Antennarius striatus (striated frogfish): 137593505
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Entry
137593505 CDS
T10427
Symbol
spg11
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astr03400
]
137593505 (spg11)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
137593505 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
137593505
NCBI-ProteinID:
XP_068168363
LinkDB
All DBs
Position
4:complement(21738315..21754035)
Genome browser
AA seq
2369 aa
AA seq
DB search
MLEARRTDRSSMAVCVIPENQHCPELAGIRKAQLSPGVSLLGCLNPGGRLVLWDPADRDA
PPAAVDGTYSDFCWEKAASTGGGVRLMAVGAQWDLKLLAVEAQRSTSISVVCVAEYPADL
LLQNITEQNQGVFDLQSLGVLTFAAGRCCLLVNCDWLLQLQWQQMEAELQTTSCCRIFVT
DDREATVHHCVCRETLFSLSASGLISVSSVSDGCLLARIDLPAYLLSGLVDDDLVSTATS
FCLLQVSDDLCTAVAVTQSQAAVAIDLCHYFRIYPEHLLCAVPLQAPLRPQHRTDQDSLQ
SSSCCLSGLSSTFSPDRSWEARLASMYSRVQQTTAPPSSSLSLSSLPARTSWSSFLPHLE
SHQTPSLAHSRVPHGGVSISFSVPESSTPSLLTVSEFSAQVTFVTPGNQQATVALWDLES
GSVIYHHAEGGAAPVELCGGRQHRLLLKRNGVSQVLFSVSQQDLLSRLMLFGNTATVDAV
CHLNSWGRCSIPVHALQAGLKNRQLDTVDFYLKSKDNVLNPPADQPRAAAPSLTDSVQEL
RPALDLLCSAVKDSNSEPQSRHFSEQLLNITMSFIQTQIRLILTHTQHEDLQSCVDILYS
YVTELRSYMKRLSCPAGGDGSITRSEPEQEVECWEGLQMEEVVRQSILTNQIPRAQATLR
RRGCPGWRLSALRMEGLRQVYSCLQQRDLQTANTLLTNMGFCVSEQLHSICLYTDDRRLR
DFLVEELSGRGCFPEEEMLSVTFIRQMEELGSLPASRCPANTLPQRVLQMVCRSPVCGGE
EDLGELLGQQRCKEEVLWSNLQLDWVRNWSQSCRTAILLSRLQQTEVTSCDPAVLWYYLT
ALHDQHRLRDWIDWRKETRGPLQWPEITPELVNNNTICSSYLRENILDLLARKGVFIPDE
VSDFEQFLWRLSQGGGVMSLSSPVLQYRSPNGLDLHSCFISFCVERGLQYLLYTYLEHYR
LTPRNCPLLTNQSLSESQPWLQMLVKIQEITRDLSDPGLVFQASLTSAQVLLPDSQASLS
GLLLEGHSLLALAAIMFAPGGIDQVVGQSERSERTVDLQLLKMALAAYPKLRAALFPSGS
RGNGALSDVTLYHLMQSLHPLDPSHLFPWQTANPLNSSETAELPHFSSPHLVSRYALVEN
LDFLYYLRHGRPSFAYATFLVQMLSGCDDIPLVLQQGVQQVYRLALQLFNVPSVTSAAVC
FCELLGVCSLKLRVDVAALNAIMDHNTHTSTQQLHTLGVKLAEEEPGVADELIGCLEAAV
TDQLRQTNISRSSYQAAQVWALPVQFCQLHSLTFSSVYPSHCAHDGQFIHFLVFVQLHNF
PAQQVRSLAAQFGPSLQAHLSLAFQDLQVYSSGRNGGSEDQTLTTREAPGVPKQPMELFR
VLLQSQEQKSPYRYLLQEAVVQRCPTLAVISSCHQEAELVACLCVWVLTSVDDVVAAEAT
SHLVEAPQHHEWSLHDLSIIWRMLLGRGLVRPLLRGFELFQRDCPLALVLRMFELCCDYR
NFSEAKAKLLDFQRTLIALRNGSPGPPSELPLQWVESQASVLLLLLLQCCSSQYDLHRLL
QLLADVDKLLKSNGPDFRKLSQLSQLLQGSGVSLSPRLLQCASPSVQQEEFQAAVDALQE
RGCYSQARQVALLAGLSVQRLLLSQLQQEVNSQKSRSQWKRLETRVCFWRRCQDQLKAEG
TDPESAFQFFLSQTEPGTGASQSELTDVQEHCLLLCLTAHWLSLLSPVPVDQLEKLEKKL
WVGRIRQRVLTVSMEKESVFNLPPPTITPEMNTYESFMMELSNTSVLNTEEYLRVERVPA
PSEEQQELSPEETTVLTALIGCLLDDGSIHEASRVCRYFSLHHPDVWIALRCRGLASGDL
RPEAPEEAPETEGGTTMTHSASVSSLISYTMLPSPDDEVAIQLQKLVDQCRHGNKYCKQI
LSLYQLSKELQCSFGQICREEPSSVLEKLLLSELPERFRKAQAFIRAQGLSADSVAELVS
SAVVQTLLASTQELQPAEGQMFRVSEGRDSLVQLIKICEDPNLVGVKLLENLNTVPLRDL
