Aeromonas schubertii: WL1483_940
Help
Entry
WL1483_940 CDS
T04186
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
asr
Aeromonas schubertii
Pathway
asr02024
Quorum sensing
asr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WL1483_940 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WL1483_940 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asr03019
]
WL1483_940 (hfq)
03036 Chromosome and associated proteins [BR:
asr03036
]
WL1483_940 (hfq)
Messenger RNA biogenesis [BR:
asr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WL1483_940 (hfq)
Chromosome and associated proteins [BR:
asr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
WL1483_940 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ALP40359
UniProt:
A0A0S2SF95
LinkDB
All DBs
Position
complement(3867941..3868177)
Genome browser
AA seq
78 aa
AA seq
DB search
MNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPARAVNHH
QHAAQGGQSDEQQGESEA
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgcgctgcgccgtgagcgtattccggtttctatctatttggtgaacggcatcaaa
ctgcaaggtcaaatcgagtccttcgaccagttcgttatcctgctcaagaacaccgtcagc
cagatggtctacaagcatgccatctccaccgtggtgccggctcgcgccgttaaccatcat
cagcatgctgcccagggcggtcagtccgacgagcagcagggtgagagtgaagcctga
DBGET
integrated database retrieval system