Antennarius striatus (striated frogfish): 137603774
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Entry
137603774 CDS
T10427
Name
(RefSeq) protocadherin-15-like
KO
K16500
protocadherin-15
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
astr03037
]
137603774
04515 Cell adhesion molecules [BR:
astr04515
]
137603774
Cilium and associated proteins [BR:
astr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
137603774
Cell adhesion molecules [BR:
astr04515
]
Cadherins
Protocadherins
137603774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
SprA_N
GHMP_kinases_N
Motif
Other DBs
NCBI-GeneID:
137603774
NCBI-ProteinID:
XP_068183627
LinkDB
All DBs
Position
11:complement(10260947..10466952)
Genome browser
AA seq
1729 aa
AA seq
DB search
MQRGWWLVRWLGTGTAILSLLTHSWGQDTEDWQYEECKLSRPGPPATIVTIDEESPNGTV
LVENMQINGRAQDPGRTISLTLLDNYDHWVILEPARQRLYLNSTGRILDRDPPNYITTIV
VQVQCTNELVGTVILHEVRIVVRDRNDNTPRFQQPRYYVAVNELTPVGTTIFTGFSGNNG
ATDIDDGPNGHIEYSILYNPNDPESNGTVGVANTLSGHITLAERLNYEERTRYLVVIQAS
DRAPYPPNRRTATTTLTVDVLDGDDLGPMFLPCILVNNTRDCNPLTYRVAIPEFTEPSKL
NPLNVTPPIRAVDMDRNIQPPSDRPGILYYILVGHPVTYREHFSLNRTTAELRVLQPISR
DLYQRFTLIIKAEQDNGHPLPAYADLIIEILDENNQAPYFQFATYQGYVSESSPVGTTIS
VNANLTAPLGIIALDNDIEEMKDPMLKITLDDYTAIFGLTQTGIIRYLRLLKPVDREKQM
VYTFTMVASDGVQQSSPVTVNILVIDANDNTPTFAEVSYSVEVFTDMQPGETVLQLTAED
ADEGLNGLVTYEILAGAQGDFVINNRTGRITVAPGITLTVGRSYALTVKASDNAPEIQRR
SSITTVYIEVLPPNNQSPPRFPLLTYGLEVSEAMRIGAILLNMQATDRENDPIIYRIVSG
DIDMVFNLSETIGLLLLGKPLDRETTDQYRLIVTASDGNPGGTSTTTVNIIVTDVNDNDP
EFDFTMSTNFTVREEQANLFVGQVRATDPDAGVNGQIRYRIVNHPDLFMISLNGSIFTRI
PLDRELRSQYDLVVEASDGAVDPRRTTITLSIHVTDIDDNSPVFSQQTYVVNVPENSPVG
TVILKLRASDSDLFSNVTYRIKTESARQLFSLNAITGEVAVQQTLDFEKLAAVGMGALYT
FQVEAVDQGSVMPPGQATVTVRITDMNDFSPVFSQELYKGMVAPNAEKGTRITTVFAEDQ
DPPGTPASFVRYRVDQDRSPYSGSIFDVEEDTGIVITKVNLNEEPSVIFKLFVIAFDDGE
PVKSNSTLVEITVLQPSRIPIFTQEEYRFPPVSELAPFGTLVGTILAAAVNQTIFYSIVA
GNELGHFQVNNKTGVISTAKPLDYENVTNYILRVQADSIMVVMSNLRAPSKTNTAKVFID
VEDENDHPPIFSRKLYIGGVTEDTKIFSSVLKIVATDKDTGNFSEMAYRLIIPPTQDGQD
SFVIETFTGIIKSAMMFRNMRRSFFKFEVIATDDYGKGLSSSAEVVVSVVNALDMQVVVS
TVPPTLVEENKEQLISILERHIQDQIPGAKVIVESIGPRRHGDGFELEDYTKSDLMVYAI
DPLTNRAISPKELFKFLDGNVLEINKEFQPYLGEGGRILEIRSPDIVASVKKAAQAVGYT
EGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQMALPPGGKTPTAGAPTT
NLYEELGDSSMRRGYGRQQQQLLRPSLLRPEELSMESGIDPGQDYYTQDYYNYDQGYGSR
RRLITPMYDEYGEVIMEDDGYYYGPEAGIKKRIKLAIDQENETSSTGEENTAETQRNRIP
NSHSNINGNIYLAQNGTIIRTRWSLHPNNLKVGSPCRLGKQFKKLDKLGVTHEEPPSSIS
TEGTGEDTEVGRGSIFPSTVDVNLNTRTLSGSQAPTIKDFGSFGKTHIAKTLIDRNSSGP
CISEDQLTSVVNHKDSKETLESRSDHTLSDEDELWMGPWNSLHIPMTKL
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggggtggtggctcgtcaggtggctgggaacaggaacggcaatcctttcgttg
