Alligator sinensis (Chinese alligator): 102380319
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Entry
102380319 CDS
T02922
Symbol
CNOT1
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102380319 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102380319 (CNOT1)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102380319 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102380319 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
102380319
NCBI-ProteinID:
XP_006020256
UniProt:
A0A1U7RWF1
LinkDB
All DBs
Position
Unknown
AA seq
2374 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGTQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDNKGLQIVVFGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFITACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SLGGSAXXXXXXXXXXQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLP
VGGLTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQTDLSQVWPEANQHFSK
EIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFF
PQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDRFK
NRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQA
QAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLVAT
DQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIE
PNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMI
TLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMAI
MNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKD
VKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPAIPL
FQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVAAH
HMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQENCEL
ACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVG
GVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELEQH
LQSIPHTLTMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADLLL
RYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQY
DLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNA
PEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNL
YHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPA
ANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHEVRQ
SEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELI
SHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVL
LHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAP
RILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVLYV
GTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH
YFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEF
VHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctttcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactacagagccagccagcaggaaatacaacatattgtgaatcgacacggt
cccgaggcagacaggcatttacttcgctgtctattctcacatgtggatttcagtggcgat
ggtaaaagcagtggtaaagatttccatcagactcagtttctgatccaagagtgtgcatcc
ctgatcacaaagccaaactttatctcaacactgtcctacgccattgacaatccattgcac
tatcaaaagagtctaaagccttcaccccatctatttgcccaactgagtaaagttatcaaa
ttaagtaaagttcaagaggtgatttttggtcttgctttactgaactctttcagctcagat
ctcagaggttttgcggctcagtttatcaaacagaaacttccagatcttctgcgctcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaagtc
ctgcaccttctcctctctcatctcctttttgggcagaagggagcctttggggtcggacag
gaacagattgacgctttccttaaaacattacgtagagattttccccaagagcgctgtcct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagctctctggcagactttatgcaa
gaagtaggctatggcttttgtacaagtgttgaagaatgtcgcaatataatcatgcagttt
