Australozyma saopauloensis: 88174519
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Entry
88174519 CDS
T10743
Symbol
PUMCH_003455
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
asau Australozyma saopauloensis
Pathway
asau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
88174519 (PUMCH_003455)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asau03019
]
88174519 (PUMCH_003455)
Messenger RNA biogenesis [BR:
asau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
88174519 (PUMCH_003455)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_14
TPR_16
TPR_1
TPR_17
TPR_22
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_9
Fis1_TPR_C
ARM_TT21_N
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
88174519
NCBI-ProteinID:
XP_062878492
UniProt:
A0AAX4HC56
LinkDB
All DBs
Position
4:933286..937440
Genome browser
AA seq
1384 aa
AA seq
DB search
MSLKKQLKAAKAAIDQKDGAEALECIEQVLKTDPANYFGHLFKARAYQLLHNHTSAENAF
LEAVQLEPDNLLGWRGYLQALKNGNSHEKFFQVVEQLAVRMNEQGELLELIPKEIYGYLH
AHNFKSNLEVNEIFLRAILPGTPLGALLEGRMGPTHENVRKLLALVKAAEDLQVLNAVLK
EKLRLPQQLTEQMRQQLAQLEWSYRGKSDLARLYELFISYCNDDDVRRQYEIEFLRYQHS
MLRITPEKELLLVKVKEMAADLVLLDCTDIFPWLLHFDFRDDKLLADLDADLVLRFLRKF
KGDPLGLVLYLYVMSEACTIDSSYFAELKTTQNTDPVDEDEPLDEPCEGLSLDLPEVTRY
SQTEILELATQGFKGCTYSSLAHRIVVHINNFYSEYAVSLKVCADGIRKVASLLNVYGLD
LANAREDLTCQLALVYTYYEAPKNFGRALQIFDKILQSNPQNEQALIGKGLILVEKGEYT
KAESLLSGVVKEFPGNSQALNDLGWCLILQENYTQGRESLQKALTNVSGMSLRAFDLRAS
ISWRMATSYLREDSNLESNVKLAYDLVLSSLSNSKFHAPSYTLLGTILHDHYGDVARAQK
CFYKAFELDVAEITAARYLVTELCAKRDWDVVEILCERVVESEKSRKVLFSQLNTDPDRS
WPYRVLGCSALNKQDDAKAIEWFQTALRMQAMDIECWTGLGEAYFNCGRIDAAIKVFQHT
TELDGCTWVNYYMLGQGVCIIGDYPSGLELLEKALGLNPDAECIVSAIYEQSTLYSVQLL
QGGFTGRAVEYNTRAIATIAKAVIKSKDSFNLWKVLGDCISLICKIQQKLADAPLETIFS
ILEHAESIDDSTVNLALARKHLENEQFIDCVSVLGVLTAKAALSKVQKRENRLIRSSVLF
NLGLAYVNAFHVGQEKNTDFRDQAIVTLKDAIVIEPQNSQYWLTLGIAYVTLNPSLLQHC
FIKASVLDSKDVTPWSNLAALYLRCGDAVLAQEAFDRATSVAPEQAVPWLGKALSADVLG
DTETSTRLTTHAQVLSNGTDPLAQLCYAIVVVSNRILKSSDSRDVSAAQEVSIANAAIRR
FLKFQPENLTGLKLAFLLSERCHTFEISIEVGELLCSALETSYEKTESSQTMIEVAVAKT
QLARVMLGCGKYDEAVGYAQFTIDLLLDETSSEEIAKALLSSRIVIGLAFFFNGQYSEAL
EEFQVILEEHSQSHRAVTLIAQVLYAIDSPESKQAAVDHLFSFIEENGSSLLVVMALGAI
SLAENLDTYFEAIKEELEGLSLTDLMGDSRKAVPRLLEELNSVIGKKDSKVWQRFALLFP
GDFKVWEKLNVQMGLSSSLLSEAKASAPEVSAAYIEKKTRREVQRSLLIYAGNQSARDIL
ADVN
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaaaaaagcaactcaaggctgcaaaagcggcaattgaccagaaagacggcgcc
gaggccctcgaatgtatagagcaagtgctcaaaaccgacccggccaattatttcggccat
cttttcaaggccagagcgtaccagcttcttcacaaccacaccagcgcagaaaacgccttt
ctggaagccgtccagctcgaaccagacaatcttttgggctggcgcggatacttgcaagcg
ttgaaaaatggaaactcgcatgaaaagttcttccaggtcgtggaacagttggcggttcgg
atgaacgaacaaggagagctgttggagctgattccgaaggagatctacggctatttgcac
gcgcacaacttcaagtccaacctggaggtgaacgagatctttttgcgggccatattgccc
ggcacaccgctcggcgcgttgctagaaggcagaatgggtccaacacacgaaaacgtgcgg
aaattgcttgcgctcgtcaaggcggccgaagatctgcaggtgctcaacgcggtgctgaag
gagaagcttcgtttgccgcagcagctcacggagcagatgcggcaacagctcgctcagttg
gaatggtcataccggggcaagtccgacttggcccgtctctacgaactctttattagctac
tgtaatgacgacgacgttcgtaggcaatacgagatcgagttcttgcgctaccagcattcg
atgctccgcattactcccgaaaaggaactgttgttggtgaaggtgaaggagatggctgcg
gacttggttcttctcgattgtacagatatctttccctggctgcttcatttcgatttccgc
gacgataaactgttggcagacttggatgcggacttggtcttgcgctttttgcgcaagttc
aagggtgatccattgggacttgtgctctacctgtacgtgatgtcagaggcttgtaccatc