ctaacacacagctggggccaggacacagaagactggcagtatgaggagtgtaagctgtct
cgaccgggcccccctgcaaccatagtgaccatagatgaagagagccccaatggtacagtt
ttggtggagaatatgcagataaatggccgtgcccaggatccaggtagaactatatcattg
acgttgctggacaactatgatcactgggtgatactggaaccagcacgacagagactctat
ctcaacagcactggacgcatcctggacagagatcctcccaactacatcacaaccattgtg
gtgcaggtccagtgtacaaatgagctggttggcactgtcattttgcatgaagtaagaatt
gttgttcgggacaggaatgacaacactcctcgctttcagcagccacgctactatgttgca
gtaaatgagctcacaccagttggaacaaccattttcactggattctcaggaaataatggc
gctactgatattgatgacgggcccaatggacatatagaatatagcattctttataaccca
aatgatccggaatctaacggaacagtgggtgttgctaacaccctttcaggacacattacc
cttgcagaaagactaaactatgaggagagaacccgctacctggttgtgatccaagccagt
gatcgtgccccataccctcccaacagacgaacagcaaccacaactttgactgtggatgtt
cttgatggagacgacctgggacccatgtttcttccgtgtatcttagtgaacaacaccaga
gactgcaatcccctcacctaccgtgtagccatccctgaattcactgaaccgagtaagctg
aatccactgaatgtgacccctccgatccgggctgtggacatggacagaaacatacaacct
ccatcagacagacctggcattctttattacatcttggttggtcatccagtcacatatcga
gagcatttttccctgaacagaactactgcagagctacgggttttacagccaatcagcaga
gatttgtatcagaggtttacactcattattaaggctgaacaggacaatggtcaccccctc
ccagcctatgctgacctcattattgagatcctcgatgaaaacaaccaggcaccatatttc
cagtttgccacctatcagggttatgtgagtgagtcctcgccagtgggtacgactatctca
gtcaatgccaacctcacagcccccctgggaatcatcgccctggataatgacattgaagag
atgaaagatcccatgttgaagattacccttgatgactacactgcgatctttggcctgacc
cagacagggataatacgttacctgaggctcctcaaacctgtggatcgagagaagcagatg
gtctatactttcacgatggtggcatctgatggcgtccagcaaagtagcccagtaactgtc
aatatcctggtcattgatgccaatgacaatacacccacatttgctgaagtctcctacagt
gttgaagtcttcacagacatgcagccaggggagacagtactacagttgacagcagaagat
gctgatgaaggactgaatggtctggtgacgtatgagatactggctggtgctcagggagac
tttgttattaacaatcgcactggacgcatcactgtggcacctggtatcactttaactgta
ggacggtcttatgcactgactgtcaaggcctctgacaatgcaccagaaatccaaaggagg
agctccatcactacagtctacattgaggttttgccaccgaataaccagagtcccccacgc
ttccctctcctcacctacggcctagaagtcagtgaggccatgagaataggagctattcta
cttaatatgcaggccacagacagagagaatgacccaatcatataccgtattgtgagtggg
gatatcgatatggtcttcaacctctctgaaacgattggcctacttcttctgggcaagcct
ctggacagagagaccacagaccagtatcgtctgatagtcacagcctccgatggcaaccct
ggagggacatccactaccactgtgaatatcattgtgactgacgtcaatgataatgaccca
gagtttgacttcaccatgtccactaatttcaccgtcagagaagaacaggccaatttattt
gtcggacaagtcagggccacagatccagacgctggagttaatggccaaatacgctaccgg
attgtaaatcatcctgacttgtttatgatcagcttgaatggcagcatcttcacaagaata
cctcttgatcgggaacttagaagtcaatatgacctggtggtggaggcctcagatggggca
gtagatccaagaaggaccaccattacactctcaatccacgttactgatattgatgacaac
agccccgtcttctcccagcagacctatgtggtgaatgtaccagaaaacagtcctgtagga
actgtgatcctgaaactaagagcatcagactcagaccttttctccaatgtcacatatcgt
atcaagactgaatcagcaagacaactgttttctctgaatgccatcaccggagaggtggcc
gtgcagcagaccctggactttgagaaactggcagcagtgggaatgggggccttatatact
