Arthrobacter sulfonylureivorans: MNQ99_09290
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Entry
MNQ99_09290 CDS
T08235
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
asuf
Arthrobacter sulfonylureivorans
Pathway
asuf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNQ99_09290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asuf03019
]
MNQ99_09290
03009 Ribosome biogenesis [BR:
asuf03009
]
MNQ99_09290
Enzymes [BR:
asuf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MNQ99_09290
Messenger RNA biogenesis [BR:
asuf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MNQ99_09290
Ribosome biogenesis [BR:
asuf03009
]
Prokaryotic type
rRNA processing factors
MNQ99_09290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
UNK47492
UniProt:
A0ABY3WGR7
LinkDB
All DBs
Position
1983679..1987554
Genome browser
AA seq
1291 aa
AA seq
DB search
MDNEQVIPATSAPAESPEGTAKKPPRPRRKPTVSAPSQDQLDVQLPAAAVDSTNDGGASS
AAPGTDAAPAAEQPAGVAPEGSQSAGPAQAATTRTRRPRKTAAEKAAEAAAAQASQQDEA
AAAASGTVAASVGGPDAAPAAEAAPAAKTRTRQPRKTAAQKAAEAAAQEAALQEGTDAQP
AAEPTEATGGAAPDGVLDPAVQADDDAAGKPARKRRSRAAQPVEQPVDADGILEAEGAEE
PAEKPAGRRRTAATTRTRRSTSAQTTEAAAELTTAEGEAPADAQEPAAAEADPSGAQAAT
AQTAAAMQAAGAGVATEPASEAAGTEPAGEQPAKAPSRRRRSTGATAPAATETAEATAAE
QPAPAAGSAAEEEQAEEAAEAGAGNDPFTIPSSPVSLLFHAPDLSAVAAKPETAAAADSE
EEDEDGGQRRSRRNRRGRTRNRAEESGSGEAGGAEGTDEAAESAEEGAAGEKDGVTSRRR
RRRRRGDADLELTGGSEDDPPNTVTRVRAPRPVAETAPSNKVASVKGSTRLEAKKQRRRE
SRESGRRRQVITEAEFLARRESVDRQMVVRQRDDRIQIGVLEDGVLAEHFVSKTQQDSLI
GNVYLGKVQNVLPSMEAAFIDIGRGRNAVLYAGEVNWDAAHLDGQPRRIELALKSGDSVL
VQVTKDPVGHKGARLTSQISLPGRFLVYVPGGSMTGISRKLPDVERNRLKKILKEHVPDG
AGVIVRTAAEGASEEELMNDINRLRAQWEGIESRAGSTKTLAPEMLYAEPDLTIKVVRDV
FNEDFSKLVVSGEEAWDTIEAYVTYVAPDLVDRLEKWTSETDIFAAQRLDEQIHKALDRK
VFLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGG
IIVIDFIDMVLESNRDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLLEVFG
EQCEHCAGRGVITHDEPVEHRRVGAATEHHQVRIEKRSERQSRSEKRRSRGQGQQESPSE
TPAPVVQEDDAERKAKAEAARAALANIAAAAHAAHEAEEHPEAAKAKQHDAEAAPAASGA
GKPDVAAATAPAQGQPAATGRKRRSRRADDSGIAAVAAPAATADEDGGAGVLKINGETVA
IPRATHAPVAAPAEPSLTLESLTEAFNKVAPVEKPERTAPVAAPEPAAAVQSQAAEPSVA
ADQVRPVAAEPQAPAAAPVRKPRRRRAASSPQGAADAPVETVDAAVSPEGNGSHRHAAAA
PAAPALAEAAAGKAEAAAPLVLGVGVPASEL
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggataatgaacaggtaatacccgctacctccgcaccggccgagtcgccggagggaaca
gccaagaaaccgccgcgcccccgtcgcaaacccactgtgtccgcaccgtcgcaggaccag
ttggatgtgcaactgcctgccgcggccgttgattccacgaacgacggcggtgcctcctcc
gcagcgccgggcaccgatgcggctccggcggcggagcagccagccggggtagctccggaa
ggcagccagtccgccggacccgcgcaggcagccaccacccgaactcgccggccgcgcaag
acggccgccgagaaggccgccgaagcagcggccgcccaggcctcgcagcaggacgaggcc
gccgccgcggcgtcagggactgtcgccgccagcgttggcggacccgacgccgccccggct
gccgaagcggcacctgccgccaagacccgaacccgccagccgcgcaagaccgccgcgcag
aaggccgcggaagcagcagctcaggaagcggcactgcaggaaggcaccgacgcacagcct
gccgccgagccgaccgaggccaccggcggagccgctccggacggcgtgctggacccagcg
gtgcaggccgatgacgacgccgcaggcaagccggcccgcaagcgccgcagccgtgcggcg
cagccggttgagcagcccgtcgatgccgacggcatcctggaggccgaaggcgcggaggaa
cccgccgaaaagccggccggccgccgtcgcactgccgccacgacccggacccgccgcagc
acctcggcgcagaccaccgaggctgccgccgaactgaccaccgccgaaggcgaggccccg
