KEGG   Aggregatimonas sangjinii: FGM00_10585
Entry
FGM00_10585       CDS       T07837                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
asag  Aggregatimonas sangjinii
Pathway
asag03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FGM00_10585 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asag03019]
    FGM00_10585 (rny)
Messenger RNA biogenesis [BR:asag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FGM00_10585 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd YtxH KH_KhpA-B KH_2 KH-I_KHDC4-BBP ZapG-like DUF5957 Ribosomal_L22
Other DBs
NCBI-ProteinID: QCX00537
UniProt: A0A5B7SPU0
LinkDB
Position
complement(2561764..2563332)
AA seq 522 aa
MDSTSILIGAIAGLIIGFVVAKFLEKGKASKTTANAKKEAEDILKTATKEAEDIKKDKIF
QAKEKFLELKAEHEKVIVGKNKKINESEKRTRDKESQVSSELAKSKKLNQDLEGKLKDVA
YRTEIFEKKQAEVDKLHKNQVQQLEVISGLSAEDAKEQLMESLKETARTDAMGFIQNTVE
EAKLTAEQEARKIVINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARVEEIVKKTEKQIEQEIV
EVGKRTVIDLGIHGLHPELIRAVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPKL
AKRAGLLHDIGKVPNTEAEVETPHAILGMQWAEKYGEKPDVCNAIGAHHDEIEMKTLISP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVQKAYAIQAGRELRVIVESEK
VSDDKAAELSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatagtacatcaatactaattggcgcgatcgcgggactgatcattggcttcgtcgtt
gctaaattcctcgaaaaaggcaaggcatcaaaaaccactgccaatgcgaaaaaggaagcg
gaggatattcttaaaactgccaccaaggaagccgaggatattaaaaaggacaaaattttt
caggcaaaggaaaaattcttggagctaaaggccgaacatgaaaaggtcatcgttggcaag
aacaaaaaaataaacgagtccgaaaagcgtacgcgtgataaagagtctcaggtcagcagt
gaattggccaagtccaaaaagttgaaccaagatttggaaggcaaattaaaggatgtggcc
taccgcaccgaaatctttgaaaagaaacaggccgaggtcgataaattgcacaaaaaccaa
gtccagcaattagaggtcatttcagggctttccgcagaggacgcaaaagaacaattgatg
gaatcgctaaaggagaccgctcgtaccgacgccatgggctttattcagaatacggtagag
gaggccaaacttacggcggaacaagaagctaggaaaatagttatcaataccattcagcgt
atcggtaccgaagaggcagtcgagaactgtgtgtcggtctttaacctcgaatcggacgac
gtaaaaggacgtattattggtcgggaaggacgaaacattcgggccttagaggcggccacc
ggtgtggaaattattgttgacgataccccggaggccattattctttcctgttttgattcc
gttcgccgcgaggttgccagactgtctttgcacaagttggtcaccgatgggaggattcat
cccgctcgggtcgaggaaatcgtaaagaaaaccgaaaaacaaatagaacaggaaatcgtt
gaggtagggaaacgtaccgtaatcgatttgggtatccacggactgcatccagagcttatt
agggcggtcggtagaatgaaataccgatcttcttatggacagaatttgttgcaacactct
cgtgaagtggccaagctttgtggtgtgatggcagccgagttgggcctaaatccaaaattg
gccaaacgcgccgggctgttgcacgatatcggtaaagtaccgaataccgaagccgaagtg
gaaacaccgcatgccattctcgggatgcaatgggcagaaaaatatggagagaaaccagat
gtctgcaacgccataggggcgcaccacgacgaaatagaaatgaagaccttaatatcgccg
atcgttcaggtgtgtgatgccatcagtggagctcgaccaggagcaagacgccaagtgctc
gattcgtatattcaacgtctaaaggatttggaagatatcgcattcgggtttgggggtgtt
caaaaggcgtacgctattcaggccggcagggaactcagggtaatcgttgagagcgagaaa
gtaagcgatgacaaggcagcagaactgtctttcgagatttcgcagaaaatacagaccgac
atgacctatccgggtcaggttaaggtgacggtaatccgcgaaacgcgggcggtcaacgtt
gccaaataa

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