Antennarius striatus (striated frogfish): 137593456
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Entry
137593456 CDS
T10427
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137593456 (cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137593456 (cnot1)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137593456 (cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137593456 (cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
137593456
NCBI-ProteinID:
XP_068168257
LinkDB
All DBs
Position
4:3053853..3080554
Genome browser
AA seq
2390 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDNPLHYQKSLKPSTHLFTQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGACGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGELAKTMMESSLAEFMQEVGYGFCASLDECRNIILQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDSSQAHTWNVEVLIDIVKEVNPNLNFKEVTYE
LDHPGFAIRDSKGLHIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLISPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFGFPIKHC
PDMLVLALLQISTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLAGMGSL
NLGGTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSGLGMQTVNTDPFGSRKMSTPGLNPPTFQQTDLSQVWPEANQHFSKE
IDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFP
QYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYFFGIAALDRFKN
RLKDYPQYCQHLASIAHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAHV
QAQAQSQQPGVPKAPQPGQPSTLVTTTTTTTTAAKTTTITRPTPSSFKKDVPPSINTTNI
DTLLVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKDEFMPWVSQYLV
MKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNL
GHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRPQ
NPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINDLKPGNLLKDKEKLKNLDEQ
LSAPKKEAKPPEDLLPVSTTGDFVAFAAPPSTPAATTTTCTTTGPPTPQFSYHDINVYAL
AGLAPHININVNISLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCEQIIRKD
FALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIANNLKNSFSAALRAPTPQQREM
MEEAVARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLT
YQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQQAWATD
DVAQIYEKCMADLEQHLHAIPPALAMNPLTQALRSLLEAVALARNSRDGIAALGLLQKAV
EGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDEYKYNVE
AVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVTEADLFH
TIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPP
GLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMC
VEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKV
LGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHIL
RPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNK
PMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPF
TPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEP
GNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLF
LNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITF
IELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctttcgctggctttgtctcaaatcagctatctggtggacaattta
acaaaaaaaaattacagagccagccagcaagaaatacagcatattgtaaatcgtcacggt
cctgaagcagacagacatcttttacgctgtctcttctcccatgtggatttcagtggcgat
ggtaaaagcagtggcaaggactttcaccagacacagtttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaattttatctctactctgtgttatgccattgacaatcccctccac
taccaaaagagtttaaaaccatcgactcacttatttactcaactgagtaaagttctgaaa
ctcagcaaggtccaagaggtgatatttggcctcgcattgctcaactcgagcaacacagac
cttcgtgggtttgctgcacagttcatcaagcagaagcttccagacctcctgcggtcttac
gttgacgcagacctaggaggaaaccaggaaggtggctttcaggacattgccatagaggtg
