KEGG   Aeromonas schubertii: WL1483_940
Entry
WL1483_940        CDS       T04186                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
asr  Aeromonas schubertii
Pathway
asr02024  Quorum sensing
asr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WL1483_940 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    WL1483_940 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asr03019]
    WL1483_940 (hfq)
   03036 Chromosome and associated proteins [BR:asr03036]
    WL1483_940 (hfq)
Messenger RNA biogenesis [BR:asr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     WL1483_940 (hfq)
Chromosome and associated proteins [BR:asr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    WL1483_940 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ALP40359
UniProt: A0A0S2SF95
LinkDB
Position
complement(3867941..3868177)
AA seq 78 aa
MNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPARAVNHH
QHAAQGGQSDEQQGESEA
NT seq 237 nt   +upstreamnt  +downstreamnt
ttgaatgcgctgcgccgtgagcgtattccggtttctatctatttggtgaacggcatcaaa
ctgcaaggtcaaatcgagtccttcgaccagttcgttatcctgctcaagaacaccgtcagc
cagatggtctacaagcatgccatctccaccgtggtgccggctcgcgccgttaaccatcat
cagcatgctgcccagggcggtcagtccgacgagcagcagggtgagagtgaagcctga

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