Anolis sagrei ordinatus (Brown anole): 132765380
Help
Entry
132765380 CDS
T09595
Symbol
SKIC3
Name
(RefSeq) LOW QUALITY PROTEIN: superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132765380 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asao03019
]
132765380 (SKIC3)
Messenger RNA biogenesis [BR:
asao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
132765380 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_11
TPR_12
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_8
ANAPC3
TPR_9
TPR_6
ARM_TT21_2nd
ARM_TT21_C
TPR_15
ARM_TT21_N
TPR_30
Fis1_TPR_C
BTAD
TPR_Slam
TPR_5
ARM_TT21_5th
Retrotran_gag_2
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
132765380
NCBI-ProteinID:
XP_060615657
LinkDB
All DBs
Position
Unknown
AA seq
1577 aa
AA seq
DB search
MSQLTNISSYVKQGSESSTEKCQRAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGLAAA
ELEQPDQAQGAYRKATELEPGQLLAWQGLANLYEKTNGADVREDLVNVYQKLLELYESTD
KQKWCDVCRKLVDLYQQEKKYPQVARMWHKLIKIRREEGADNAELHQLWKRLIQLLEEGT
HVQDNETQQLLLNAHEEAVNSTEPIPSEEHQKLYGEFVECLSKLPHEYAKLKTACEDMMS
LYPTASYPLEVLCLHFIQSGSLNEEALSYCQKLLGIDSRSGPALTALGIQSFHEKKYDEA
EKSLTEGLQQTSQCPVAWCYLGEVQVKMHKYKEAVHSCNQALRTLGQLHEDSSLQQHKER
ASCFKAVALLRLPGPDAADEAINSLDQVLDKNNNPKLIALKGQAYLNKGLTGEASKIAQE
LKVTHPDLAEADYLEGLIHYKEKNYSEAETSFQRAIKKETEVADFHYCLGLTYWFMSEET
RKDKSKAVTQFLKAAKLDNYLGSAFYYLGEYYRDIAGDKNRALGCYKKAFEKDRTDGDAG
AAVVDLSTELGDLNTALAILTEVTERASAGRAKWAWLRRGLYYLRAGQHSQAVADLQAAL
RADPKDANCWESLGEAYLSRGGFTTALKSFRKARELNPKSIYSIYKAAAIEQMLGKYKEA
IAEYQHILKKSKDYVPALKGLGECYFMMAKTALADYLDGKALDYIEQSLGFLARAAKHRP
EASCLWKLLGDACTCVCVITPSKVNVKILGFLIGQDKDKCLLKKSDLLSLGGRCYGRGLK
LMSSPNTWCDLGINYYHQAHHLSAVGGSKNEISELLEKSVQCLKKAVRIDSKNHLYWNAL
GVVASSKGVGNYALAQHAFIKSIQADQINVVAWTNLGVLYLTSGNIEQAHEAFKVAQSLE
PSYLTCWIGQALIAETVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLQEKGNRNTEL
YRYNILQMNAIPAAQIALTKYTERIQNDACAFTMLGYLNEYLQLKKQAGDAYQRAVQLLK
NCEDKEKYNIAMRNYGRSLCVLGHYDDAIQAYLSTDLSEFDDILGIALAYFKKGDFQESQ
KAYEKAISMVECEQDKAYILTALAIMKYKQNQVDDAKTLLFKCSILQKPNIESLQALCTL
GLIKQDATLATAALKELLKHAERKDNIFMRCLLTSAVYALQGRNQAVQRQVSRTIHSNPD
NPALWSLLSRLVPQYTPKNAKGGAVAGTVAHIHDLNHGKKALLNTAVNQLAIGCHTAENE
KNNALKNIQKAIHLSPDDPAAWSVLLAACHSENTVVCLHNTQPKRRNLEKMIVATISAKT
KENDLPVSYAQALEEWSLFEAITGLSETGRTSEAEALCTKGLQTFPEQPTLYLLLRQVQY
KPLLQSHKELPDSILEELQKAVMSNSTSITAWHWLAEVYQSQGMMVAAEMCFRKSLQLAS
QQGSWSGKLSSLLRLAKLALEICMANISNDHWPLLVQEATAEALKLTFCPLGVLLQALLQ
YNRKMGSREARRMLERVVYQPGYPETIVSVARWYLLRHLYAKDDYELIDALVANAKANRD
VRALDLNNKLAAAATAS