DCIVELLIVAHDCFSLICNMEGIVRVLQVARHLSHTYLAPGEHYSLMVRLLIGIHRYNEM
TYIVDLLIQNHCFEILLRKKLVMERGQTSSLKAALLDYIKRCLPADSEKHNMVALCFSMR
REIGENHEMAARTQLKMIESQAWVVTPDLKSSLEMALALLKDAAESFSKDSCVRQASRCV
RMAKLVTLQLHFLNHGSELRIVNLRPAELLTVVISLPRVYQVFVVSEAYNYSPDWAEILY
QRVILKGDFVYLEELKRLRPLPSSLFEDIFKKLDGAPSSITSNAKRLLMYCDDVCSRYRL
AFQNNLYDVTKTLLQDAKTSSYLNDRLPR
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggcccggcggacggacaggagctccatggcggtctgcgtgatcccagagaac
cagcactgcccggagctagcgggcatccgcaaagctcagctgtcgcctggagtctccctg
ctcggatgtctgaaccccggagggaggttggtcctgtgggatcctgcggacagagacgct
cctccggcggctgtggacgggacttactcggatttttgctgggagaaggcagcgtccacc
gggggtggcgtcagactgatggccgttggagctcagtgggacctgaagctgctggcagtg
gaagcccaacggtcgacctccatttctgtggtgtgtgtggcggaatatccggcagatctc
ctgctgcagaatatcacggagcagaaccagggagtgtttgacctgcagtcgctgggtgtt
ttgacatttgctgctggccgctgctgtttgctggtgaactgtgattggctgctgcagctg
cagtggcagcagatggaggcagagctacagacgacatcctgctgcagaatctttgtgact
gatgacagagaggccactgtccatcactgcgtctgcagagagacgctgttcagcctcagc
gcctctggactcatatctgtgtcgagcgtctctgatggctgtctgctggcccgcatcgac
ctccctgcttacctcctctctggcctggtagatgacgacctggtctccacggcgacctcc
ttctgcctcctccaggtgtcagatgatctctgcacagctgtagcggtcacacagtctcaa
gccgctgtcgcaattgacctctgccactacttcaggatttatccagagcacctgctgtgt
gccgttcctcttcaggcccccctccgaccccaacaccgaacagaccaggacagcctgcag
agctccagctgttgcctcagcggcctcagctcgaccttcagtcctgaccgctcctgggaa
gctcgtctggcctccatgtacagcagagtacagcagacaacagctcccccctcctcctct
ttgtctttatcttctcttcctgctcggacatcctggtcttccttcctcccccacctggaa
tcccaccagactccatccttggcccacagcagagtacctcacggcggggtgtccatctcc
ttctctgtccccgagtcgtccactccatctctgctcactgtgtcagaattctctgctcaa
gtcacctttgtcacccccggaaaccaacaggccactgtggctttatgggatttggagtct
gggagtgtgatctaccaccatgcagagggtggagcagctccagttgagctttgtggaggg
agacaacacagactgctgttgaagaggaacggtgtgtcccaggtcctgttctcagtgtct
caacaggatttgctcagcaggctgatgctgtttggcaacacagcaacagtcgatgctgtt
tgtcacctgaatagctgggggcgctgttctatccccgtccacgcccttcaggctggactg
aagaaccgtcagttggacacggttgatttttacctgaagagtaaagataacgtcctgaat
ccgccagcggatcagccgagagctgcggcacccagcctcacagacagtgtccaagagttg
cgtcctgcattggacctgctctgttcagccgtcaaagattcaaacagtgaacctcagagc
cgacacttctcagaacagctgctcaacatcactatgagcttcatccagacccagatccga
ttaattctgacccacacccaacacgaagacctgcaaagctgtgtggacatcctgtacagc
tacgtcactgaactgaggagctacatgaagagactatcctgtcctgcagggggcgacggt
tccatcaccaggtctgagcctgagcaggaagtggaatgttgggagggactgcaaatggag
gaagtggtgcgtcagtccatcctgaccaatcagatccccagagcccaggccaccctgagg
aggcggggctgtccggggtggagactgtctgcactgaggatggagggtctacgtcaggtc
tactcctgcctgcaacagcgagatctgcagaccgccaacacactcctcaccaacatgggt
ttctgtgtgagcgagcagctccacagtatctgtctgtacaccgacgaccggcgcctcaga
