Alteromonas stellipolaris LMG 21861: AVL57_01075
Help
Entry
AVL57_01075 CDS
T04545
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
asq
Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_01075
Enzymes [BR:
asq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVL57_01075
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AVL57_01075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AMJ76765
UniProt:
A0ABM5YPY4
LinkDB
All DBs
Position
pASTE61-200:complement(221504..224824)
Genome browser
AA seq
1106 aa
AA seq
DB search
MQDTNIRKTLSELTTHKLVAAPAGSGKTTESIKYFLNCLLHSLEPENVLSITFINKATAE
LRQRLVNELKRAKLNQVPNSPHEMQMFELAKKVLKRSEERGWGILENPNRLEIKTFDSLC
KSIAAMAPASSCFGKITAISERPNDLYRAAAESLLGQYKENSDLGEDIRKLLMHFDNKFP
KAVNMLAEMLSYREQWLSLVMDRDVVEQREVMENNNAQVIAKCAAPLFDTLNSVMDELKD
IVAYAKGTECNVHQLDSDALTDEQTFKFLTSFKEVFFTKQGKVKSKLTKREGFGPLKDIK
DEDAKAHATMMREQASCLLEHFRDLDEDIVGILDSVVPPNYSNKEWDLLSSILTLLPILA
AKLLLQFNKHKECDFAEIQNAALRALGEEGKPSDTMLRLDNRISHILVDEVQDCSPFQFE
LLKRLSSGWQIDDGKTLYLVGDKMQSIYLFRGADVGNFIQASDNGVGHLNLETHQLTSNY
RSQAGIIEWVNSKFSSAFGSKTDASLGSTTYNPSEAAKPALDNEAVSITRYEGPNWLARQ
ASDIVNQIHKIQSAEKNASIAVLGRSRADLATIIEHLRKGEVGHRAIDIHPLASLSVITD
LTLLTKSICDLSDKVSWIGLLRSPLMGLSLTELETIAQEGGTKRARYKDIMIAKLKSEKT
LSKLSQGTVERIKRLTKVIDQSIRHAERKSLASIIEGAFVVLGGLSVLKDANEKNAYKAF
LELLGKFSFEQFDGDKLSDSIESLFAPDEKSSGMINLMTMHKSKGLEFDYVFIPNSHKPI
RPEVTKLVDFVQTSIKGERIAVFAPNKSSSLTETRMNKCIQAIKSMKARNEAIRLAYVGS
TRAKKQLFILGESKTAYPESSLLGMLKVNDSEAVKVLTSEVTEQEVDTLPKRTRLTKLNN
LHLPEGQMLASSRGIIHVDNEAPPKFDWMVDTHRIIGIVFHATIEKIADKGWDAFFAQPA
ETNRAYWRVLLLKHGIADSSLFYAIRELEEQLQYLKSSDYMAWALQQSNIEVEKPIYTKR
LGKLKKLIIDITFETDNARYIIDAKTSRPSHGETEQAFAHRMMARYAEKMESYKNLFPDN
ETIKVCLYLSSIGKIATYDFKEDVAV
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacgaatatacgtaaaacactatcagaactcacaacacataaattggtagct
gcccctgctggctcaggtaagacaactgagtcgattaaatatttccttaactgtctattg
catagcctagagccggaaaacgtactttcaatcaccttcatcaataaagcgactgctgag
ttgaggcagcgactagtaaatgagcttaagcgtgctaagttaaatcaggtacctaatagc
cctcatgaaatgcaaatgtttgaacttgccaaaaaggtgttgaagcgttcagaagaaaga
ggctgggggattttagaaaatcccaatcgtttggaaattaaaacctttgattccctctgc
aaaagtattgctgctatggcccctgcatcaagttgttttggaaaaatcacggcgatatct
gaaagaccaaacgacctttacagagcagccgcagagtctttattggggcaatacaaagaa
aactctgatttgggcgaagacatcagaaagctgcttatgcattttgataacaaatttcca
aaggcggtcaacatgctggccgaaatgctgtcttaccgcgagcaatggctatcattggtt
atggacagggacgtcgtagagcagcgtgaagttatggaaaataacaacgcacaagttatc
gctaaatgcgctgcacctttgttcgatacactcaatagtgtcatggatgagctaaaagac
attgtggcgtatgcaaagggcacagaatgtaacgtccaccagctagattcagatgcctta
acagatgagcaaacctttaaatttcttacctcgtttaaagaagttttctttactaagcaa
