Alosa sapidissima (American shad): 121724118
Help
Entry
121724118 CDS
T11137
Symbol
sema3ab
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-3ab
KO
K06840
semaphorin 3
Organism
asad Alosa sapidissima (American shad)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
ig
V-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
121724118
NCBI-ProteinID:
XP_041966409
LinkDB
All DBs
Position
11:complement(10106268..10141282)
Genome browser
AA seq
764 aa
AA seq
DB search
MDYLCRILLLLTATVLLGRMDAQQAKSNVPRLKLSYKEMLESNNLVTFNGLANSSAYHTF
LLDEERGRLFVGAKDHILSFDLVDITMNNQLISWPPSSTRRDECKWAGKDLQKECANFIK
VLHPYNSTHLYACGTGAFHPVCAYVEVGKRPEDNIFRLESSHMENGRGKSPYDPKLLTAS
LLIDGELYAGTSADFMGRDFAIFRTLGEHHPIRTEQHDSRWLNDPRFVGVHLIPESDNPE
DDKIYLFFRENAIDGEHAGKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGFN
GIDTHFDELQDVFLMSSKDPKNPVIYAVFTTSSNIFKGSAVCMYNMADVRRVFLGPYAHR
DGPNYQWVPFLGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVYPINNR
PIIIKTDVDYQFTQLVVDKVEAEDGQYDVMFIGTDIGTVLKVVSIPRGTWHDLEEVLLEE
MTVFRQPTVITAMELSTKQVNRQLFILFVLNCNLISHQLAIKNGQLHGETRRQDIRNGDP
LTQCSDLQHEDELQGRSVLLDKTVYGVENSSTFLECSPKSQRALTYWQYQRQGEDRKQEI
KWDDRVLATDQGLLIRSLQPRDSGIFYCHAVEHGFMQTLLRLTLQVIAADHLDELLHRNN
DPTALAPLSSEAPGNSGANPLGSSTNQKVWYRDFLSLLNHPNLNSVDDLCEQVWKRERKQ
RRQKAHMMQASQQHANKWKMLQENNNKKGRNRRTHEQQRAPRSV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggactacctctgtcggattttactactgctgaccgcaacagtgctactgggcaggatg
gacgcccagcaagccaagagcaacgttccccgtctgaagctgtcctataaagaaatgttg
gagtccaacaacctggtgaccttcaatggactggccaacagctcagcctatcacaccttc
ctgctggatgaggagaggggacgcctatttgtcggagccaaagatcacattttatccttc
gacctcgtggacattaccatgaacaatcagttgatatcgtggcctccatcttcaacacga
agagatgagtgcaagtgggcaggcaaggacttacagaaggagtgcgccaacttcatcaag
gtgctacatccgtacaatagcacccacctgtatgcctgtggcaccggagccttccaccca
gtctgcgcttacgtggaggtgggcaaacggcctgaggacaacatctttcgtctggagtct
tcacacatggagaatggccgtgggaagagtccgtatgacccgaaactgctgactgcttcg
ctgctgattgatggcgagctatatgcaggcacatcagcagacttcatggggcgggacttt
gctattttccgaacgctgggagaacaccacccaattaggactgaacaacatgactcaaga
tggctcaacgaccctcgatttgtcggtgtccatcttatcccggaaagcgacaaccctgag
gacgacaagatctacctgttcttccgtgagaacgccattgatggagaacacgccggcaaa
gccacccacgccaggattgggcagctgtgtaagaatgactttggaggccacagaagtttg
gtaaacaagtggacgacattcctcaaagcacgactggtctgttctgtcccgggcttcaac
ggcatcgacacacactttgatgagcttcaggatgttttcctcatgagctccaaggatccc
aagaacccagtcatatatgctgtgttcactacatccagtaacatcttcaaaggctcagcc
gtgtgtatgtataacatggccgatgtccgcagggtgttcttgggcccatacgctcacaga
gacggacccaactaccagtgggtccctttccttgggcgagtgccctatcctcgtcctgga
acgtgcccaagtaaaacttttggagggtttgactccaccaaagacctaccggatgatgtc
atcacatttgcccgaagccacccagccatgtacaaccccgtctatccaatcaacaaccgg
ccaatcatcatcaagacggacgtggactaccagttcacccagttggtggtggacaaagta
gaggcagaggatggccagtatgacgtcatgttcattggcacagatattggcacagttctt
aaagtggtgtcgataccgagagggacctggcatgacctggaggaggttctgcttgaagaa
atgactgtattcaggcaaccaactgttattactgccatggagctctcaaccaaacaggta
aataggcagttattcattttatttgtattaaactgcaatttaatctctcatcaactagct
atcaagaatggccagctccacggagaaactcgtcgccaggacatcagaaacggggatccc
ttgacccagtgctccgacttacagcatgaagatgaactgcagggccgtagcgtgctgctg
gataagacggtgtatggtgtagagaacagcagcaccttcctggagtgcagccccaagtcc
cagcgagccctcacttactggcagtatcagagacagggggaggaccgcaaacaagagatc
aagtgggatgaccgcgtactggccaccgaccagggcctgctgatccgtagcctgcagcca
cgcgactccggcatcttctactgccacgccgtggagcacggcttcatgcagacgctcctg
cgtctcacgctgcaggtcatcgccgccgaccacctggacgagctgctgcaccgcaacaac
gaccccaccgccctggccccgctcagcagcgaggctcccggaaacagcggcgccaacccc
ctgggcagctcgaccaaccagaaggtgtggtaccgggacttcctgtccctgctcaaccac
cccaacctgaacagcgtggacgacctgtgtgagcaggtgtggaagcgggagcgcaaacag
cggcggcagaaggcgcacatgatgcaggccagccagcagcacgccaacaagtggaagatg
ctgcaggagaacaacaacaagaagggccgcaaccgcaggacccacgagcagcagcgggcg
ccccggagcgtctga
DBGET
integrated database retrieval system
