Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_1416
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Entry
MOUSESFB_1416 CDS
T01857
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asm03016
]
MOUSESFB_1416 (gidA)
03036 Chromosome and associated proteins [BR:
asm03036
]
MOUSESFB_1416 (gidA)
Transfer RNA biogenesis [BR:
asm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MOUSESFB_1416 (gidA)
Prokaryotic type
MOUSESFB_1416 (gidA)
Chromosome and associated proteins [BR:
asm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MOUSESFB_1416 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_2
FAD_oxidored
HI0933_like
DAO
Trp_halogenase
FAD_binding_2
Pyr_redox
AlaDh_PNT_C
Menorin_C
Motif
Other DBs
NCBI-ProteinID:
BAK80558
LinkDB
All DBs
Position
complement(1581149..1583032)
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AA seq
627 aa
AA seq
DB search
MSYLRGEFSVVVIGGGHAGIEASLASARMGVKTLLITLNLDSIGFMPCNPSIGGTAKGHL
VREIDALGGQMGLSADKCVIQARMLNMSKGPAVHSLRFQIDKVQYQNYMKYILETQENLS
IVQGEVKDIDIEKNKIKGLKLTTGSYFKCKSIVICTGVYLNSKVIIGDNIFDSGPNGLSN
SKFLTSKLVDLGMSIRRFKTGTPARVNKLSIDFSKVEVHAGDYEITPFSFLNKNIDRKQV
DCYLTYTNSETHNIIKNNIDKSPIYNGTISGIGPRYCPSIEDKIMRFGDKNRHQIFIEPE
GLNTNEMYLQGMSSSLPENIQIEMIKTIRGCENIQVMRTGYAIEYDVLDTKEFRHTLELK
SIRGLFSAGQINGTSGYEEAAAQGIVAGINAALYVKNRSPFILDRSDGYIGVLIDDLINK
GTNEPYRMMTSRAEYRLLLRQDNADLRLTDKGYEIGLVDNYRYNIFKLKVKILNDELNRI
NNVIINNSSETNRILESINSKPLKKPTTLYELIKRTELDYNILYLLDKDRPTIIDKDIID
QINVVIKYDGYIKKQEDEVKNFKKMENKLIPLNINYSDIKGLRQEAIQKLNSIRPTSIGQ
AMRISGVSPADISVLILYIELFKRNNI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttaaggggagagttttctgtagttgttataggtggaggacatgctggcatt
gaggcatctcttgcttctgcaagaatgggagttaaaactttacttataacattaaattta
gattcaattggatttatgccttgtaatcctagtataggaggaactgcaaaaggacatctg
gtgagagaaattgatgcgttaggtggacagatgggattaagtgcggataagtgtgttatt
caagcaagaatgcttaatatgtcaaaaggacctgcagttcattcattaagattccaaata
gataaagtacaatatcaaaactacatgaaatatattttggaaactcaagaaaatttaagt
atagttcagggagaagttaaggatatagatattgagaaaaataaaataaagggactaaaa
ttaacaacgggttcttattttaaatgtaagtctatagtaatttgtacaggtgtatattta
aattctaaggttataattggtgataatatatttgattcaggtcccaatggtttatcaaat
tcgaagtttttaacaagtaaattggttgatttgggaatgagtataaggaggtttaaaaca
ggaacccccgctagagtaaataagttgagtattgatttttcgaaagtagaagttcatgca
ggtgattatgaaataactccattttcatttcttaataaaaatatagatagaaaacaggta
gattgttatttaacttatactaattctgaaacacataatataataaagaataacatagat
aaatcaccaatttataatggaactataagtggtattggacccaggtattgtccatcaatt
gaagataaaataatgagatttggtgacaaaaataggcatcaaatttttatagagccagaa
ggattaaatacaaatgaaatgtatttacaaggaatgtcgtcatctttacctgaaaacata
caaattgaaatgataaaaactataagaggttgtgaaaatattcaagtaatgaggacaggt
tatgctatagaatatgatgttttggatactaaagaatttagacatacattagaattaaaa
agtattagaggattgttttcagcaggacagataaatggaacatccggatacgaagaagca
gcagcacaaggtatagtagctggaattaatgcagcattatatgtgaaaaatagatcgcca
tttatattagatagaagtgatggatatattggggttttaattgatgatcttataaataaa
ggaacaaatgaaccttatagaatgatgacatcgagagctgagtatagactattattaaga
caagataatgctgatttaagattaacagataaaggatatgaaattggtttagtagataat
tataggtataatatattcaaattaaaagtaaaaattttaaacgatgagttaaataggata
aataatgtgataataaataattcttctgaaactaatagaatattagaatctataaattca
aaaccattaaaaaaaccaactacattatatgaattaattaaaagaacagaattagactat
aatattttatacttattggataaagatagacctactataatagataaagatataattgat
caaattaatgtggtaataaaatatgacggttatataaaaaaacaagaggatgaggttaaa
aacttcaaaaaaatggagaataaattaattccattaaatataaattatagtgatataaaa
ggattaagacaagaagcaattcagaaattaaattctataagaccaactagtataggtcag
gctatgaggatatctggggtatctccagctgatatatctgttcttatattatatattgaa
ttatttaagaggaataatatatga
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