ttgcacctactgctctcccatctactttttggccagaagggagcctgtggggtcgggcag
gaacaaattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgctcgcaccactgctgtaccctgaaaaacgggacattctcatggacaggatcctg
ccagactcgggggagttagctaagaccatgatggagagttctcttgcagaattcatgcaa
gaggttggctatggcttctgtgctagtctggacgagtgcagaaacatcatccttcagtat
ggggtgagagaggtgacggccagccaggttgccagggtccttggtatgatggcccgaacc
cactctggtctaaccgatggtattccactacagtccatctctgctccgggcagtggcatc
tggagcgatggcaaggataagaacgacagttcgcaggcacacacatggaatgttgaggtg
ctcattgacattgtgaaggaagtgaatcccaacctaaacttcaaagaggtgacctatgag
ctggaccatccaggctttgctatccgggacagtaaagggctgcatatcgttgtgtatggc
attcagaggggcctgggcatggaggtgttccccgtggacctcatctatcggccatggaaa
catgctgagggacagctgtcgttcattcagcactccctgatcagccctgaggtgttttgc
tttgccgactacccctgccacactgtagccatcgacatcctgaaggccccaccagaggac
gacaacagggagatcgccacctggaagagcttggacttggtggagagcctgcttcggctg
tctgaggtgggccagtacgagcaggtgaagcagctgtttgggttccccatcaagcactgc
ccggacatgttggtgctggcgctgctgcagatctccacctcctggcacacactccgccac
gagctcatatctaccctaatgcccatctttctgggcaaccatcccaactctgccatcatt
ctgcactacgcctggcacggacagggtcagtctccctccatccgtcagctaattatgcat
tcaatggctgagtggtacatgaggggggagcagtacgatcaggccaagttgtctcgcata
ctagatgtggcccaggacctaaagtccctgtctatgttgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcatctcgacgtgaatacctcaaactggacaaatgg
ctgactgacaaaatcagagagcatggggaacctttcatccaggcgtgtgtgacattcttg
aagaggcgctgtccttccattatggggggtctggccccagacaaggaccaacccaaaagt
gctcagctgcctccggagaccttagccaccatgctggcctgcctgcagtcctgtgctggg
agtgtttcccaggagctgtcagagacaatcctgactatggttgccaattgtagcaatgtc
atgaataaagcgcggcagccgcctccgggggtaatgccaaaggggcgcgcccccagcacc
agcagcctggatgccatctcacctgttcagatggaccctctggctggcatgggttcttta
aacttgggggggacagccacctcccacactcaaagcatgcagggtttcccaacctcactg
agctcagcgttcagtaacccccagtccccagccaaagctttcccaccactgtccaacccc
aaccccagcacaccgtttgggggcattggcagcctgtcgtcgcagctccccggtatggac
tctggtcccctgggttcaggaatcggctctggtattggctccggtttggggatgcaaaca
gtcaacaccgacccctttggcagccggaagatgagcacaccaggcctcaacccgccgacc
tttcagcagactgatctttctcaggtgtggcccgaagcaaaccagcactttagtaaggag
atcgatgacgaagcaaacagttatttccagcgcatctacaaccacccacctcacccaacg
atgtctgttgatgaagtactggagatgctgcagaggttcaaggattcaaccatcaagcgg
gagcgggaggtgttcaattgcatgcttcggaacttgtttgaggagtaccgattcttcccc
cagtacccggacaaggagctgcacatcactgcctgcctttttggtggaataatcgagaag
ggtcttgtcacgtacatggctctgggcttggccctccgatatgtccttgaagccttaaga
aaaccctacggatccaaaatgtatttctttggaattgctgctttggataggtttaaaaac
agactcaaggactatcctcagtattgtcaacacctggcttcaattgcacactttttgcaa
ttcccccaccatttacaagagtgtgtgcagtatatcgagtatggccaacagtcacgggac
cctccggtgaagatgcaaggctccatcaccacacctggcagcctggctctcgctcacgtc
caagcccaagcacagtcgcagcagcctggtgtccccaaagccccccagccaggtcaaccc
agcactctagtcaccacaaccaccacgaccaccacggcagcaaagacgaccaccatcaca
agacccacccccagcagcttcaagaaggatgttcctccctccataaacacaaccaacatc
gacaccctgctggtggccactgaccaaacagaaaggatcgtcgagcctccagaaaatgta
caggagaagattgcttttatcttcaacaacctttctcagtccaatatgacacagaaggtg
gaggagctgaaggagaccgtcaaggatgagtttatgccctgggtgtctcagtacttggtg
atgaagcgcgtcagcattgagcccaatttccacagcctctattctaacttcctggatact
ctgaagaaccctgaatttgttaagatggtcctcactgaaacttacaggaatatcaaggtt
ctgttgacctctgacaaggcagctgccaacttctccgatcgctctttgctaaaaaacctg
ggccactggttgggcatgatcacactggctaaaaacaagcctatcctttacactgattta
gaagtcaaatctctgctactggaggcctatgtgaaaggccagcaggagcttctctatgtg
gttccttttgtggccaaagttttggagtccagtctccgtagcatggttttcaggccacag
aacccctggaccatggccattatgaatgttcttgcagagctacatcaggaacatgatctc
aagctgaacctcaagtttgagattgaagttctttgtaagaacttgtctctggacatcaat
