KEGG   Alligator sinensis (Chinese alligator): 102371908
Entry
102371908         CDS       T02922                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:asn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102371908 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asn03019]
    102371908 (NDC1)
Messenger RNA biogenesis [BR:asn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102371908 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 102371908
NCBI-ProteinID: XP_006025862
UniProt: A0A1U7S5A7
LinkDB
Position
Unknown
AA seq 634 aa
MLLRLQKFKFPADSFNDLYTSYTIFCILLMSVVILVISIFNVEFYAVAPSIPCSRLALIG
KIIHPQQVIHSVVHAIMGMLVAWCAAVITKGRFQFLALPCTTSESLDAVVSYVCLNEYHL
FFLLFGAFVGYSYSLLYLVNNMNYLPFPIIQQYKYLRFRRSLPLLVKHSCVESLYLVRNF
CAAYYFFGYIPRAWISTTMDLRADDKIHPLDTLAGLLDLSLFYHTWLCGVFLLIPWYIAW
LLFKIYATEAYHFPVQPTFAEETDQCLPKILSSNPPLIIKFLALQDLMLLSQYSPVRRQE
VFSLSQPGGHPHNWTAISRECLNLLSDLTQKLIIHQEAAATNGRIKQPSPGEVNKPLNFP
GAAVIEEMAFQTQRSNVLPRTHMPSLVKSLSPLKTSTASDLGSSFGSPFTSPALNRKPGI
LDLNSPWHGSVQSPHIMRRGPKLWTSSSDLQTNGSYPPSFPMVSVARVGHEAEQPSFMYM
WLQNKQEQIRSFLSKRVLVMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQ
FGVVQTTLPAILNTLLTLQEVVDKHFKLPHVSSKPPRISGSLVDTSYKTLRFGLRASLRT
AIYRITTTFGEHLNAVQVSTEHKKRLQQFLEFKE
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgctgctccggcttcaaaaattcaagtttccggcagactctttcaatgatttgtatact
tcctacaccattttctgcatccttctaatgtctgtagtgatactggtaataagcatcttc
aatgttgaattttatgcagttgcaccttcaattccctgctctcgattagcgctgatagga
aagattattcacccacagcaagttatccattctgttgttcatgcaataatgggaatgctg
gtggcctggtgtgcagcagttataacaaaggggaggttccagtttcttgctctaccctgc
acaacttcagaaagcctagatgctgttgtttcgtatgtgtgcctaaatgagtaccacctc
ttcttcctgctgtttggagctttcgtgggatacagttacagtctcctgtatcttgttaac
aatatgaactatttgccatttccaattatacagcaatacaagtacttacgtttcagaaga
tctttgcctctgcttgttaaacatagttgtgtggaatcactgtatctggttagaaacttc
tgcgctgcatactatttttttggttatatcccacgggcatggataagtaccacaatggac
cttcgcgcagatgataagattcatcctcttgacaccctggctggtttgctggatctctca
ctgttctaccatacctggctgtgtggtgtatttcttttgattccttggtacattgcatgg
ttactcttcaaaatctatgcaacagaggcgtaccattttcctgttcagccaacgtttgct
gaggaaactgaccagtgcttacctaaaatcttaagcagtaaccctcccctcatcataaag
ttcttggccttacaggacttgatgttactttcccagtattctcctgtgcgacgtcaagaa
gtcttcagccttagtcagccaggtgggcatccccacaactggacagcaatatcacgggag
tgcttgaatcttttgagtgacttaacccagaagctgattatacaccaggaagctgcggct
acaaatgggagaataaaacagccatctccaggggaagtaaacaaacccctgaactttcca
ggagcagctgttatagaagaaatggcttttcagacacaaaggtctaacgtcttacctaga
actcacatgccttccctggttaaatccctgtcgcctttaaagacatcaactgcatcagac
cttggaagctcttttggctcacctttcacttctcctgctctaaatcgcaagcctggaatc
ctggatttaaattctccttggcatggatcagttcaaagccctcatattatgagaagagga
ccaaagctgtggacatcaagttcagatctgcaaacaaatggttcttacccgccatccttc
ccaatggtctctgttgcaagagttggtcatgaagcagagcagccaagttttatgtatatg
tggctacagaacaaacaggagcagataagaagtttcttgtcaaaacgagtgctggtcatg
tatttcttcagcaagcatccggaggcctcaatccaagctgtcttttctgatgctcaaatg
cacatttgggcattagaaggtctgtctcatttggtagcagcatcatttactgaagatcaa
tttggagttgtccaaactacactgccagctattctgaataccttgctgacccttcaggag
gttgtagataaacatttcaagctgccgcatgtttccagcaaacctccaagaatttcaggc
agtctggtggatacatcctacaaaacactacggtttgggcttagagcatccctgaggact
gccatataccggataacaactacttttggagaacacttgaatgctgtgcaagtgtctaca
gagcataagaaaagacttcagcagttcttggagttcaaagaataa

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