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaactgaccaatatcagcagttatgtcaaacaaggaagtgaaagcagcactgaa
aaatgccagagagccataagaaataaagaatacaaagaagcactgaaacactgcaagact
gttctgaaacaagaaaaaaataactacaatgcctgggtattcattggcctggcagctgct
gagctggaacaacctgaccaagcccaaggtgcctacaggaaggccactgaacttgaacca
gggcagttgctggcatggcagggactggcaaatttgtatgaaaaaacaaacggtgcagat
gtgagggaggatttggttaatgtttaccagaaactcctagaactctatgaaagcacagat
aaacagaagtggtgtgatgtctgtagaaaactggtagacctgtatcagcaagaaaaaaag
taccctcaggtggctcgaatgtggcacaagctgataaaaataagacgggaagaaggtgca
gacaatgctgagcttcatcagctctggaagagactgattcagttactggaagaaggcaca
catgtccaggataatgaaacacagcagttgctccttaatgcacatgaagaggctgtgaat
tccacagagccaattccaagtgaagaacaccagaagttatatggagagtttgttgagtgt
ttatcaaaactccctcatgaatatgctaaactgaagacggcctgtgaagatatgatgagt
ctctacccgactgcgagttatcctctggaagttctttgcttacacttcattcaatcaggc
agcttgaatgaggaggccctgagttattgtcagaaactattgggcattgattcaagaagt
ggtccagctcttactgctttaggaattcagtccttccacgaaaagaaatatgacgaagct
gaaaaaagtctaacagaaggtttgcaacagaccagtcagtgtccagtcgcatggtgctac
ttaggagaggtacaggtgaaaatgcacaaatacaaagaggctgttcattcctgcaatcaa
gccttaaggacattaggacaacttcacgaagacagttcccttcagcaacacaaagaacgt
gcctcttgtttcaaagcagtggccttgcttagacttccaggccctgatgctgcagatgaa
gcaataaattcccttgatcaggttttggataaaaacaacaatccgaagcttatagctctt
aaaggacaggcatatctaaataaaggacttactggggaagcttcaaagattgcacaggag
cttaaagtgacacatcctgatctggcagaagccgactatcttgaaggattgattcattac
aaagaaaagaactactctgaggcagaaacaagtttccagagagctattaaaaaagaaacc
gaagtggctgactttcattactgcctgggcctcacttactggtttatgagtgaagagaca
agaaaggataaatcaaaggctgtcacacagtttttgaaggcagcaaaactggacaattac
ctaggaagtgctttttattacttaggtgaatactacagagatatagctggagataaaaac
agagctcttggctgctacaaaaaggcttttgaaaaagatagaaccgatggtgatgctgga
gcagcggtggtggatttgagcactgagcttggagacttgaacactgcccttgccatcttg
acagaagtgacagaacgagcaagtgctgggcgagcaaaatgggcttggcttcgtcgtggg
ctttattacctgagagctggccagcattctcaagcagtggcagatttgcaggcagctcta
cgagcagatccaaaggacgccaactgttgggaatctcttggagaggcatatttgagcaga
ggtggcttcacaacagccctaaagtctttccgaaaggccagagagcttaaccccaaatct
atatatagtatttataaggctgcagcaattgaacagatgctaggaaaatataaagaggct
attgcagaatatcagcatatcttgaagaaatcaaaagattacgttcctgcattgaaaggt
ttgggagaatgctatttcatgatggcaaagactgctcttgctgactacttggatggaaaa
gctctggactatatcgagcaatcccttggatttttagcaagagctgcaaagcatcgccca
gaagcatcttgcctttggaaattgcttggagatgcgtgtacttgtgtttgtgttattaca
ccttccaaagtgaatgtgaaaattttaggattccttattggtcaggacaaggacaaatgt
ttgctgaagaaaagtgacctgctcagtttgggaggaagatgttatggaagaggattaaaa
ttgatgtcctccccaaatacatggtgtgatcttggaattaactactatcatcaggcgcat
