Brevibacillus sedimenti: IRT44_04555
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Entry
IRT44_04555 CDS
T07711
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ased
Brevibacillus sedimenti
Pathway
ased03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IRT44_04555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_04555
Enzymes [BR:
ased01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IRT44_04555
DNA repair and recombination proteins [BR:
ased03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IRT44_04555
Prokaryotic type
IRT44_04555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
UFJ62102
LinkDB
All DBs
Position
complement(976317..977018)
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AA seq
233 aa
AA seq
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MAILHNDWAELLADEFEKQYYRQLRQFLKAEYQSRTVYPDMYDIFNALHLTPYRETKVVI
LGQDPYHGPGQAHGLSFSVKPGVAPPPSLQNIFKELQSDLGCAIPNHGYLVSWAKQGVLL
LNSVLTVRAGSPNSHKGMGWEQFTDRVIAVLNERETPMVFILWGRHAQEKAAFIDKQKHC
VIQSPHPSPFSANRGFFGSRPFSRANRFLREQGLGEIDWQLPLQVELTAAGEQ
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttgcacaacgattgggccgaactgctggcggacgaatttgaaaaacagtac
taccggcagttgcggcagttcctgaaggcggaataccaaagccgcaccgtgtatcccgac
atgtacgacattttcaacgcgcttcatctgacgccgtaccgggaaaccaaagtggtgatt
ctcggtcaggacccgtatcacggaccgggacaagcccacggcctcagcttttccgtcaaa
ccgggggttgcgcctccgccatcactgcaaaacatcttcaaggaactgcagagcgatctg
ggctgtgccatccccaatcacggctatctggttagctgggcaaaacagggggtcctgctg
ctcaactcagtgctgaccgtgcgcgcgggcagccccaactcgcacaaggggatgggctgg
gagcagtttaccgaccgggtcattgccgtcctaaacgagcgggaaacgccgatggtcttt
attctctgggggcgtcacgcgcaggaaaaagcagcgtttattgacaagcaaaagcattgt
gtcattcaatccccgcatccaagcccgttttcggccaaccggggctttttcggcagccgg
ccgttttccagggccaaccgctttttgcgggagcagggcttgggcgaaatcgactggcag
cttcccctacaggtggaactaaccgccgcaggagagcagtaa
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