gatctgaagccaggaaacctactgaaggacaaggagaagctcaagaacctggatgagcag
ctctctgcaccaaagaaagaggcaaagcccccagaagacctgctgccagtttctaccaca
ggagactttgtcgcatttgcagctcctccctcaacaccagcggctaccaccaccacctgt
acaactactgggccccccaccccgcagttcagttaccatgacatcaatgtgtatgctttg
gcaggcctagcgccacacatcaatataaatgtcaatatctccctgctgcaggcccacccg
cagctgaagcagtgtgtacggcagtcagtggagcgagccgtccaggagctggtgcatcct
gtggttgatcgctctatcaaaattgccatgacaacctgtgagcaaatcatcaggaaggac
ttcgccctggattcagaggagtctcgcatgcgtgtggcagctcaccatatgatgagaaac
ctgaccgcaggcatggccatgatcacctgccgtgagccactgctcatgagcatcgctaac
aacctgaagaacagcttttctgctgcgctgagggcaccaaccccccaacagagggaaatg
atggaagaagctgtggccagaattgctcaagacaactgtgagttggcttgctgcttcatt
cagaaaactgctgtggagaaagctggccctgaaatggacaagagactggccacggagttt
gagctgaggaaacacgcacgtcaggaggggcggcgctactgtgatccggtcgttctgacc
tatcaggctgaacgcatgcctgagcagatcagactgaaggtgggaggagtcgaccccaag
cagctggcggtctatgaggagtttgccaggaacgtcccaggtttcctccccagtaatgat
ctctcccagcccaccggcttcttggcccagcccatgaagcagcaggcgtgggccacagat
gatgtggctcagatctatgagaagtgcatggcagacttggagcagcaccttcatgccatc
ccccccgccctcgccatgaaccccctgacccaggccctgcgcagcctgctggaagctgtt
gctttggccagaaactccagggacggcattgcagcgcttggccttctgcaaaaggctgtg
gaaggcctcctggatgctactagcggcgctgatgcagacttgctgctgcgctacagagag
tgtcacctgctggtccttaaagccttgcaggatggacgtgcctacggaccgcagtggtgc
aataagcagatcaccaggtgtctcatagaatgtcgtgatgagtacaaatacaacgtggaa
gcagtggagctgctgatcaggaaccatttggtcaacatgcagcagtacgaccttcacctg
gcgcagtccatggagaacggacttcactacatggcggtggcgttcgccatgcagctggtg
aagctgctgctggtggacgagcgcagcgtgagccacgtcacagaggccgacctcttccac
accatcgagactttaatgaggacctgtgcacactccagagccaacgcacccgaggggctt
ccgcagctcatggatgtggttcgctccaactatgaggccatgattgaccgagcgcacggc
ggacccaacttcatgatgcactccggcatttctcaggcctcagagtatgatgacccccca
ggcttgagggagaaggcagagtacctcctccgggagtgggtcaacctgtatcactcagcc
gctgcaggcagggatagcaccaaagcgttctctgcctttgttggacagatgcaccagcag
ggcatcctgaagacagacgacctgatcacaaggttcttccggctgtgcacggagatgtgt
gtggagatcagctatcgagctcaggctgagcagcagcacaacccggcagccagcgcagcc
atcatcagagccaagtgttaccacaacctggacgccttcgtgaggctcatagcgctgctg
gtcaaacactccggagaggccaccaacacggtgacaaagatcaacctcctcaacaaggtg
ctgggtatcgtcgttggggtgttgattcaggaccacgatgttcgtcagacagaattccag
cagctgccgtaccatcgcatcttcatcatgctcctgttggagctcaacgcccccgaacac
gtcctggagaccatcaacttccagacactcactgccttctgcaacaccttccacatcctc
agaccgaccaaagcgcctggctttgtgtacgcctggctggaactcatctcccatcgcatc
ttcatcgccagaatgctagcacacaccccccagcagaagggttggcccatgtacgcacag
ctgctgatcgatctgttcaagtacctggcgccattcctgaggaatgtagagctgaacaaa
cctatgcaaatcctctataagggcacactaagagttctcctggtcctgctgcacgacttc
ccagagttcctgtgtgactaccattatggcttctgtgacgttatcccacccaactgcatc
cagctccgcaacctcatcctcagtgccttcccacgcaacatgaggctccctgatccgttc
acacccaatctgaaggtggacatgctgagtgagatcaacatcgctccccgtatcctcaca
aacttcaccggcgtcatgccctcgcagttcaagaaggatttggattcgtacctgaaaacc
cgttcacctgtgacgttcttgtctgagctgcgcagcaacctgcaggtgtctaatgaacca
ggaaatcgctacaacatccagctgatcaacgccctagtgttgtacgtaggcacgcaggcg
atcgctcacatccacaacaagggcagcacgccctccatgagcaccatcacccactctgcc
cacatggacatcttccagaacctggctgtggacctggacaccgaggggcgttacctgttc
ttgaatgcaatcgccaatcagctgcgctaccccaacagccacacccactacttcagctgc
accatgctgtatctgtttgctgaggccaacaccgaggccatccaggagcagatcaccagg
gttctgttggagaggctcatcgtgaacaggccacacccctggggtctcctcatcaccttc
atcgagctgatcaagaatcctgccttcaagttctggagccatgactttgtgcactgtgcc
cccgagatcgaaaagctgttccagtcggtggcccagtgctgcatgggacagaagcaggcc
cagcaggtcatggagggcaccggtgccagctag
DBGET
integrated database retrieval system