tttcaggtagaagctgtggaccaaggatcggtcatgcccccaggacaggctactgttacg
gtccgcatcacggacatgaacgacttctccccagtgtttagccaagaactttataaggga
atggtggcacccaatgcagaaaaaggaaccaggatcacaactgtttttgctgaggaccag
gatcctccaggcaccccagccagttttgtccgctacagagttgaccaagacagatcacca
tatagtggaagcatctttgatgtggaggaagacactggcatagtcatcactaaagtcaat
ctcaatgaagagcccagtgtcatatttaagctgtttgtaatagccttcgatgatggagag
ccggtgaagtctaacagtactttggtggagatcactgtccttcagccatcacgcatcccg
atcttcacccaggaggagtacaggtttcctccagttagtgagctggctccatttggcacc
ctagtggggacgattctagctgctgctgtcaaccaaactatcttctactctattgtagca
ggaaatgaactgggtcattttcaggtaaacaacaagacaggtgtcatctccacagccaaa
cctctggattatgaaaatgtgaccaactacatcctccgggttcaggcagattccatcatg
gttgtcatgtccaacctgcgtgcgccttctaaaactaacacagccaaggtgttcattgat
gtggaagatgagaatgaccaccctcccatattctccaggaagctctacattggaggcgtg
acagaggacaccaagatcttcagctctgtgctaaaaatagtggccactgacaaggacacc
gggaatttcagtgagatggcatatcgcctgattatcccacccacacaagatggccaagac
agctttgtcattgagacgttcacgggtatcatcaagtcagccatgatgtttcgaaacatg
cgcaggtccttctttaagtttgaagttattgcaacggacgattatggcaaaggtctcagc
agtagtgctgaagtggtggtttctgtggtcaacgcgttggacatgcaggttgttgtgtcc
acagtcccacccactttagtggaggagaataaggagcagctgattagcattctggagcgc
cacattcaagaccagattccaggtgccaaggtgattgtagagtccattggaccacgtcgt
catggtgatggctttgaactagaggactatactaagtcggacctgatggtgtatgccatt
gatcccctcacgaacagggctatttcgcccaaggagctttttaaatttcttgatggcaat
gtgctggaaatcaacaaggagtttcagccctatctgggtgaaggtggccgcatcctagag
attcgttctccagacattgtggccagtgtgaagaaagcagcccaggctgtgggctacaca
gagggagcactcctggccctcgctataattatcatcctctgctgcatccccgccatcctc
attgtcatggtcacctacaaacagttcaaagagcgacaggcagagtgtgccaaaactgcc
aggattcaaatggctttacctccaggagggaaaacacccacagcgggtgcccccactaca
aacctgtatgaagagctgggcgacagcagcatgaggagaggctacggcagacagcaacag
caactactgaggccatctcttttgagacctgaggaactctccatggagtcaggtatcgac
ccaggccaggattactatacacaagactactataattatgaccaagggtatggcagtcga
aggaggctgataactcccatgtatgatgaatatggagaggtgataatggaggatgatggg
tattactacggccctgaggctgggataaaaaagcggattaagctggcgatagatcaggag
aatgagaccagttccacgggagaggagaacaccgcagagacccagcggaataggataccc
aacagccacagcaacattaatgggaacatctacctcgcgcagaatggcactattatcaga
acaaggtggtcactccaccctaataacttgaaggtggggtctccatgccggcttggtaag
cagtttaaaaaactagacaaattgggtgtgactcatgaagaacccccttccagcattagt
actgagggcacaggagaggacacagaagttggaagaggttctatctttccctctactgtg
gacgtcaacctcaacactcggaccttgtctggctcccaggcacccaccatcaaagatttt
ggaagttttggaaaaacccatattgccaagactttgattgacagaaacagcagtggccca
tgtatcagtgaggatcaattgacttctgttgtcaaccacaaggacagtaaggagacactg
gagtcccgcagtgaccacacattatcagacgaggacgagttatggatgggcccctggaac
agcctgcacataccaatgacaaaactctga
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integrated database retrieval system
