Alosa sapidissima (American shad): 121720954
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Entry
121720954 CDS
T11137
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121720954 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121720954 (tex10)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
121720954 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TPR_CAND1
HEAT_MROH2B_C
HEAT_GCN1
TOR1L1_N
HEAT_EF3_N
HEAT_DAAF5
HEAT_GCN1_C
VMAP-M8
MMS19_C
Vac14_Fab1_bd
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
121720954
NCBI-ProteinID:
XP_041963405
LinkDB
All DBs
Position
10:complement(3700080..3724068)
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AA seq
918 aa
AA seq
DB search
MTKRKRQDDFQKVKLKVGKKKPTPDNATNVSFRSKGIHLPEQLKRDASGPTTHRQLGIKE
LLSQLHHYSASVKQGALCGLRELLTSHPALVEQHLSALLSEVAAAFTDKDGSVRSAALRL
LRFVAQCVPSERVGPFFPLLSAHLTCAMTHIQASIQADAMLVLDVLLEHYPALLAHRHAH
LLTNFLELISRQRLSGGAKANEKAGAGKAGWALSVTPDRGVTAQQWRLTVLLRLSRFLQA
VVEERPEEESVVSVDREGREKGITTPLELNWDDHPFGKGGIQVFENSGATPTPHSTYRLR
PDVDKGVGVGEELSSVERVRGFAETLVPLLLEVWVETLGTDNGHLLSGDAMVLMLQILTI
LQLLRRLTPQHHQQEELDIWLRNTYLSDFKLYFMKNFPYGQLDTPSPRHKKSSHRNRQQV
LAGAGSAASVEPLALNVTLCQVMVTLSHRGPGQPEGQDADWLGPIRSFVRETLTAGSRLS
SKQLGALLEVVRRLVVSQRGRAVSEDLLQAVYTQYQQRNLTMPVRLMLLRFFSQLYLKER
LNRSKILTRWLAALPVQLVQLGSRNPQLSAQILQTLQHAAAWKNKELLNSLLTHACSLYD
PQEGCVVVLPVDSQQRLVQMLYFLPACPPELLSCLSRVCNTGRVSAGLAATLIRIIHLRS
SISGWTSNWQEAAVRDVDYLSFLFSTLTGFSSDELAVLQQADEDALSPPSPLSPFSVYPT
PLEQFTHHWDIVEEVCHCLSTLGSNTQCFDILQNGICKNLVGLTVLPDGVCAAVLRVVAR
LLDLSFLPSDTLLHFLSDCCLSMLSLLLQLEHSAHKREAVWGACLAALSSVPRLLRLLLQ
SLRVCDMCEEEFPQLAQILSLLMQHTHLRNHMVANASLLQHIIQELTRYCGGESREQWLT
DLLYCYSVTLSGHRGNLY
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaggaaacgtcaggatgatttccaaaaagttaaactgaaggtgggcaagaag
aaaccaaccccagacaatgcaaccaatgtcagtttccgatcaaagggtatccatctccca
gagcaattgaagcgcgatgcgtctggtccaaccacacatcgtcagcttggtattaaggaa
ctactctcccagctccaccactacagtgcctcagtgaagcagggcgcattgtgtggcctc
cgtgagctgttgacgtctcacccagcactggtggagcagcatctctccgctctcctgagt
gaggtggccgctgcgttcacagacaaagatggcagcgtgcgctctgctgcgctgcgcctg
ctgcgcttcgtggcgcagtgtgtgcccagcgagcgtgtgggacctttcttcccactgctc
agcgcccacctgacctgcgctatgacacacatccaggcgagcatccaagcggacgccatg
ctggtccttgacgtcttgttggagcattaccctgctctgctggcccacagacatgcacac
ctgctcaccaacttcctggagctcatctcccggcagcgcctcagtggaggagccaaagcc
aatgagaaggcgggagcagggaaggctgggtgggccctgtctgtcacacccgaccgtggt
gtcacagctcagcagtggagactcacggtgctgctcaggctgagtcgattcctgcaggcc
gtggtggaggagaggccggaggaggagagtgtggtgtcggtggacagagagggcagggag
aagggaataacaactcccctcgaactcaactgggacgaccacccatttggcaaaggagga
attcaggtgtttgagaattctggagccacgcccactcctcattcaacctatcgactcagg
cccgatgtggataaaggtgttggtgtgggagaggagctgagctctgtggagagggtgcgg
ggctttgccgagacgctggtgcccttgctgctggaggtgtgggtggagacgctcggcacc
gacaacggacacctgctctctggggacgctatggtgctcatgctgcagatcctcaccatc
ctgcagctcctcaggcgcctgactccacagcaccaccaacaggaagaactggacatatgg
ctgcgtaatacctatctcagtgacttcaagctgtacttcatgaagaacttcccctacgga
cagctggacacaccgtccccccgccacaagaagagctcccacaggaaccggcagcaggtg
ctggctggtgcgggcagtgcggctagcgtggagcccctggcgctgaacgtgacgctgtgc
caggtgatggtgacgctcagccacagggggcccgggcagcccgagggccaggacgccgac
tggctcgggccgatccgcagctttgtgcgggagacgctgaccgccggcagcaggctgagc
agcaagcagctgggagccctgctggaggtggtgcggagactggtggtcagccagagaggc
cgagctgtctctgaggacctcctccaggcagtgtatactcaataccagcagaggaacctg
accatgccagtgcggctcatgctgctacgcttcttcagtcagctctacctaaaggaacgc
ctcaacaggagtaagatcctgactcgctggctagctgctcttcctgtccagttggtgcag
ctgggctccaggaaccctcagctgtctgcgcagatcctgcagacgctgcagcacgcggct
gcctggaagaacaaggagctgctcaacagcctgctgacgcatgcgtgcagcctgtacgac
ccacaggagggctgtgtggtggtgttgccggtggactcccagcagcggctggtgcagatg
ctctacttcctgcccgcctgcccccctgagctgctgtcctgcctcagccgagtgtgcaac
acgggccgcgtgtccgccggactggccgccacgctcatccgcatcatacacctgagatct
tctataagtggatggacgagtaactggcaagaagctgctgttcgggatgtggattacctt
agcttcctgttctccaccctcacaggcttctcctctgatgagctggcggtgctgcagcag
gctgatgaggatgccttgtctccgccctctcctctctcccccttcagtgtctaccccacc
cccctggagcagttcacacaccactgggacatcgtggaggaagtgtgccactgcttatcg
actctgggctccaacacacagtgctttgatattctccagaatggcatctgcaagaacctg
gtgggtttgaccgttctgcccgacggtgtgtgtgcggctgtcctgagggtggtcgcccgc
ctactggatctgagtttcctgcccagcgacacacttctgcacttcctgtctgactgctgt
ctgagcatgctcagtctactcctgcagctggaacacagtgcacacaaaagggaggcggtg
tggggggcgtgcctggcggcgctgagcagcgtgccccggctgctgcggctcctgctgcag
tcgctgcgcgtgtgcgacatgtgcgaggaggagttcccacagctggcgcagatcctctcg
ctcctcatgcagcacacacacctgcgcaaccacatggtcgccaacgcctctctgctgcag
cacatcatccaggagctcacgcggtactgtggaggggagtctcgtgaacagtggctgacc
gacctgctgtactgctacagtgtcacactgtctggtcaccgtggtaacctctactaa
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