Aggregatimonas sangjinii: FGM00_10585
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Entry
FGM00_10585 CDS
T07837
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
asag
Aggregatimonas sangjinii
Pathway
asag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGM00_10585 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asag03019
]
FGM00_10585 (rny)
Messenger RNA biogenesis [BR:
asag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FGM00_10585 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
YtxH
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
ZapG-like
DUF5957
Ribosomal_L22
Motif
Other DBs
NCBI-ProteinID:
QCX00537
UniProt:
A0A5B7SPU0
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Position
complement(2561764..2563332)
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AA seq
522 aa
AA seq
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MDSTSILIGAIAGLIIGFVVAKFLEKGKASKTTANAKKEAEDILKTATKEAEDIKKDKIF
QAKEKFLELKAEHEKVIVGKNKKINESEKRTRDKESQVSSELAKSKKLNQDLEGKLKDVA
YRTEIFEKKQAEVDKLHKNQVQQLEVISGLSAEDAKEQLMESLKETARTDAMGFIQNTVE
EAKLTAEQEARKIVINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRALEAAT
GVEIIVDDTPEAIILSCFDSVRREVARLSLHKLVTDGRIHPARVEEIVKKTEKQIEQEIV
EVGKRTVIDLGIHGLHPELIRAVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNPKL
AKRAGLLHDIGKVPNTEAEVETPHAILGMQWAEKYGEKPDVCNAIGAHHDEIEMKTLISP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVQKAYAIQAGRELRVIVESEK
VSDDKAAELSFEISQKIQTDMTYPGQVKVTVIRETRAVNVAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatagtacatcaatactaattggcgcgatcgcgggactgatcattggcttcgtcgtt
gctaaattcctcgaaaaaggcaaggcatcaaaaaccactgccaatgcgaaaaaggaagcg
gaggatattcttaaaactgccaccaaggaagccgaggatattaaaaaggacaaaattttt
caggcaaaggaaaaattcttggagctaaaggccgaacatgaaaaggtcatcgttggcaag
aacaaaaaaataaacgagtccgaaaagcgtacgcgtgataaagagtctcaggtcagcagt
gaattggccaagtccaaaaagttgaaccaagatttggaaggcaaattaaaggatgtggcc
taccgcaccgaaatctttgaaaagaaacaggccgaggtcgataaattgcacaaaaaccaa
gtccagcaattagaggtcatttcagggctttccgcagaggacgcaaaagaacaattgatg
gaatcgctaaaggagaccgctcgtaccgacgccatgggctttattcagaatacggtagag
gaggccaaacttacggcggaacaagaagctaggaaaatagttatcaataccattcagcgt
atcggtaccgaagaggcagtcgagaactgtgtgtcggtctttaacctcgaatcggacgac
gtaaaaggacgtattattggtcgggaaggacgaaacattcgggccttagaggcggccacc
ggtgtggaaattattgttgacgataccccggaggccattattctttcctgttttgattcc
gttcgccgcgaggttgccagactgtctttgcacaagttggtcaccgatgggaggattcat
cccgctcgggtcgaggaaatcgtaaagaaaaccgaaaaacaaatagaacaggaaatcgtt
gaggtagggaaacgtaccgtaatcgatttgggtatccacggactgcatccagagcttatt
agggcggtcggtagaatgaaataccgatcttcttatggacagaatttgttgcaacactct
cgtgaagtggccaagctttgtggtgtgatggcagccgagttgggcctaaatccaaaattg
gccaaacgcgccgggctgttgcacgatatcggtaaagtaccgaataccgaagccgaagtg
gaaacaccgcatgccattctcgggatgcaatgggcagaaaaatatggagagaaaccagat
gtctgcaacgccataggggcgcaccacgacgaaatagaaatgaagaccttaatatcgccg
atcgttcaggtgtgtgatgccatcagtggagctcgaccaggagcaagacgccaagtgctc
gattcgtatattcaacgtctaaaggatttggaagatatcgcattcgggtttgggggtgtt
caaaaggcgtacgctattcaggccggcagggaactcagggtaatcgttgagagcgagaaa
gtaagcgatgacaaggcagcagaactgtctttcgagatttcgcagaaaatacagaccgac
atgacctatccgggtcaggttaaggtgacggtaatccgcgaaacgcgggcggtcaacgtt
gccaaataa
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