Aggregatibacter segnis: NCTC10977_00701
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Entry
NCTC10977_00701 CDS
T06075
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
aseg
Aggregatibacter segnis
Pathway
aseg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aseg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10977_00701 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aseg03400
]
NCTC10977_00701 (uvrA)
DNA repair and recombination proteins [BR:
aseg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10977_00701 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC10977_00701 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_21
AAA_23
nSTAND3
AAA_25
Viral_helicase1
APS_kinase
NACHT
cobW
ScfRs
zf_C2H2_10
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
SQH64180
LinkDB
All DBs
Position
1:complement(674765..677596)
Genome browser
AA seq
943 aa
AA seq
DB search
MDTIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PHHNVPLTAQTISQMVDKVLSLPEESKMMLLAPVVKERKGEHVKLLQQIAAQGYIRARID
GEICDLSDPPKLELQKKHTIEVVVDRFKVRSDLATRLAESFETTLELSGGTAVVAYMDDP
KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPSI
SLANGAIKGWDRRNFYYYQMLTSLAKHYHFDIETPFEELPKKIQQIILHGSGKEEIEFQY
MNDRGDVVLRHHVFEGILNNMARRYKETESMSVREELAKHISNRPCTDCGGSRLRPEARN
VYIEQTNLPDVSEKSIGEALSFFGELQLSGQKAQIAEKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT
VIVVEHDEDAILSADHIIDIGPGAGVHGGNVIAEGTAQQIMQNPNSLTGKFLSGAEKIEI
PKKRTALDKKKTLKLFGASGNNLKNANLEIPVGLFTCITGVSGSGKSTLINDTLFPIAQN
TLNRAENAEAAPYKSIEGLEFFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEAREFFDAVPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGQIIATGTPEQVAKVEGSHTARFLKGILAKG
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataccatcgatattcgtggtgcaagaacccacaatctaaaaaatattaacttaacg
attccacgcgacaagctcattgttattaccggtttatccggatcaggtaaatcttcttta
gcctttgatacgctgtatgcggaagggcaacgccgttatgtggaatccttgtccgcctat
gcgcgtcaatttttgtcattaatggaaaaacccgatgtagatcatattgaagggctttca
ccggccatttctattgagcaaaaatctacctcacacaacccgcgttcaacggtgggtacc
attaccgaaattcacgattacctgcgtttgttgtttgcccgcgtgggtgagccgcgctgt
cctcatcacaatgtgccactcacggcacaaaccatcagccaaatggtggataaagtgctt
tctctgcctgaagaaagcaaaatgatgttgttggcgccggtggtaaaagagcgcaaaggt
gagcacgttaaattattacaacaaattgctgcgcaaggctacattcgtgcccgtattgat
ggtgagatttgcgatttgtctgatccgccaaaactggaattacagaaaaaacataccatc
gaagtagtggttgatcgctttaaagtgcggtcggatttagccacaagattggcggaatcc
tttgaaaccacgctcgagctttccggtggcacggcggtcgtcgcgtatatggacgatccg
aaggcggaagaactggtgttctctgccaactttgcctgcccacactgcggctattcggtg
ccggaactggaacctcgtctcttctcctttaataaccccgccggtgcgtgcccgacttgt
gacggtttgggcgtacaacaatatttcgatgaaaaacgcgtggtacaaaatccgagtatt
tcccttgctaatggcgctattaaagggtgggatcgtcgcaatttctattattaccaaatg
ctcacgtccttggcaaaacactaccatttcgatattgaaacgccttttgaagaactgccg
aaaaaaattcaacagattattttgcacggttccggcaaggaagaaattgaattccaatac
atgaacgatcgcggcgatgtcgtgttgcgccaccatgtattcgaaggcattttaaacaac
atggcgcgccgttataaagaaacggaatccatgtcagtgcgcgaagaacttgccaaacac
atcagcaatcgcccttgcaccgattgtggcggttcgcgtctgcgtcccgaggcgcgtaac
gtttatattgagcaaaccaatctgcctgatgtctcggagaaaagcatcggggaagccttg
agcttttttggagagctacagctgagcggacaaaaagcgcaaatcgccgagaagattctg
aaagaaatcaaagagcggttacaatttttggtgaatgtcggcttgaattatctttccctt
tcccgctccgccgaaaccctttcaggcggtgaagcgcaacgcattcgtcttgccagccaa
attggtgcgggcttagtcggtgtgatgtacgtattggatgaaccgtctatcggtttgcat
caacgggataacgaacgcttgctcaacaccttgattcacttacgaaatctcggcaacact
gtgattgtggtggaacacgatgaagatgccattttaagcgccgaccacattatcgacatc
ggcccaggtgcgggtgtgcatggtggcaatgttattgccgaaggtacggcgcaacaaatc
atgcaaaatccaaactcgcttacaggtaaattcttatccggcgcagaaaaaatcgaaata
ccgaaaaaacgtaccgcacttgataagaaaaaaacactcaaattgttcggcgcatcaggc
aataatctgaaaaacgccaacttagaaattccggtgggcttatttacctgtatcaccggc
gtgtccggctcaggcaaatccacgttgattaacgataccttgttcccgattgcccaaaac
acgttaaaccgtgcggaaaatgccgaagcagcaccgtataaatctatcgaaggtttggaa
tttttcgacaaagttatcgatattgaccaaagcccaattggtcgtactccgcgctctaac
cctgcaacctacaccggcgtgtttaccccgattcgtgaactgttcgccggcgtgccggaa
gcccgagcacgcggctacaatccgggacgtttcagttttaacgtacgcggtggacgttgc
gaagcctgtcagggtgacggtgtaatcaaagtggaaatgcacttcctgccggatgtgtat
gtgccatgcgaccaatgtaagggcaaacgctacaaccgcgaaaccttggaaattcgctac
aaaggcaaaaccattcatcaagtgttggatatgaccgtggaagaggcgcgggaatttttc
gatgcagttccgatgattgcacgcaaactgcaaacgctgatggacgtaggcttgtcttac
atccgcttgggccaatcttccactaccctctccggtggtgaagcgcaacgggtgaaattg
gcaacagaactctccaaacgggatacgggaaaaaccttgtatattctggacgaaccaact
accgggctacactttgccgacatcaaacaactgctttccgtgttgcaccgcttgcgcgat
cagggtaataccatcgtggtcattgagcacaatttagacgtgattaaaaccgctgactgg
attgtggatctcggcccggaaggcggtagcggcggcggacaaattatcgccaccggtacg
ccggaacaggtcgctaaagtagaaggttcgcataccgcgcgattcctgaaagggattttg
gcgaaaggttaa
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