gccgacgcgcaggagcccgcggccgcggaagcggacccttcgggcgcccaggcagccacc
gctcagaccgccgcggctatgcaggccgccggtgcaggggtagccaccgagccagcctct
gaggccgccggtaccgagccagcaggcgagcagcccgcgaaggcgccctcccgccgtcgt
cgttccactggggcaacggcccccgccgccacggaaacagcggaagccaccgccgcggag
cagcccgcacccgcagccggctctgccgccgaagaggaacaggccgaagaagcggcggaa
gcgggtgccgggaacgatccgttcaccattccgtcctcgccggtatccctgctcttccac
gcaccggacctgtccgccgtagccgccaagccggaaacggccgcggcagcggactccgaa
gaggaagacgaagacggcgggcagcgccgcagccgccggaaccgccgcgggcgcacccgc
aaccgtgccgaggaatccggcagcggcgaggcgggcggcgccgaaggaaccgacgaggcc
gccgaatccgcagaagagggcgctgcgggggagaaggacggcgtgacgtcgcgccgccgt
cgccgtcgtcgccgcggcgatgccgatctggaactcaccggcggctccgaggacgatccg
cccaacactgtcacccgcgttcgggcgccgcgcccggtggcggagaccgctcccagcaac
aaggtggcctcagtcaagggctccacccggcttgaggccaagaagcagcgccgccgcgaa
tcccgcgagtccggccgccgccgccaggtgatcaccgaggccgagttcttggcccgccgc
gaatccgtcgaccgccagatggtggtccgccagcgcgacgacaggatccagatcggcgtg
ctcgaagacggtgtactcgcggagcacttcgtctccaagacgcagcaggattcgctaatc
ggcaacgtctacctgggcaaggtacagaacgtgctgcccagcatggaagcggccttcatc
gacattggccgcggccgcaacgccgtgctctacgccggtgaggtcaactgggacgccgcc
cacttggacggtcagccgcgccggatcgagctcgccttgaagtccggtgattcggtgctg
gtgcaggtgaccaaggatccggtgggccacaagggcgcccgcctgaccagccagatctcg
ctgccgggccgcttcctggtctatgtacccggcggttcgatgaccggcatctcgcgcaag
ctgcccgacgtggaacgcaaccggctgaagaagatcctgaaggaacatgttccggacggc
gccggcgtgattgtgcgcaccgcggccgaaggcgccagcgaagaagagctgatgaacgac
atcaaccggctgcgcgctcagtgggagggcatcgaatcgcgtgccggctccaccaagacg
ctggcaccggaaatgctctacgcggagccggacctgaccatcaaggtggtccgcgacgtg
ttcaacgaggacttctccaagctggtggtttccggcgaggaagcctgggacaccatcgag
gcctacgtgacctacgtggccccggacctggtggaccggctggaaaagtggacgtcggag
acggacatcttcgctgcccagcggctggacgagcagatccacaaggcgctggaccgcaag
gtgttcctgccgtccggcggctcgctggtgatcgaccgcaccgaggcgatgaccgtggtg
gacgtcaacaccggcaagttcaccggttccggcggcaaccttgaggaaaccgtcaccaag
aacaacctggaggcggccgaggaagtggtccgccagctgcggctgcgcgatatcggcggc
atcatcgtcatcgacttcatcgacatggtgttggagtccaaccgggacctggtgctgcgc
cggctggtcgagtgcctgggccgcgaccgcaccaagcaccaggtggccgaggtgacctcg
ctgggcctggtccagatgacgcgcaagcggatgggcaccggtctgctggaagtcttcggc
gagcagtgtgagcattgcgccggccgcggcgtgatcacccatgacgaaccggtcgagcac
cgacgcgtcggtgccgcgaccgagcaccaccaggtccggatcgagaagcgttcggagcgg
cagtcccgcagcgagaagcgccgcagccgcggccagggccagcaggagtcgccctccgag
acgccggcacctgtggtgcaggaggacgacgccgagcgcaaggccaaggccgaggccgcc
cgtgcggcactggccaacatcgccgccgctgcccatgccgcccacgaggcggaagagcac
cctgaggcggccaaggccaaacagcacgacgccgaagcagcccccgcagccagcggggcg
ggcaagcccgacgtcgccgccgcaacggccccggcgcagggtcagcctgccgccaccggc
cgcaagcgcaggtcgcgccgtgccgacgattccggcattgccgcagttgctgccccggcc
gcgacggccgacgaggacggcggagcgggagtgctgaagatcaacggcgaaaccgtcgcc
attccgcgcgccacgcacgctccggtggccgcgccggctgagccgtcgctgaccctggag
agcctgaccgaggccttcaacaaggttgccccggtggagaagccggagcggaccgccccg
gtagccgcaccggaaccggccgcggcagtccagtcccaggcggccgagccgtcggtggcg
gcggaccaggtccggcccgtggccgccgagccgcaggctccggccgcagccccggtccgc
aagccgcgccgccgtcgtgctgccagcagcccgcagggtgcggccgacgctccggtggag
accgtggatgccgccgtctccccggagggcaacggcagccaccggcacgccgcagcggcg
ccggcagcgcccgccttggccgaggcggcagcaggaaaggccgaagccgccgctccgctg
gtgttgggcgtgggagtgcccgcctcggagctgtag
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