gacttcctggtggaggagctgtcagggcgtggctgttttccagaggaggagatgctgagt
gtaactttcatcaggcagatggaggagttgggatccctgcctgcatcccgctgtcctgca
aacacgttgccacaaagggttcttcagatggtctgtaggtcgccagtttgtggaggagag
gaggatctgggggagttactgggtcagcagaggtgtaaggaggaggttctctggtcaaac
cttcaattggactgggtgaggaactggagccagagctgccggactgccatcctcttgtcc
agactccaacaaacagaggtgacttcctgcgacccagccgtgttgtggtattacctgact
gccctccatgaccagcaccggctcagagactggatcgactggagaaaggagacccgcgga
cccctccagtggccggagataactccagagctggtcaacaacaacaccatctgcagcagc
tacctgagggagaacatcctggacttgttggccaggaaaggtgtcttcatcccagacgag
gtgtcagattttgagcagtttttatggaggctgtctcagggtggaggggtgatgtctttg
tcttcacccgtccttcagtaccgttcccccaatggtctggatctccacagctgcttcatc
agcttctgtgtggagcgcggccttcagtacctgctctacacctacctggagcactacagg
ttgacaccaagaaattgtcccctgttgaccaatcagagcctgtctgagagccagccatgg
cttcagatgctggtgaagatccaggagatcaccagagatctctcagatccagggctggtc
ttccaggcaagtttaaccagtgctcaggtgctgctccctgacagccaggcgtctctcagc
ggtctcctgctggagggccacagtctgctggctctggctgccatcatgttcgcccccgga
ggaatcgaccaggtggtgggtcagagtgaaaggtcagagaggacagttgacctccagctc
ctgaagatggcgctggcggcttatccgaagctgagagccgctctgttcccctccgggtct
cgaggaaacggcgctctttctgatgtcaccttgtaccacctgatgcagtcgctgcaccct
ctggatccgtcccatctgttcccctggcagacggcaaacccactgaactccagcgaaaca
gcggagcttcctcatttctctagccctcacctggtcagcaggtatgccctggtggagaat
ctggacttcctgtattacctacgtcacggcagaccatcgtttgcttacgccaccttcctg
gtccagatgcttagtggctgcgacgacatcccactagtgctgcagcagggcgtccagcag
gtgtacaggttggctctgcagcttttcaacgtcccctcggtgacatcagcggcggtttgt
ttctgcgagctgctgggcgtctgcagcctgaagctgagggtcgacgtcgctgctctgaac
gccatcatggatcacaacacacacacctctacacaacaactacacactctgggggtgaag
ttggcagaggaggagcccggagtggcagacgagctgattggctgccttgaagctgcagta
acggaccaactgaggcagacgaacatcagcaggtcatcgtaccaggcggctcaggtgtgg
gcgttacccgtccagttctgtcagctccacagtctgaccttcagctctgtttacccctcc
cactgtgctcatgatgggcagttcatccacttcctggtgtttgtccagttgcataacttc
ccggcacagcaggtgaggtccttggcggcccagtttggccccagcctgcaggcccacctg
agtctggcgtttcaggacctgcaggtttacagttcggggaggaacggcggctctgaggac
cagactctgaccaccagggaggcccctggggtcccaaagcagcccatggaactcttccgg
gtgctcctgcagagccaagagcaaaagtcgccctacaggtatctgctgcaggaggcggtg
gtacagcgatgcccaacgctagccgtcatctcatcctgtcaccaggaggcggagctagtg
gcatgtctctgcgtgtgggtgttgacctcagttgatgatgtcgtcgctgcagaagctacc
tcccacctggttgaagccccccagcaccatgaatggtcattgcatgacctctcaatcatc
tggcggatgctgctggggcggggcctagtcaggcccctcctccgaggctttgagctcttc
cagagggactgtcctctggcgttggtgctgaggatgtttgagttgtgttgtgactacaga
aacttctccgaggccaaagctaagctgctggacttccaaaggacactcatcgccctgaga
aacgggagcccagggccccccagcgaactccccctacagtgggtggagagccaggcctcc
gtcctgctcctcttgttgctgcagtgctgctcctcccagtatgacctccaccggctgctg
