcttacggctcctttgtggacaagatcaagcag tttgcacttgactttgtggaccagctgaatatgaggtactaccgctgcgaccgcaacatg acttggagtgtaggcatcctacactacagtgatgaggtgaagataatgagtgagctcatt agcatccatgaggctggtggcaaacccaagctgaagaaagccattcaggacatccgctac attggcaagggcacgcacactgactgtgccatttcagttgccacgggccaactcatgacc ggctcgcctgtccttgggaacaaatacatggttgttgtaacagacggccacccttttgat ggttacaaggagccgtgcggggggatcagctatgctgtttctgaggcccgaggcatggaa atcaagatcttcggggttgccatcacccccgatcacttggacaatcgtctaagtgccata gcaactgaagacatgtaccgttacaacctgtctgccacaagcaacaaccctgaggtggtg aggaacaccatcaacaccattgtctccaccatttacaaggactcggaaacattgtgctgt tcatatgaatgcaaggctcctagaggatcggtcgggccatctggagaggcaggagatgtg ggaactccaggaaggcaaggtgttgcagggaagcctggtagtcttggagctaagggttca gcaggtgaccagggacccacaggacacagaggagagaagggtgacagtggaccggctggc gatagaggcccaaaaggcccatctggacaaaagggagagaaagggcagaatggtgtggat ggaaaagacggactgatgggggagcctggactggttggcctgtcaggttgcaaaggagat gatggcatggagggggagccaggtcctcctggacaaagaggagatccagggtcatttgga ggtctgggtgaaaagggagaaactggaccagttggatctccaggactccctggggtgcct gggcccagtggaccaaagggtgattcaggctcctctggcacaagaggcaacaagggagac aggggtgatgatggtgattttggtgctcctgggccttctggatctgagggtgggaaagga gagaagggactaagggggcctcccgggatccggggcggaccaggcgagaagggtgaccta gggcctccaggagcccagggacacgagggcccatctggagaagtaggatcagtgggtgca aatggagtttctggtctaaaaggctacaaaggagaaccaggccctacgggtcctgagggg gtgaagggcaccagaggcctgcctgggccccctggagaacgtggctcaacaggagagagg ggagaagatggattcccgagtgaagggcaactaggatacgcaggattccagggactccct ggcctaaggggaccagctggatcaaagggtgtccgagggtttccaggcatgaagggggat attgggttacccggagaccgcggggatgataacaacctcccaggacgagaagggcctgca ggaccaaagggttatcccggcttggcaggagagcaagggactcctggaccagagggcccc accgggccggatgagtgtgagattctggaggtcattcaaaaactatgctcttgctgtgag tgtgaatgtggaccggtgaaactcctctttgtgctggacagctcagagagcatcggcctt cagaacttcaccctcgagaaggagttcatcatccgcatcatcaacaagatcacaaagttc agcaaggagaatgagcctggctctcgtgtgggcgtggtccaatacagtcatgaagggact caggagctggtgtccatggatgaccccaaaatcacctcactgtcccaacttaaaagtgca gtgaagaacatgcgctggattgctgggggtacctacacaggagaagcactggactttgcc agcaaggccttccgcacctcccagcttgaccacaaggtggtgatagtgttgacagatggc aggtctgacccacgggacaccaagccactgacatctctgtgcagcatacccaacaacaga gtgctaggaatagggatcggcgacgtgttccgccgagctccttatgaaacgatgctgggg agaatcagctgcctggagtcaatcactccaggacattacctgaaaatcacagaccactct cagcttctggatgattccttctttgaaaatgtcaccagctatatctgtaaagacaaaaag tgtccagactactcatgtcgagctgacttcaaggaggcaactgacattgttttcatgctt gacgggtcctccagtgtgggccagaggaactttgagcaatcccgagcatttgtgggaaac atggccaagcggctgctgtctacagactacagtggactcctgcgcgtctcggtcatgcag tacagcggagcccagcagcatagagtggaggtcccgttcaccagtcaggtggatgacgtg ctgacccggctccaggctgtgcggtacatggatagcaccacggacctcccggccgccctg ggcttcttaaccaccaccgtcaagagggaagctcggcgcggggttacccagaaggtggtg atcttcacggatgggaggtctgaggccactgctcgcgctgatatacccaaggctgctgca gccgctctggggcagaatatgcaggtgtttgccctgacggtgggagagatcgtggacgag acgggtgtgtgccagctggtgactgggcaagccagtggttacagttatgaggctgtggac cgcagagtccaccggttggctcactactctgacctgaccaggcgggtggtcatgcaaagt cttgccaaaaaattggctaaagcctga

DBGET integrated database retrieval system