Armigeres subalbatus: 134212843
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Entry
134212843 CDS
T09975
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
asua
Armigeres subalbatus
Pathway
asua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134212843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asua03019
]
134212843
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134212843
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134212843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
134212843
NCBI-ProteinID:
XP_062547046
LinkDB
All DBs
Position
2:complement(340355343..340395053)
Genome browser
AA seq
2423 aa
AA seq
DB search
MNQEPCSYALTQISYLVSNLNKKNFASNSRQLAQFVKDFGLEADRHLLRCLFSTVDFSCS
GSKSGDAAANSTPGHSRSNSTSSSASNSNHNSYRSGPLSLQARLLSTELVGLLTKPQLVG
NICFAVDNPLPQQRTLTPSTSLVTQIVRTLNCSPIQQAALALALIHSSHPDIVRSAEENA
RSCIAELIQSYIDQDTNQPTQEGSLNDVSPELLQHILSLISHDKHLDFGLSDSTYGKFVQ
QLCRDFPRERVPLILAPLLYPENSELSAESVKSNTQSLLLSSIMDTAWGSLVMEIGYGFT
ASVEDCKNHLLKVGGREISAQDVAKIISSMCLTHASLSESSINLPTPSSFWPQGSDPGGK
GKDGQNGGSSSENSTWKPEIFVQALKEVVPSLNWKDVCLGLDHSNFLIKDRPGLALLLSI
VKMGMQASGLGQNFPVECVYQRWTNVEGQLSLITMILKSPDLYSFADHIYTSVSVDLLKT
PPETDNKEVASWLSLHLVDVLLYIADNGFYAQAMEIFKIPIQLCPDILFMALLQINPPVT
VSRQELFTTLIPIFLGNHPNSGTILHHAWNNTSFNPSLRHIILHSMSEWYLRGESDQSRL
SRILDVAQDLKALSNLLNVRSFIFIIDLACLASRREYLKLEKWLADKIREHGEPFVKTII
KFLQRRFPQIMMGKFADEQIPKSAQLPPETLSTILSCLQACVGNVSPEVADIIMSMTQYN
ILLTSKTRAQQASQQQQPPPPGVVRPHRVLEAPFSASTLGGQIFPGASVESLSGLANNMA
GLNLGGPGNSAFSFGSALGNLVSTPASPSRLLAGPSNSPFPLMSMPPTAPVGNIGRLPQT
PTGDKLAMATAGQTNFAEIGMQAVSKEVEDEANSYFQRIYNHPPHNTLSIDEVLDMLQRF
KDSPIRRECDVYQCMLRNLFEEYKFFPQYPDKELQITAQLFGGMVERNLVTTYVALGLAL
RCVLDALKKPEGSKMYYFGITALDRFKNKLHLYPKYCEYVHGIPHFDQFPPHLIEYIEYG
AQGQEPPNKTLGPGPLPSSITQLLPGPSGVGGGNPLYRTSSATGTSNLTSAAPPAAPKVN
LGSQLGTTNQPPRVKSIANATNIDTLLVATQEGEEKIINPPDAIQDKTAFIFNNLSQLNL
QQKCEEIKDILQKDYYVWLAQYLVLKRASIEVNFHVLYSNFLDALKIQDVNKLVTKETFR
NIKVLLRSDKAIANFSDRSLLKNLGHWLGMMTLGRNRPILHLDIDMKSLLVEAYNKGQQE
LLYVVPFVAKVLESCSKSKVFKPPNPWTMAIMNILAELHQEPDLKLNLKFEIEVLCKNLN
IDVGDLKPAIYLKDPERAQNIEYQLSQPKPAKELQPIQVIQVTEEIASAGPSGSPAMPVM
DPSLAVTGPPEPRFHYSDINITNFACINQHVIYSPNIALLHTHPHLKQIIKNALERTITD
WITLVVERSVKIASKTCEQIIRKDFALDPDELRMRTASHNLARNLAAGMAMITCRDQLMQ
NIQNNIKTAFMTTLSPAQKEVAEAAANQLAADNMELVSAFIQKTAIEKVVPEMDKLLSTE
YEMRKMARQEGRRYCDPSVLTYQAERMPERIRLSVGGVSPSQLAVYEEFARNIPGFQPIT
DRDNALFAPKLQEALPTVAQFPTPAAVAPDEIGVLYDELASKMEVFISSAVNVPQLHVHV
NNMHTLLECLIIARRSRDNLTACNLLNKAVEGIMEGLMNIPDHIDQIKLFRDIHLRVMRL
LQDPRAFGPIWTNKAITRYMLECREEIRYNVEAVDLLISSSFVNMPQYDMMLMQLMDNGN
NYVAVVFAMQLVQTYFIDERQNTVITDNDLLNTIELLARLAAHPRAPEGLAHLMEMLRSN
HDPNTFLVDRAHAGPTAHIHSGIIIARATDIEDPPGFAERAEYLLKDWITIFHTPSNSKD
MIKAFGGFVNKMNVYGILKGDEPLTRFFRHATQSCIDLTYRNMNDPNWKTKIFQWIDAYV