cagctcttggcagacgttgataaactcctaaaatccaacgggccagacttcaggaagctg
agtcagctaagtcagttgctacaggggtcaggggtcagcctgtctcccaggctgctgcag
tgcgcttctccctccgtacagcaggaggagttccaggctgctgtggatgctctgcaggag
agggggtgctacagccaggcccgacaggtggcgctgctggctgggctgtccgtccagcgc
ctgctgctcagccagctccagcaggaagtaaactcccagaagtccagatcacaatggaaa
aggttggagactcgggtctgtttctggaggagatgtcaggatcagctgaaggcagaaggc
actgatccagaatcagccttccagttcttcctgtcccagactgaacctgggactggagcg
tctcagagcgagctgacggacgtccaggaacactgcctgctgctctgcctcacagcccat
tggctctctctcctcagcccagttcctgtggaccagttggagaagctggagaagaagctg
tgggtcggacggatccgacagcgcgtcctcaccgtttccatggagaaggagagcgttttc
aacctgccgcctcccaccatcacacctgaaatgaacacgtatgagtcattcatgatggaa
ctctccaacacgtcagtcctgaacactgaggagtatctccgtgtggagcgagtcccagct
ccctctgaggagcagcaggagctgagcccggaggagacgactgtcctgactgctttgatt
ggctgtttgttagatgatgggagtattcatgaagccagtcgcgtctgtcgctacttctcc
ctgcatcacccagatgtgtggattgcgttgcgctgccgaggcctggcttctggagacctg
cggcctgaagcgccggaggaagctccagagacggagggggggacgaccatgactcactcc
gcctccgtcagcagcctgatatcatacacgatgctcccctcgcctgacgacgaggtcgcc
atccaactccagaaactggtggaccagtgtcgccacggcaacaaatactgcaagcaaatc
ctcagtctctaccagctgtccaaggagctgcagtgttcctttggtcagatctgcagagag
gaacccagctcggttctggagaagctgctgctgtcggagctgccggagcgcttcaggaag
gctcaggccttcatcagagctcagggtctgtctgcagactctgtggccgagctggtctcc
tctgctgtggtccagacgctgctggcctccacccaggagctgcagcccgcagaggggcag
atgttcagggtgtcagagggtcgcgactctctggtccagctcatcaaaatatgtgaagat
ccaaacctggtgggagtcaaactgctagaaaacctcaacaccgttccactgagggacctg
gattgtattgtagagctgctcatcgtggctcacgactgcttcagtctcatctgtaacatg
gaggggattgtcagagtcctccaagtcgcacgtcacctgagccacacctacctcgcccca
ggagaacattacagcctaatggttcgtctgctgataggaatccacaggtacaacgagatg
acgtacatcgtcgacctgctgattcagaaccactgctttgagatccttctgaggaagaaa
ctggtcatggagagaggacagacctccagtctgaaggcggcgctgctggattacatcaag
cgttgcctgcctgcagacagcgagaaacacaacatggtggcgctgtgttttagcatgaga
cgggagatcggagaaaaccacgaaatggcggccagaacgcagctgaagatgatcgagtct
caggcctgggtagttactcctgatctgaagagctcactggaaatggcattggctctgctg
aaggacgctgcagagagcttctccaaggactcgtgtgtgcgtcaggctagtcgctgtgtt
cggatggctaagcttgttacccttcagcttcatttcctgaaccacggatcagagctgcgc
atcgtaaacctgcggcctgctgagctgctgactgtcgtcatctcactgccccgagtctat
caggtatttgtggtgtccgaggcttacaactacagtccagactgggcagagattttgtac
cagagggtgatcctgaaaggagactttgtgtacctggaggagctgaaacgcctccgtccg
cttccctccagtctgttcgaggatattttcaaaaagcttgacggcgctcccagcagcatc
acgtccaacgccaagcgtctgctcatgtactgtgatgacgtgtgcagccgctacagactg
gccttccagaacaatctgtatgacgtcaccaaaacgctgctgcaagacgccaagacctcc
agctacctgaacgacaggctgcccagatga
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integrated database retrieval system
