Atlantibacter subterraneus: NLZ15_20010
Help
Entry
NLZ15_20010 CDS
T08300
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
asub
Atlantibacter subterraneus
Pathway
asub02024
Quorum sensing
asub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLZ15_20010 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLZ15_20010 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asub03019
]
NLZ15_20010 (hfq)
03036 Chromosome and associated proteins [BR:
asub03036
]
NLZ15_20010 (hfq)
Messenger RNA biogenesis [BR:
asub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NLZ15_20010 (hfq)
Chromosome and associated proteins [BR:
asub03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
NLZ15_20010 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UTJ47078
LinkDB
All DBs
Position
complement(4213592..4213900)
Genome browser
AA seq
102 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGSTGSNYHHSNAQGASAPQQDSDDAE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcttgaacgcactgcgtcgcgaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaagggcagattgagtctttcgat
cagttcgtgattttgttgaaaaacacggttagccagatggtgtataagcacgcaatctct
acggttgtgccgtctcgcccggtttctcatcacagcaacaacgccggtggcagtacgggt
agtaactaccaccacagtaatgcgcagggtgcatctgcaccacagcaagacagcgacgac
gccgaataa
DBGET
integrated database retrieval system