RLIAMLVKHSGEGGSTSTKLNLLNKVLGIVVGILMQDQELHGTAFQQMGYHRIFIMLFLE
LSAHDPVLENISLSVITAFCHTYHILRPSLAPGFCYSWLELISHRVFIGRILASIPQQKG
WSMYSQLLIQLFKYLAPFLRNAELAKPVQHLYKGTLRVLLVLLHDFPEFLCDYHFGFCDV
IPPNCIQMRNLILSAYPRNMRLPDPFTPNLKVDMLTDIGGSPRIFTNYAAAITPSSFKKD
LDSYLKARSPVTFLSELRSNLQISNEPGSRYNIPLMNALVLYVGTQAIAHIRSKNLGPTM
ATIVHSAHMDIFQNLAVDLDNEGRYLFLNAIANQLRYPNSHTHYFSCAILYLFVEANSEA
IQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWDHDFVHCAPEIEKLFESVANS
CMVVKSKSQPQMPNVESEIAECN
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagccctgctcatacgccctaacccagatcagttacctggtttcaaacttg
aacaagaaaaactttgcctcaaacagtcgacaattagctcagtttgtaaaagattttgga
ttagaagctgatcgtcatttgctgcgctgtttattctctacggttgatttctcctgctcg
ggttcgaaatctggagacgctgctgccaacagtaccccgggacattccaggagcaacagc
accagcagtagtgccagcaatagcaaccacaacagctacaggagcggaccgttgtcactg
caagcccgattgctgtcgacggaactggtcgggctgctcacaaaaccgcagctcgttggg
aacatttgctttgccgtggacaatccgctgccgcaacaaaggacactaaccccatcgaca
agtctagtaactcaaatcgttaggaccctcaactgttcaccgattcaacaagccgcactt
gccctcgcacttattcattcatcgcatccggatattgtgcgaagtgctgaggagaacgct
cgaagttgcattgccgaactcattcaatcttatatcgaccaagacacaaaccaaccaact
caggagggaagtcttaacgacgtatctcctgaactcctgcagcacatactatcgttaatt
tctcacgacaagcacctggacttcggtctatcagactcgacttacggaaagtttgtacag
caactgtgccgtgactttcctcgggagcgggttccattgatcctcgctccgctgctgtat
ccggaaaattcggaactttcagccgagtcggtcaaatcgaacactcagtcgctgctgctt
tcttcaatcatggatacggcctggggaagtcttgtgatggagatcggatacggtttcact
gcctcggtggaggattgtaagaatcatctgctgaaggtcggtggtcgcgagatttccgcc
caggatgtcgcaaagatcatttcgtcaatgtgtctcacccatgcgtcgctttcggaaagc
agcatcaatttgccgacgcctagtagcttctggcctcagggcagcgatcccggaggaaaa
gggaaggacggccaaaatggcgggtccagttctgagaacagcacctggaagccggagata
ttcgtgcaggctttgaaagaggtggttcccagcttgaactggaaggatgtttgtttgggt
ttggatcactccaattttctgattaaggatcgaccaggattagcattgctgttatctatc
gtcaaaatgggaatgcaggcaagcggtctggggcagaacttccccgtggaatgtgtctat
caacggtggacgaatgtggaaggacaattgtccctaataacaatgattttgaagagcccc
gatctgtactcgtttgcagaccacatttacacgagtgtttcggttgatctgctgaagact
ccaccggaaacggataataaggaagttgcatcgtggttgtcacttcatctagtggacgtt
ttgttgtacattgctgacaacggattttacgcacaggcgatggagattttcaagatacca
attcaactgtgtccggacattcttttcatggcattactgcaaatcaatccaccggtaact
gtctctcgccaggaattgttcactacgttaatcccgatatttctcggcaatcatccaaac
tcgggtacgattttgcatcacgcatggaacaacaccagctttaatccctcgctgagacac
attattctgcattcgatgagcgaatggtatctgcgtggagagagtgatcagtcacgactg
tctcggattctagacgttgctcaagatttgaaagccttgtctaacttactgaacgttaga
tcgttcatattcatcattgatttggcatgtctcgcatctcgtcgcgaatatttaaaactg
gaaaaatggctagcggacaagattcgagagcatggggaaccgttcgtgaagacgatcatc
aagtttttgcagcgtcgtttccctcagataatgatgggaaaattcgccgacgagcagatc
cctaaatcggcccaattacctccggagaccttgagcactattttgtcctgtttgcaggcc
