Alligator sinensis (Chinese alligator): 102371908
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Entry
102371908 CDS
T02922
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102371908 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102371908 (NDC1)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102371908 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
102371908
NCBI-ProteinID:
XP_006025862
UniProt:
A0A1U7S5A7
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All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MLLRLQKFKFPADSFNDLYTSYTIFCILLMSVVILVISIFNVEFYAVAPSIPCSRLALIG
KIIHPQQVIHSVVHAIMGMLVAWCAAVITKGRFQFLALPCTTSESLDAVVSYVCLNEYHL
FFLLFGAFVGYSYSLLYLVNNMNYLPFPIIQQYKYLRFRRSLPLLVKHSCVESLYLVRNF
CAAYYFFGYIPRAWISTTMDLRADDKIHPLDTLAGLLDLSLFYHTWLCGVFLLIPWYIAW
LLFKIYATEAYHFPVQPTFAEETDQCLPKILSSNPPLIIKFLALQDLMLLSQYSPVRRQE
VFSLSQPGGHPHNWTAISRECLNLLSDLTQKLIIHQEAAATNGRIKQPSPGEVNKPLNFP
GAAVIEEMAFQTQRSNVLPRTHMPSLVKSLSPLKTSTASDLGSSFGSPFTSPALNRKPGI
LDLNSPWHGSVQSPHIMRRGPKLWTSSSDLQTNGSYPPSFPMVSVARVGHEAEQPSFMYM
WLQNKQEQIRSFLSKRVLVMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQ
FGVVQTTLPAILNTLLTLQEVVDKHFKLPHVSSKPPRISGSLVDTSYKTLRFGLRASLRT
AIYRITTTFGEHLNAVQVSTEHKKRLQQFLEFKE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccggcttcaaaaattcaagtttccggcagactctttcaatgatttgtatact
tcctacaccattttctgcatccttctaatgtctgtagtgatactggtaataagcatcttc
aatgttgaattttatgcagttgcaccttcaattccctgctctcgattagcgctgatagga
aagattattcacccacagcaagttatccattctgttgttcatgcaataatgggaatgctg
gtggcctggtgtgcagcagttataacaaaggggaggttccagtttcttgctctaccctgc
acaacttcagaaagcctagatgctgttgtttcgtatgtgtgcctaaatgagtaccacctc
ttcttcctgctgtttggagctttcgtgggatacagttacagtctcctgtatcttgttaac
aatatgaactatttgccatttccaattatacagcaatacaagtacttacgtttcagaaga
tctttgcctctgcttgttaaacatagttgtgtggaatcactgtatctggttagaaacttc
tgcgctgcatactatttttttggttatatcccacgggcatggataagtaccacaatggac
cttcgcgcagatgataagattcatcctcttgacaccctggctggtttgctggatctctca
ctgttctaccatacctggctgtgtggtgtatttcttttgattccttggtacattgcatgg
ttactcttcaaaatctatgcaacagaggcgtaccattttcctgttcagccaacgtttgct
gaggaaactgaccagtgcttacctaaaatcttaagcagtaaccctcccctcatcataaag
ttcttggccttacaggacttgatgttactttcccagtattctcctgtgcgacgtcaagaa
gtcttcagccttagtcagccaggtgggcatccccacaactggacagcaatatcacgggag
tgcttgaatcttttgagtgacttaacccagaagctgattatacaccaggaagctgcggct
acaaatgggagaataaaacagccatctccaggggaagtaaacaaacccctgaactttcca
ggagcagctgttatagaagaaatggcttttcagacacaaaggtctaacgtcttacctaga
actcacatgccttccctggttaaatccctgtcgcctttaaagacatcaactgcatcagac
cttggaagctcttttggctcacctttcacttctcctgctctaaatcgcaagcctggaatc
ctggatttaaattctccttggcatggatcagttcaaagccctcatattatgagaagagga
ccaaagctgtggacatcaagttcagatctgcaaacaaatggttcttacccgccatccttc
ccaatggtctctgttgcaagagttggtcatgaagcagagcagccaagttttatgtatatg
tggctacagaacaaacaggagcagataagaagtttcttgtcaaaacgagtgctggtcatg
tatttcttcagcaagcatccggaggcctcaatccaagctgtcttttctgatgctcaaatg
cacatttgggcattagaaggtctgtctcatttggtagcagcatcatttactgaagatcaa
tttggagttgtccaaactacactgccagctattctgaataccttgctgacccttcaggag
gttgtagataaacatttcaagctgccgcatgtttccagcaaacctccaagaatttcaggc
agtctggtggatacatcctacaaaacactacggtttgggcttagagcatccctgaggact
gccatataccggataacaactacttttggagaacacttgaatgctgtgcaagtgtctaca
gagcataagaaaagacttcagcagttcttggagttcaaagaataa
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