cacctttcagcagttggcggcagcaaaaatgagatcagtgaactgttagagaagtctgta
cagtgtcttaaaaaagctgtcagaatagacagcaaaaaccatctttactggaatgctctt
ggagtggtggctagttccaaaggtgttggaaactatgcccttgctcaacatgcatttatt
aaatctatccaagctgaccaaattaatgttgtggcctggaccaatttgggagtcttgtat
ttaaccagtggaaacatagagcaagcacatgaagccttcaaagtagcccagtctctggaa
ccctcctacctaacgtgttggattgggcaggctctcattgcagagactgtgggtagctat
gaaactatggatctcttcaggcacactactgaactcagcatgcatactgagggagcaaaa
ggctatgcccattgggtgtgttcaaccctacaagaaaaaggcaacagaaacactgaattg
tatagatacaatattcttcagatgaatgccatcccagcagcccaaattgctctgaccaaa
tacacagaaagaatccaaaatgatgcatgtgcatttactatgcttggctatttaaatgaa
tatctccaactaaaaaaacaggcaggagatgcttaccaaagagcagttcagttgttgaaa
aattgtgaagataaagagaaatacaacatagccatgagaaattatggcagatcactgtgt
gttcttggtcattatgatgatgcaattcaggcttacttatcaactgatctctcagaattc
gatgatattctgggaattgccttggcttacttcaagaagggagacttccaagaaagtcag
aaagcttatgaaaaagcaatttccatggttgaatgtgagcaagacaaagcatatatcctc
acagccctggcaatcatgaaatacaagcagaatcaagtagatgatgcaaagactctctta
tttaaatgttctatattacagaaaccaaatatagaaagtctgcaagctctgtgcacttta
gggctgataaagcaggatgctacacttgcaacagcagcacttaaagaattattaaagcat
gcagaaagaaaggataatatttttatgagatgccttttgacatctgctgtctatgcatta
caaggcaggaatcaggctgttcaaagacaagtttcaagaacgattcacagtaacccagat
aatcctgctttatggtctctcctgtctcgactggtacctcagtatacaccaaagaatgca
aagggtggggctgtggcaggaactgttgctcatattcatgatttaaaccatggaaagaaa
gctttgttgaataccgcagttaatcaattggctataggatgtcacacagctgaaaatgag
aagaacaatgctttgaagaatatccaaaaggcaatccatctttccccagatgatccggct
gcttggtcagtgctcctagctgcttgtcattctgaaaacactgttgtttgtctgcataat
acacagccaaagaggagaaacctggaaaaaatgattgtagccacaatctcagcaaaaact
aaagaaaatgatctcccagtttcctatgcccaagctcttgaagagtggtctcttttcgaa
gctattactggcttaagtgagactgggagaacttcagaagcagaggcactctgcacaaag
ggactacaaacttttcctgagcaaccaacattgtaccttcttttaaggcaagttcagtac
aagccacttttgcagtctcacaaagagcttcctgattctatcttggaggagcttcagaag
gcagttatgtccaactccacttcaattacagcctggcattggttagcagaagtttatcag
tcccaaggaatgatggttgctgcagagatgtgttttcgaaaaagtttacagctggcatcc
cagcagggaagctggagtgggaagctctctagcctactaagacttgctaagcttgccctg
gaaatctgcatggctaacatttcaaatgatcactggccgttactggttcaagaagccaca
gcagaagctttgaagcttactttctgtccactgggtgttctactacaagctcttcttcag
tacaaccgcaaaatggggtcaagggaagcccgtcgcatgttagagagagtggtatatcaa
cccggatatccagaaaccatagtatcagtagcccgatggtatctcttaagacacttatat
gccaaagatgattatgaactaatagatgcccttgtagcaaacgccaaagctaatagagat
gttcgggcattggatctaaataacaaacttgcagcagcagcaacagcatcctaa
DBGET
integrated database retrieval system
