Actinoplanes sichuanensis: Q0Z83_017010
Help
Entry
Q0Z83_017010 CDS
T09497
Symbol
pelA
Name
(GenBank) pectate trisaccharide-lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
asic
Actinoplanes sichuanensis
Pathway
asic00040
Pentose and glucuronate interconversions
asic01100
Metabolic pathways
asic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q0Z83_017010 (pelA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q0Z83_017010 (pelA)
Enzymes [BR:
asic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Q0Z83_017010 (pelA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
BEL03510
LinkDB
All DBs
Position
1941192..1942106
Genome browser
AA seq
304 aa
AA seq
DB search
MHGILAALLLGSGLVNPMAAAAPDGFAAGTTGGVGGATVVVDTTDELLTAIDTVGPLVIQ
VSGTIAITSKQGVRPNKTIVGLGSNATITGGGFDFYKSYNVIVRNLTFVDAEDDAINVGQ
QSHHIWIDHNTFVRPVDGSIDIVRGADYVTVSWNHFAGTDKSMLIGHSDGASGTDVGHLK
VTIHHNWFDGSRQRHPRVRFGEPVHVYNNYFDGNELYGIASTMNGGVVAEANHFANVPYP
CFSTGGYADSGPGRLVQRSNVFTSSGACQAGGTVVEPSTYYSYTLDPASSVPSLVSAGAG
AGRI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcattctggcagcgcttcttctcggttccggcctggtgaacccgatggcggcc
gccgccccggacgggttcgcggccggcaccaccggcggggtcggcggggccaccgtggtc
gtcgacacgaccgacgaactgctgaccgcgatcgacacggtcggtccgctggtcatccag
gtgtccgggaccatcgcgatcaccagtaaacagggtgtccgcccgaacaagacgatcgtc
ggcctcggctcgaacgccacgatcaccggcggcggcttcgacttctacaagtcgtacaac
gtgatcgtccggaatctgaccttcgtcgacgccgaggacgacgcgatcaatgtcggtcag
cagtcgcatcacatctggatcgaccacaacaccttcgtgcgcccggtcgacgggtcgatc
gacatcgtgcgcggtgccgactacgtgaccgtgtcgtggaaccacttcgccggtaccgac
aagagcatgctgatcggccactccgacggggcgtccggcaccgacgtcggccatctgaag
gtgaccatccaccacaactggttcgacgggtcgcggcagcggcatccgcgggtccggttc
ggtgagccggtgcacgtctacaacaactacttcgacggcaacgagctgtacggcatcgcg
tccacgatgaacggcggtgtggtggccgaggccaaccacttcgcgaacgtgccgtacccg
tgcttctccaccggcgggtacgccgacagcgggccgggccggctggtccagcggtcgaac
gtgttcacctcgtccggcgcctgccaggccggcgggaccgtcgtcgaaccgtccacctac
tactcgtacacgctggatccggcctcgtcggtcccgtcgctggtgtcggcgggcgccggg
gcgggcaggatctga
DBGET
integrated database retrieval system