tgcgttggaaatgtgagtcctgaagtcgctgatattatcatgagcatgactcaatataac
attcttttgaccagtaagacaagagcacagcaagcttcgcagcaacaacagccaccgcca
cctggagttgtaagaccgcatcgtgtattggaagctcccttcagtgcatcgacattggga
ggtcaaatatttccaggggcgtcggttgaatccttatctgggttggcaaataatatggct
gggctcaatttgggaggaccaggcaacagtgcattcagcttcggaagtgctcttggcaat
ctggtatcgactccagcatcgccatctaggctgctggccggaccatcgaatagtccattc
ccgttgatgtcgatgcctccgacggcacccgtcggaaacattggacgtttgccacaaact
ccaactggtgacaaactcgctatggctactgccgggcagactaattttgccgaaatcgga
atgcaagctgtttccaaggaggtggaagatgaagccaatagctacttccaacgaatttac
aaccatccgccacataacacactgtctattgatgaggttctggatatgttgcagcgattc
aaggattcccccatccgtcgggaatgtgatgtgtatcaatgcatgctgcgtaatcttttc
gaggaatacaaattcttcccccagtatcctgataaagagctgcagatcactgctcaatta
ttcggtggaatggtagaacgaaacctggtaacaacttacgttgctctcggattagcgttg
cgttgtgtgctggacgcgctcaagaagccggaaggctctaagatgtactactttggaatc
acggctctcgatcgcttcaaaaataagctgcatctgtatccaaaatactgcgagtacgtc
catggaattccacactttgatcagttcccaccgcacttgatcgagtacatcgagtatgga
gcgcaaggtcaagagcccccgaacaagaccctcggaccgggaccgttgccgtcatcaatc
actcaacttcttccgggtccttccggagtaggtggtggaaatccgctctatcgtaccagt
tccgccacgggaaccagtaatctcacatcagctgctccgccggccgcacccaaagtaaat
cttggatctcaactgggtactaccaaccagcctccaagggtcaagtccattgcgaatgct
accaacatcgacaccctgctagtggctacccaggaaggtgaagagaagatcatcaatcca
ccggatgctattcaggacaaaactgcattcatcttcaataatctcagtcaattgaatctt
cagcaaaagtgtgaggaaatcaaagatattctacagaaagactactacgtgtggttggcc
cagtatttagttttgaagcgagcatcaatcgaagtgaatttccatgttctgtactcgaac
ttcttggacgctttgaagattcaggatgttaacaaactagtaacgaaggaaactttccgt
aacatcaaggtcctgcttagatcagacaaagcaatcgccaacttctccgatagaagtctg
ctgaaaaatttgggacattggctcggaatgatgactttgggtcgaaacagacctattctt
cacttggacattgacatgaaatccctacttgtcgaggcatacaataaaggccaacaggag
ctgctttatgttgttccatttgttgccaaggtactggaatcgtgctcgaaaagtaaggtc
ttcaaaccacctaatccatggaccatggcaattatgaatattcttgctgagttgcaccaa
gagccggatctaaaactgaatctgaagttcgaaatcgaagtactatgcaagaaccttaac
atagatgtaggagatttgaaacctgccatctacctgaaggatccggagcgcgcacagaac
atcgagtatcaactatcgcagcctaaacctgctaaggaactgcaaccgatccaagttatc
caagttacagaagaaattgcatccgccggaccatctggatcaccagccatgcccgtaatg
gatccatcgctagccgtcactggtccaccggaaccgcgattccactactcggacatcaac
atcaccaatttcgcttgcatcaatcagcacgtcatatactcccccaacattgcacttctg
cacacccatcctcatctcaagcagatcatcaagaacgccctggaacgaaccatcaccgac
tggatcacgctggtagtcgaacgcagtgttaagatcgcatctaaaacatgcgaacaaatc
atccgaaaggactttgcactggaccccgacgagctacggatgcgaacggcgtcgcacaat
cttgctcgcaatctggctgccggtatggcgatgataacctgccgggatcaactgatgcag
aatattcagaacaacatcaagacggcgttcatgactacgcttagcccggcccagaaggaa
gtggcagaagcggccgcgaatcaactggcagccgataacatggaactggtttcggcgttt
attcaaaagactgctattgaaaaggttgtgccggaaatggacaaactgctctcaacggag
tatgaaatgcgtaagatggctcgccaggagggacgtcgctactgcgatcccagtgtgctg