ggtgtgcgggaggtcactgcttctcaggttgccagagttttgggaatgatggcccgaact
cattcagggttgacagatggtattccattacaatccatctcggctcctggcagtgggatc
tggagtgatgggaaggacaaaagtgatggaacacaagctcacacctggaatgtggaggtt
ttaatagatgttcttaaagagttgaatcctagtttgaacttcaaggaagtaacctatgag
ttggaccacccagggtttcaaatccgtgacaacaagggtctgcagattgtggtgtttggc
atccagagagggctaggcatggaagtcttcccagttgatctcatatataggccttggaaa
catgcagagggccagctctccttcattcagcattctctcataaatccagagatcttctgt
tttgctgactacccctgtcatactgttgccacagacatccttaaagcgccaccagaggat
gacaatcgagaaattgccacctggaagagcctggatttgatcgaatccttgttgcgtttg
gcagaggtggggcagtatgagcaggttaagcagctcttcagttttcctatcaagcactgc
ccagatatgttggtattggccttattacagatcaacacttcctggcataccttgcgccat
gagctcatctccacgcttatgccaatttttcttggcaatcaccccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcaattcgccaacttatcatgcat
gcaatggcagagtggtacatgagaggggagcagtatgatcaggcaaaactgtcacgcatt
cttgacgtggcgcaagacttgaaggccttgtcaatgctgctcaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaagcttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatcacagcctgtatgactttttta
aagaggcgatgcccatctatcctgggtggccttgccccagaaaaggaccagcccaaaagt
gctcagcttcctccagaaactctagcgactatgttggcttgcttacaagcttgtgccggg
agtgtttctcaggagctatcggagaccatcctcaccatggtagcaaactgcagtaatgtc
atgaacaaagctagacaaccaccacctggagtcatgcccaagggacgtccacctagtgct
agcagtttggatgctatttctcctgtacagattgacccgcttgctgggatggcatctctt
agtttaggtggttcagcannnnnnnnnnnnnnnnnnnnnnnnnnnnngcaaggcttccct
cctaacttgggctctgctttcagcacacctcagtcaccagcaaaagcatttcctcccctt
tccacccaaaaccagaccacaggttttagtggcattggaggactctcttcacagcttcca
gtaggtggtcttactacgggtagcctgactggtataggaactggggcccttggcctccct
gcagtgaacaacgatccattcgtgcaaaggaaactgagcacatctggactgaaccagcct
acattccagcagaccgatttatctcaggtgtggccagaggcaaatcagcactttagcaaa
gaaatagatgatgaggcaaatagctactttcagcgcatttataaccatccaccacaccca
accatgtctgtagatgaggtattagaaatgctacagagatttaaagactccaacattaaa
cgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggagtaccgatttttc
ccccagtacccagataaagagctgcacataacagcctgcctctttggtgggataatagag
aaaggactggttacttatatggcattgggccttgccctgcgctatgttcttgaagcctta
cgaaagccttttgcatccaaaatgtactattttggtattgctgcactagatagatttaaa
aatagattgaaggactatccccagtattgtcagcacttggcttctattagtcactttata
cagttccctcatcacctacaggagtacattgaatatggacagcaatccagagatcctcct
gtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggcccaagcc
caggcccaggttccagcaaaagctcctcttgctggtcaagtcagcactatagtaaccacc
tcaaccaccaccactgttgcaaaaaccattacaatcactcgaccaacgggagtcagcttc
aaaaaagatgttccgccttccattaatactaccaatattgataccttgctagttgcaaca
gatcaaacagagagaattgtggaacccccagaaaatgtccaggaaaagattgcattcatc
ttcaacaatctatctcaatcaaacatgacacagaaggttgaggagctgaaggaaactgtg
aaagaagagttcatgccttgggtttcacagtaccttgtgatgaaaagagtcagtatcgag
ccaaactttcacagcttatattcaaacttccttgatactcttaagaatccagaatttaat
aagatggttctgaatgaaacctatagaaatatcaaggtgctgctgacatctgataaggct
gcagccaacttctcagaccgttccctgttaaagaaccttggccactggttgggaatgatc
acattggctaaaaataaacccatcttgcacacagatttggatgtgaaatccttacttctg
gaagcctatgtcaagggacagcaggagctgctttatgtagtgccatttgttgccaaagtc
ttagaatccagtgtcaggagtgtggttttcagacctccaaacccttggacgatggcaatc
atgaatgtattagctgagctgcatcaagagcatgacttaaaactgaacctgaagtttgag
attgaggtgttgtgcaagaaccttgcattagacatcaatgagctgaaacctggaaacctc
ctgaaagataaggatcgattgaaaaatctggatgaacagttgtctgctccaaagaaagat