gactcgagttatttcgccgagcttaaaacgacccagaacacggaccctgtagatgaagat
gagccgctagatgaaccttgtgagggtttgagcctggatcttcctgaggtcacccgttac
tcgcaaaccgaaatcctcgagcttgccacacagggcttcaagggatgcacatactccagc
ttggcacacagaatcgtggtgcacatcaacaatttctatagcgagtacgcagtcagtctc
aaggtctgcgctgatggtatcagaaaggttgcaagcctgttgaatgtctacggcctcgat
ctcgcgaatgcccgcgaggaccttacatgccaattagccctcgtgtatacatactacgaa
gctcccaagaatttcggaagggcactccagatcttcgacaaaatccttcaaagtaatcca
cagaatgagcaggctctcatcggaaaaggattgatcttggtggagaagggagagtacaca
aaggcagaaagccttctttccggcgttgtcaaagagttcccgggaaacagccaggcactc
aatgatcttggctggtgcctcatccttcaggagaactacacccaaggtagagagtctctt
caaaaggctttgacaaacgtttctggaatgagtctgcgcgcttttgacttgcgcgccagt
atctcctggcgcatggctacgtcctatttgcgtgaagattccaacctggagtcaaacgtg
aaattggcgtatgaccttgtcctctcgtcccttagcaacagtaaattccacgctccatca
tacacccttttgggtacgatactacacgatcactatggagacgtagcgcgtgcgcaaaag
tgtttctacaaggcgtttgaattagacgtggccgaaataaccgctgctagatacttggtg
acagaattgtgcgccaagagagactgggatgtcgttgagattctatgtgagagagtggtt
gaatcagagaagagtcgaaaggttctcttcagccagttgaatacagacccggatcgatca
tggccttacagagtcttaggctgctctgcactcaataaacaggacgatgctaaagcaatt
gagtggtttcaaaccgccttgagaatgcaggccatggatattgagtgttggaccggtctt
ggagaagcgtacttcaactgtgggcgtatcgacgcagctatcaaggttttccaacataca
actgagttggatggctgtacatgggtaaactactacatgttaggacaaggtgtgtgtatc
attggagactacccaagtggtctcgaattgctcgaaaaggctttgggattgaatccggat
gcagaatgtattgtcagtgcaatctacgaacagagcacattatacagcgtccaattacta
caaggtggatttaccggacgcgcggttgagtacaatacgagagcaattgctactattgcc
aaggccgtcataaagagcaaagattccttcaatttgtggaaagtgttgggcgattgtatt
agtctcatttgcaaaattcaacagaaacttgcagacgcgccactagagaccatattctct
attttggaacatgcagagagtatcgatgattcaactgtgaatttggctttggccaggaaa
catcttgaaaacgagcaatttatcgactgtgtctccgtgttaggagttttgacggctaag
gccgcactcagcaaagttcagaagcgggaaaacagattgattcgctcttcggtgctcttc
aatcttggtcttgcctacgtcaatgctttccatgttggccaggaaaagaacaccgatttc
cgtgaccaagccattgttaccttgaaagatgcaatagtgattgagcctcaaaacagtcaa
tactggctcactttgggtattgcctatgtgaccttgaacccttctctcctgcagcattgt
ttcattaaagctagtgtcttagactcgaaggatgtcacgccatggtccaacttggctgcc
ttgtacttgagatgtggagatgcggtccttgcccaggaagcctttgatcgtgctacctca
gttgccccagagcaagctgttccctggttgggtaaggcactttctgctgatgttttaggt
gacacagaaacatcgaccaggctcacgactcacgcgcaagtactttccaatggaaccgac
ccactcgcacagctctgttacgccatagtggttgtcagcaatcgaatcctgaaaagcagc
gactcgcgcgacgtgtctgccgcccaggaagtgagtattgccaacgctgctatccgcagg
ttcctcaaattccagccggaaaacttgacagggctcaagttggcattcttgctcagtgaa
agatgccacacattcgagataagcattgaggttggtgagctactctgttctgcccttgaa
acaagttatgaaaagacagaaagcagtcagactatgattgaagttgcagtcgctaagaca
cagcttgccagagttatgttgggctgcgggaagtatgacgaagctgttggctatgcccaa
ttcacaatcgacttgctcctggatgaaacttcgagcgaggaaattgccaaggcgttgctt
tcatctagaattgttatcggattggctttcttcttcaatggacagtacagcgaagcactc
gaagagttccaagtgattcttgaggagcacagccagtctcatagagcagtgacattgatt
gcacaggtcttgtacgcgattgatagtcccgagtccaagcaggcagcagtagaccacctc
ttctctttcatcgaagagaatggctcgagtcttttggtggtgatggcgctcggagccatc
tccttggcagagaatttggacacatatttcgaagccattaaggaggagctagagggattg
tcgctcacagatctcatgggcgattccagaaaggctgtgcccagattgttggaggagctc
aacagcgtgattggcaagaaggactcgaaggtgtggcaacggtttgcgcttttgttccct
ggcgacttcaaagtgtgggagaaactcaatgtgcaaatggggctttcgtcgtctctcttg
agcgaggccaaagcatctgcaccggaagtgtccgcggcctacattgagaagaagacccga
agagaggttcaacggtcgcttttgatttacgccggcaaccaaagcgcacgggatatctta
gctgacgtgaactag
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