acttatcaagcggaacggatgccggagagaattcgtctcagcgtcggtggcgtgtcgccc
agtcagctggcggtgtatgaagaatttgccaggaatattcccggattccagccgattact
gatcgtgacaatgctctgtttgctcctaagttgcaggaagcgctcccaacggtcgcccag
tttcccacaccggcggctgttgctccagatgagataggagtgctttacgatgagctggcc
agcaaaatggaagttttcattagcagcgcagttaatgtacctcaattgcatgtccacgtc
aacaacatgcacacgctgctggaatgtctcatcattgcacgtcgttcgcgggacaatctc
actgcatgtaatctgctaaataaagcggtcgaaggaatcatggagggcctgatgaacatc
ccggaccatatcgatcaaatcaagttgttccgcgacattcacctacgtgtgatgcggctg
ctgcaggatcctcgcgcctttggaccgatttggaccaacaaagccatcacccgatacatg
ctggaatgtcgagaggaaatccgctacaatgtcgaagcggtcgatctgctgatctcttcg
agttttgttaacatgccacaatacgatatgatgttgatgcagctgatggacaacggaaac
aattacgtagccgttgtgtttgccatgcagcttgtgcagacgtactttatcgacgagcgt
caaaatacggttattaccgacaatgatttgctgaatacaatcgaattgctggccagacta
gcggctcatccgcgagcaccggaaggtttagctcatttgatggaaatgcttcgatcgaat
catgatccgaacacattcctcgtggatcgagcccacgctggacctacggcgcacattcat
tctggtatcatcatagccagggccaccgacatcgaagacccgccgggatttgccgaacga
gcagagtacctgctaaaagactggattacaatttttcacaccccttccaattcgaaggac
atgattaaagcgttcggaggtttcgtcaacaagatgaatgtatacggaatactgaaagga
gacgaaccgctgacgagattcttccgtcatgccacgcaatcctgtatcgatctgacctat
cgcaacatgaacgatccgaactggaaaacgaaaatcttccagtggatcgatgcttacgtt
aggttgattgctatgcttgtgaagcattctggggagggtggtagcaccagcactaaattg
aatttgttgaataaggtcttaggcatcgtggttggcatcctgatgcaggatcaagaattg
cacggcactgctttccagcagatgggctaccaccgtatcttcattatgcttttcctggag
ttgagtgcacatgatccggtgctagaaaatatcagtctcagcgtgatcactgccttctgt
cacacgtatcacattctgcgaccatcattagcccctggcttctgctattcctggttggag
cttatttcgcaccgggtattcatcggacgcatcctggcgtccattccacagcagaagggc
tggtccatgtattcgcagttgttgatccagttgttcaagtatttggctccgttcctacgc
aacgccgaactggccaagccggttcaacatctctataagggaacactgcgggtgctgctt
gttctgttgcatgacttcccagaatttttatgcgactatcactttggtttttgcgacgtt
ataccaccgaactgtattcagatgagaaatctgattctgtcggcatatccacggaacatg
cgtctgccggatccattcactcccaatcttaaagttgacatgttgaccgacataggaggt
tcgccacgcatctttacgaattatgctgccgcaataactcccagcagtttcaagaaagat
ctagattcatatttgaaagcacgatcaccggtgacgttcctttcggagctgcgtagcaac
ttgcaaatctcaaacgaacccggatctcgctacaacatcccgctgatgaatgctttagta
ttgtatgttggcactcaggcaatcgctcacattaggtcgaaaaatttgggtcccacgatg
gcaaccatcgtccacagtgcccatatggatatcttccagaatctagcggtagatttggac
aacgagggtcgatatctgttcctgaatgcgattgccaaccagctgcggtatccgaacagc
cacacgcactatttcagctgtgcgatcttgtatctgttcgtagaagccaactctgaagcg
attcaggagcaaataactcgtgttctgctggaacgactcattgtcaaccgtccgcacccg
tggggattgctgattacgttcatcgagctgataaaaaacccaacttacaagttttgggac
cacgacttcgtccactgtgcaccggaaattgaaaaactgtttgaatcagtagccaactcc
tgcatggtggtcaaatccaaaagtcaaccacagatgccgaatgtggaatcggaaattgcc
gagtgcaactga
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integrated database retrieval system