ggcaaagttaaatctaaattaactaagcgagaagggttcggtccacttaaagacattaaa
gatgaagatgcaaaagcgcatgcaaccatgatgcgtgagcaagccagctgcttactagag
cactttcgcgacctagatgaagacatcgtaggtattttagatagtgttgtaccaccaaat
tactccaacaaagaatgggatcttctatcaagtatcttaacccttctaccaatacttgct
gccaagttattgcttcagtttaataagcataaagaatgcgactttgcagagattcaaaac
gcggcattacgcgcactaggggaagaaggtaaaccgagtgatacgatgctacgacttgat
aaccgcatttcccatatattagtagatgaagtgcaagactgttcgccttttcaatttgag
cttttaaagcgtctgagtagcgggtggcaaatagatgatggtaaaacgttgtatctggtt
ggcgataagatgcagtcgatttatttatttcgaggtgccgatgttggaaactttattcaa
gcgtctgataatggcgtaggacacttaaacttagagacacaccaactaacgagtaactat
cgctctcaagctgggattatcgaatgggtgaatagtaagttttcaagtgcatttggcagc
aaaacagatgcttcacttggttcaaccacttataacccttctgaggcggcaaaacctgcc
ttagataatgaggccgtatccatcacacgatacgaaggtccaaattggttagcaagacaa
gcttctgacattgtgaatcaaattcacaaaatacaaagcgcagaaaagaacgcatctatc
gcagtattaggccgttcacgcgctgacttagcaaccatcatcgagcatttgcgcaaaggg
gaggtaggtcatagagcgattgatattcaccccctcgcttcattgtctgttattacggat
ttaactctactgacgaaatcaatctgtgaccttagcgataaggttagctggatagggtta
ttacgctctccgcttatggggctatcactaactgaactagaaaccattgcacaggaaggt
ggaacaaagcgagcccgatataaagatattatgattgcgaaactaaagtcggaaaagacg
ctaagtaaattaagccaaggcacggtcgagcgtatcaagcgccttactaaggttattgac
caatcaattcgccacgcagagcgtaaatctttagcctcaatcatcgagggggcgtttgtg
gtcttaggcggcttatcagtgttgaaagatgcgaatgagaaaaatgcatacaaagcgttc
ttagaattgttgggtaaattcagttttgaacagttcgatggcgataaactgtcagactcc
attgagagtttattcgcaccggatgaaaagtcgtctggaatgattaaccttatgaccatg
cataaatctaagggtttagagtttgattacgtgttcattccaaatagccacaaaccaatt
aggccagaagtaaccaagttggtcgattttgtgcaaacctccattaaaggtgagcgcatt
gcggtatttgcaccaaataaatcgtcaagcttgaccgaaactcgtatgaataaatgtatc
caagccattaagtcaatgaaagctcgcaacgaagctatcagactggcttacgtaggttct
actcgggctaagaaacaactcttcattcttggcgagtcaaagactgcttatcctgaaagt
agcttactgggcatgttaaaagttaatgatagtgaagccgttaaggttctgacaagcgag
gttactgaacaagaggttgatacgttaccaaagcgaacgcgactcactaaattgaataac
ttgcaccttccagaaggccaaatgttagcgtcatcgcgcggtatcatacatgtggataat
gaagcccctcctaaatttgactggatggttgatacacacagaattataggaatagttttt
cacgccactattgaaaaaattgccgataagggatgggatgcattcttcgctcaaccggct
gaaactaaccgagcgtattggcgagtattgctattaaaacatgggatagctgatagctct
ttattttatgcaataagagaattggaagagcagctgcaataccttaagtccagcgactac
atggcatgggcgttacagcaaagtaatatcgaagttgaaaagccgatatatacgaagcgg
ctaggcaagcttaaaaagttaataatcgatataacatttgagactgacaatgctcgctat
attattgacgcgaaaacgagtaggccttctcatggggaaactgagcaagcattcgcgcat
cgaatgatggcccgttatgccgagaaaatggaatcatacaaaaacttatttccggataac
gagacaattaaagtttgcctatatctatcgtccattgggaaaatagcgacatatgatttc
aaagaggatgtcgctgtatga
DBGET
integrated database retrieval system