gtaaagcagccagaggaactaccacctatcacaacaaccactgcttcaacaactccagct
accagcaccacttgtacagccactgttcctccacaacctcagtacagctaccatgatatc
aatgtctactcactgggagggctggctccacatattactctaaatccagctattccactg
tttcaggctcacccgcagttaaagcagtgtgtgcgtcaggctatagagcgagccgtgcag
gagcttgtccacccagttgtagatcggtccattaagattgccatgactacttgtgaacag
atagtcaggaaagattttgcactggattcagaggagtcacgcatgcgtgtagcagcacac
cacatgatgcggaacctgactgctggaatggccatgattacctgcagggaacctttgctg
atgagcatagctaccaacttgaagaacagttttgctactgccctgagggcagcatcccca
cagcagagggagatgatggagcaggcagctgcacagttagctcaggagaactgtgagtta
gcatgctgcttcattcagaagacagctgtggaaaaggcaggccctgaaatggacaagagg
ctggcaactgaatttgagctcagaaagcatgccagacaagagggtcggcgttactgtgat
ccagttgtgttaacttaccaggctgaacggatgccagagcagataagactgaaggttggt
ggtgtggacccaaaacaactagctgtttatgaagagtttgcccgcaatgtccccggcttc
ttacctaccaatgacttaactcagcccacaggatttttggctcagcctatgaagcaggcc
tgggctactgatgatgtagcacagatctacgataaatgtatgacagaactggaacagcat
ctgcaatctattccacataccctgaccatgaacccacaaactcaagccttacgcagcctc
ttggaggctgtagtggtggctcgtaactcccgtgatgctattgctgctcttggactgcta
cagaaggctgttgagggcttattggatgccaccagtggtgctgatgctgacctactgctc
cgctaccgtgaatgtcatctgcttgtactgaaagctttgcaggatggccgtgcctatggg
tccccgtggtgtaataaacagattaccagatgcctgattgaatgccgggatgagtataaa
tacaatgtagaagctgtagagctgctaatccgcaatcacctagttaacatgcagcagtat
gaccttcatttagcacagtcgatggagaatggcttgaactacatggcagtggcatttgcc
atgcaactggtgaagatcctgttggtggatgagaggagtgtagctcatgtaaccgaggca
gatttgttccacacaattgagacgctgatgaggattaatgcccactccagaggaaatgcc
ccagaaggattaccccagttgatggaagtggttcgatccaactatgaagcaatgattgac
cgtgcccatggagggcctaattttatgatgcattctggaatttcccaagcctctgagtat
gatgatccaccaggcctgagggagaaggcggagtatctactgagggaatgggtgaatctc
taccattcagctgcagctggccgtgacagtaccaaagctttctctgcgtttgttggacag
atgcaccagcaaggaatcctgaaaacggatgacctgatcactcgcttctttcgcctttgc
actgaaatgtgtgttgaaatcagctaccgtgctcaagctgagcagcagcacaatcctgct
gccaaccccaccatgatcagagccaagtgctaccacaacctggatgcctttgtgcggctt
attgcactgctggtgaagcactctggggaggctaccaacacagtcacaaagatcaacctg
ttgaataaggttcttggtatagtggtgggagttctccttcaggaccatgaagttcgccag
agtgagtttcagcagcttccttaccaccgcattttcattatgttgctgttagaattaaat
gctcctgagcatgtactggagactatcaactttcagaccctcacagctttttgtaacaca
tttcatatcctgaggcctacaaaagctccaggttttgtttatgcctggctggaactgatc
tctcatcggatatttattgcaagaatgctggcacatacaccacagcagaagggttggcct
atgtacgcccagttgttgattgatctcttcaagtacttggctccttttcttagaaatgtg
gaactcaccaaacctatgcaaattctctacaagggcactctgcgtgtattgctggtccta
ctgcatgatttcccagaattcctttgtgattaccactatgggttctgtgatgtgatccca
cccaactgtatccagctgaggaatctgattttgagtgccttcccacgtaacatgagactt
ccagatcctttcactcctaaccttaaggtggacatgttaagtgagattaatattgctccg
cggatactcactaacttcactggagtgatgccacctcagttcaaaaaagacttggattcg
tatctcaaaactcgctctcccgtcactttcctgtccgatttgcgcagcaacctacaggta
tcaaatgaacctggcaatcgctacaacatccagctaattaatgcactggtgctctatgta
ggtactcaggctattgcacacattcacaacaaaggcagcacaccctctatgagcaccatc
acccattcagcccatatggacatcttccagaatctggctgtggaccttgatactgaaggt
cggtatcttttcttgaatgcaattgccaatcagctgcggtaccccaacagtcacacgcac
tacttcagttgcaccatgctttacctatttgcagaggccaacaccgaggctatccaggaa
cagattacgagggttcttttggaacgactgattgtaaataggcctcacccatggggtctc
ctcattaccttcattgagctgataaaaaacccggcatttaagttctggaaccatgaattt
gtccattgtgctccagaaattgagaagttgttccagtcagttgcacagtgctgtatgggg
cagaagcaggcacagcaagtgatggaagggactggtgccagttag
DBGET
integrated database retrieval system
