Alligator sinensis (Chinese alligator): 102372390
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Entry
102372390 CDS
T02922
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102372390 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asn03036
]
102372390 (MBD4)
03400 DNA repair and recombination proteins [BR:
asn03400
]
102372390 (MBD4)
Chromosome and associated proteins [BR:
asn03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102372390 (MBD4)
DNA repair and recombination proteins [BR:
asn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102372390 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102372390
NCBI-ProteinID:
XP_006024196
UniProt:
A0A1U7S4E0
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MAASEVGEQGKGSDQSDMQTKDEGNQLVTETEEHFDSQTEGTETIAENSLLCKEDAAVVS
EVVVACHKVAPNGWEKITKQRQSGKTAGKYDVYFISPEGVKLRSKRALVEYFHKTGETGL
KLEDFDFTTPAQSNTKVRDKKCSAKAVKTAIQKKEHDNTKQEFSAQNGKGGGSVQVLQTI
DEEQENISVTFTQGTEDLVVKECKPKDDSLEVKENGIIEKRVQIKKARKRSEKKNPACTQ
NKRQRKIPCNKQEVEINKSKAFQRENNACASDSGDQNSDDVDTGKCGGDSGNALTSGSQS
EVNLGAVLAHSEEASGTTVELACSERSSDDTATKDSEENSAESEFGQGKDEMLLQSQDFK
SNAQTEISSSQPCGKKSLTSVKLLKEDYGPRTQVDRRKTSPYFSSKYNKEAPSPPRRKAL
RKWTPPRSPFNLVQEILFHDPWKLLIATIFLNKTSGKMAIPALWEFLEKYPSPEVTRTAD
WKEVSELLKPLGLYELRAKAIIKFSDEYLSKQWKYPIELHGIGKYGNDSYRIFCVNEWKE
VRPQDHKLNIYHAWLWENYEKLSLD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggaagtaggggagcaaggaaagggcagtgaccaaagtgacatgcaaaca
aaagatgaaggaaaccagttagtgacagagacagaagaacattttgattcacaaactgaa
ggtactgagaccatagcagagaacagtctcctgtgtaaagaagatgcagctgttgtctct
gaagtggttgttgcatgtcacaaagtcgctccaaatggatgggagaagatcacaaagcaa
agacaatcaggcaaaactgcaggaaaatatgatgtttattttatcagtcctgaaggagtg
aagttaagatccaaacgtgcacttgtagagtattttcataaaactggagaaaccggtctt
aaactagaagattttgattttactactcctgctcaaagtaataccaaggtgagagacaaa
aaatgcagtgcaaaagctgtgaaaaccgcaatacagaaaaaggaacatgacaatacaaaa
caagagtttagtgcacaaaatggtaaaggcggtggtagtgttcaggtacttcagactatt
gatgaagagcaggaaaacatttctgtcacgttcacccagggaacagaagacttggtcgtt
aaagaatgtaaaccaaaggatgattctttggaggttaaagaaaatgggataattgaaaaa
agagttcaaattaagaaagctagaaaaaggtcagaaaaaaagaatccagcttgtacccag
aacaaaagacagagaaaaataccgtgtaataaacaagaagttgaaataaataaaagcaaa
gcattccagagagagaataatgcttgtgcttctgatagtggtgatcagaactcagatgat
gtggatacaggaaagtgtgggggagactcaggaaacgcattgacatcgggctcccaatca
gaggtgaatcttggagcagtcttagctcactcagaagaggcatcaggaaccacagtggag
ttagcctgctcagagaggagttctgatgatacagctacaaaagactctgaggagaactct
gcagaatcagaatttgggcaggggaaggatgaaatgcttttgcagagccaggacttcaaa
tctaatgctcaaacagaaatcagcagttcacagccttgtggcaagaaaagtttgacatca
gttaagttgctgaaagaagattatggcccaagaacacaggtggacagaaggaaaaccagc
ccatatttttccagtaaatacaataaagaagctccaagcccacctaggcggaaggccttg
agaaaatggactcctcctcggtctccttttaatttggtccaagaaatactctttcatgat
ccctggaaactcctcattgcaaccatatttctcaacaaaacttcaggtaaaatggcaatc
cctgcactctgggagtttctggagaaatacccttctcctgaagtcacaagaacagctgac
tggaaggaagtgtcagagttgcttaaacctcttggcctctatgaactgagagcgaaggcc
attatcaagttttcagatgagtatctgagcaagcaatggaagtaccctattgaactgcat
ggaattggaaaatatggaaatgattcctacagaatcttttgtgttaatgagtggaaggag
gtacgcccacaagatcacaaactaaatatatatcatgcctggctctgggaaaattatgaa
aaactgagtcttgattga
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