Anoxybacillus sediminis: IRT44_11790
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Entry
IRT44_11790 CDS
T07711
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ased
Anoxybacillus sediminis
Pathway
ased03410
Base excision repair
ased03430
Mismatch repair
ased03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ased00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IRT44_11790 (recJ)
03430 Mismatch repair
IRT44_11790 (recJ)
03440 Homologous recombination
IRT44_11790 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ased03400
]
IRT44_11790 (recJ)
DNA repair and recombination proteins [BR:
ased03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IRT44_11790 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IRT44_11790 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IRT44_11790 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF4254
Motif
Other DBs
NCBI-ProteinID:
UFJ60000
LinkDB
All DBs
Position
2430663..2433020
Genome browser
AA seq
785 aa
AA seq
DB search
MLKAKTRWQLAAYDEILADEIARECGLSPLIARLLVIRGIDSPQRARAFLEPGPELFHPP
FLLDGMEESVHRIRQAIERNEPICIYGDYDADGVSSTSLMVHVMRQLGAVFDCYIPNRFT
EGYGLHKDALAHLKESGFKLIVTVDTGNSAVEQVAFANQLGLDVIVTDHHEPPAVLPEAF
AVINPKKPGCPYPFDMLAGVGVAFKLAHALLGEPPLHLADLAALGTIADLVPLVDENRVL
ARIGLQRLNHTRNIGLQALIRVCGLTDSELTAGHVGFALGPRLNAGGRLETAEAAVKLLT
TQDPEEAEQCARILDNLNRERQELVQAITDEAVQMVSEQFPLEENRVLVLAKEGWNVGVV
GIVASRLVEMFYRPTIVLGIDREKGTAKGSARSIAGFDMYEALTACKEWLPHYGGHTMAA
GMTLPIENLEPLRQQLNRLAAEWLTDEDFVPLTKADVTLDLAEISLDTAEQLEQLAPFGM
GNPTPLVLVRDVETSGMRTIGRDDSHLKCSLCKDGGSVDAIGFNWAHVVSEVTPKARFDV
LAELSVNEWNGHRKPQLTIRDLAVPHRQVFDWRGCRDKQERWRQLAARHEMLTILFRRES
YDELAAGLAAAGQPERLLVVADEAWDGHLPAVPTVVLYDLPKRRYDLTRVLARLEQAERI
YCLFGDPDLGAERLSCPGREQFKALYQFLLQVPCVQRIHLDALARRLKLKRDVLDGMLAV
FAELEFIRSDEESFRLQPDAAKRPLDDSRYYAEWKEEAELATELLLSSYDSLIHHFQQQV
ETVTW
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagcgaaaacacgctggcaactggccgcgtatgacgagatattggcggacgaa
attgcccgggaatgcggattgtctccgctgatcgccaggctcctggtcatccgtggtatc
gattcgccgcagcgggcgcgtgcctttctcgagccagggccggagttgtttcaccccccg
tttctgcttgacgggatggaagagagcgtgcaccggattcgccaggcaattgagcggaac
gaaccgatttgcatttacggcgactacgacgcagacggtgtcagttccacgtcgttgatg
gttcatgtcatgcgccaattgggcgcagtgtttgactgctacattcccaaccgctttacg
gaagggtacggtttacataaagacgcactggcccacctcaaggaaagcggtttcaagttg
attgtcaccgttgacaccggcaacagcgcggtggagcaggtggcatttgccaaccaactg
ggtctggatgttatcgtgacggatcaccacgaacctccggcagtgttaccggaggcattt
gccgtgatcaacccgaaaaagccgggctgcccgtatccgtttgacatgctggccggcgtt
ggggtggcgttcaagctggcccatgcactgctgggagagccgccgctgcatctggctgat
ctcgccgcgctgggcacgatcgccgacctcgtcccgttggtggatgaaaatcgggttctc
gcccgtatcgggctgcagcggctcaatcatacacgcaacatcggactgcaggcgttgatt
cgcgtttgcggcctgacggacagcgaattgaccgcgggccacgtcggctttgccctcgga
cctcgtctcaacgcaggcgggcggctggagacggccgaagcggccgtgaaattgttgacg
acgcaggaccctgaggaagcagagcaatgtgcccgaattctggataaccttaaccgtgag
cggcaggaactggtgcaggccatcaccgacgaggccgtgcagatggtgagcgagcagttt
cccctggaggaaaatcgcgtgctcgttctcgccaaggaaggctggaacgtcggggtggtc
ggcatcgtcgcttcccggctggtggagatgttttaccggccgacaatcgtgcttggaatt
gatcgggaaaaaggaacggccaaaggttccgcccgcagcattgccggtttcgacatgtac
gaagcgctgacggcgtgcaaagagtggctgccccactacggcggtcacacaatggcggct
ggcatgacactgccgatcgagaatctcgaaccgctgcgccaacagcttaaccggctggcc
gccgagtggttgacggacgaagacttcgtgccgctgaccaaggcggatgtcaccttggac
ctcgcggaaatcagtctcgacacggcggagcagttggaacagctggcgccgtttgggatg
ggcaaccccacgccgctggtgctggtgcgggatgtggagacgtccggcatgcgcacgatc
ggccgagacgacagccatttgaaatgctcgctctgcaaggatggcggcagcgtggatgcc
attggcttcaactgggcccatgtcgtcagcgaagtgacgccaaaagcgcggtttgacgta
ttggcggagctgtctgtcaacgagtggaacggccatcgcaagccgcagctgacgattcgc
gatctcgccgtgccgcacagacaggtttttgactggagggggtgccgcgacaaacaggaa
cggtggcggcagttggccgcccggcatgagatgctgaccattctgttccggcgggaaagc
tacgatgagctggccgctggattggccgcggcggggcagccggaaaggctcctcgttgtc
gcagatgaggcgtgggacggtcatctgccggccgtgccgacagtcgtgctctacgatctg
ccgaagcggcgatacgatctgaccagagtgctggcccgcctcgaacaggcggagcggatc
tactgtctgttcggcgatcccgatctgggggcggagcggctgtcctgtccgggacgtgag
cagttcaaggcgctgtaccagtttttgctgcaggtcccctgcgtccagcggatacatctg
gacgccctggcccgtcggttgaagctgaagcgggatgtcttggacggcatgctggccgtg
tttgcggagctggagtttatccgctcggacgaagagagcttccgcctgcagccggatgcg
gcgaaacggccgctggatgactcccgctactatgcggagtggaaggaagaggcggaactg
gcgacagaactcctgctttcctcatatgactctttgattcaccattttcaacaacaggtg
gagactgtcacctggtag
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integrated database retrieval system
