Archaeoglobus sulfaticallidus: Asulf_01230
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Entry
Asulf_01230 CDS
T02642
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ast
Archaeoglobus sulfaticallidus
Pathway
ast03410
Base excision repair
ast03430
Mismatch repair
ast03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Asulf_01230
03430 Mismatch repair
Asulf_01230
03440 Homologous recombination
Asulf_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ast03400
]
Asulf_01230
DNA repair and recombination proteins [BR:
ast03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Asulf_01230
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Asulf_01230
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Asulf_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Late_protein_L1
Motif
Other DBs
NCBI-ProteinID:
AGK61226
UniProt:
N0BL13
LinkDB
All DBs
Position
complement(1122742..1124046)
Genome browser
AA seq
434 aa
AA seq
DB search
MLDILKAEARKAVNLIEKYEFVRIFTHYDVDGITAGSIMAKSLLRFNKKFHLSFLNGLNN
GINYEKDDLVILLDMGSGYPDIVSSIEADFIVIDHHFPLGKIDAQSSFVHVNPHLAGIDG
SFELSASGTAYVVANQIADNKDLSGLALAGIIGDKQKIKGGNAEIVREGIQSGYIEEVKG
LSLYSGKLREVLSISIEPFLDFYKKEDELEEFLEKVRIDGDREVDELDEEEVRRLANAIV
LRVLENGGSEEVLNDFIGRKFMLKAELIKNATMMSDIINSCGRVSAFSIGFGICMRDSKF
LDKGYEIWRKFLTELLDEIVKRKEEVKEGECMRYLVMDNAPTTGPIATVLSRYIFSDRPF
IAVNIKRDVAKVSSRTTMRMSEIVDLGEIMNKAAKAVGGRGGGHRVAAGANIPPDRVEDF
IKEVDRLCCSAMGK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacatactgaaagctgaagccagaaaagccgtcaatctgatcgaaaaatacgag
ttcgtaaggatattcacgcactacgatgttgatggaattactgctggcagcataatggca
aagtctttgctcaggttcaacaagaagtttcatctaagctttctcaatggattgaacaac
ggcataaactatgagaaagatgatcttgttattctgctcgatatgggtagtggctatccg
gacatagtatccagtatagaggccgatttcattgtgatcgatcaccatttcccgcttgga
aaaatcgatgctcaatccagctttgttcatgtcaatccacatctggcaggaatagatgga
tcctttgagctttcagccagtgggacggcttatgttgtagcaaatcagattgcggataat
aaggatctgtctggcttggctctcgcaggaatcatcggtgataagcagaaaataaagggt
ggaaatgcggaaatagttagggagggaattcagagcggatacatcgaggaggttaagggc
ctatcgctgtattctggaaaattgagggaagttctttcgatttccatcgagccttttctg
gatttctacaagaaggaagacgagcttgaggaatttctggagaaggtcaggattgatggg
gatagggaagtggatgagcttgatgaggaagaggtaagaaggcttgcaaatgctatcgtc
ctgagggtgctggagaatggtggaagcgaggaggtactaaacgacttcataggcagaaaa
ttcatgctcaaagcagagttaataaaaaacgctacaatgatgagcgatatcataaactcc
tgtggaagggtttcggcgttcagcataggctttggaatatgtatgcgggatagcaagttc
cttgacaagggttatgaaatctggaggaaattcttaactgagcttctggatgagattgtc
aaaaggaaagaggaggttaaggaaggagagtgtatgaggtatctcgtgatggacaacgca
cccaccacagggccgatagccacggtgctttccagatatatcttcagcgataggccgttt
atagcggttaacataaagagggatgttgcaaaggtatcatccagaacgacgatgagaatg
agcgagatagtagatttaggagagataatgaataaggctgcaaaagctgttggaggaaga
ggtggaggtcacagagttgctgccggagccaacatacctcccgacagggttgaggacttc
ataaaggaggttgacaggttatgctgttctgcgatggggaagtga
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