Arthrobacter sunyaminii: KG104_14725
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Entry
KG104_14725 CDS
T08124
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asun
Arthrobacter sunyaminii
Pathway
asun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG104_14725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asun03019
]
KG104_14725
03009 Ribosome biogenesis [BR:
asun03009
]
KG104_14725
Enzymes [BR:
asun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KG104_14725
Messenger RNA biogenesis [BR:
asun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG104_14725
Ribosome biogenesis [BR:
asun03009
]
Prokaryotic type
rRNA helicases
KG104_14725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QWQ35703
UniProt:
A0A975PE55
LinkDB
All DBs
Position
complement(3257644..3259548)
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AA seq
634 aa
AA seq
DB search
MLDTVENTDTAATAAPEAAEENQVLFTDFGLDARVLQALVDVGYEKPSPIQAATIPLLLE
GRDVVGLAQTGTGKTAAFAVPALSLMAGLPATKDTQILVLAPTRELALQSADAFASYAKH
MDNFTVLPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHISKGSLDLSNLQYLVLDEADE
MLRMGFAEDVEQILATTPADKQVALFSATMPGAIRKIAKKYLNNPAEITVKSKTTTGANT
RQRYVQVMGPHKLDAMTRILESEDYDGVIAFVRTKMATEDLADKLKARGYLAAAINGDIP
QQQRERTVEALRSGKIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAG
RTGDAILFMTPREKYLLRAIEKATRQPVEHMQLPSIDIVNNKRLAKFSEQITETLASEDV
SVFRDLVTTYLADHDVTAEEVAAALAVMAQGGRPLLMEEIPQAPARQRERSEGRNDGNGS
RGPTRPLTEGNATYRIAVGRRQRVMPGSIVGAIANEGGLSSAQIGGIDIRADHTLVELPA
DLSQDQLRALSRTRIGGELIHLELDNGRKPARERESGGFNDRGDRGGFKKDFKKRDGERS
FGDRSGSDRGGFKKRDGDRGGFKPAGTRAPRFRD
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgacactgtagaaaacactgacaccgcagcaaccgccgctcccgaagcagccgaa
gagaaccaggttctcttcaccgatttcggtcttgatgcccgcgttctgcaggccctggtt
gacgtcggctacgaaaagccgtcccccatccaggcagccaccatccccctcctgcttgaa
ggccgcgacgtcgtcggcctggcgcagaccggtaccggcaagactgccgcgtttgctgtt
cccgccctgtccctgatggccggcctgcccgccaccaaggacacccagatcctggtgctg
gcaccgacccgcgaactggccctccagtccgctgatgccttcgcttcctacgccaagcac
atggacaacttcaccgtcctgcccgtctacggcggctccgcttacggcccccagctggcc
ggcctgcgccgcggcgcccaggttgttgtcggtaccccgggacgcgtcatcgaccacatc
tccaagggttccctggacctgtccaacctgcagtacctggttctggacgaggctgacgaa
atgctccgcatgggcttcgccgaggacgtcgagcagatcctggcgaccacgcccgccgac
aagcaggtggcactgttctccgccaccatgcccggcgccatccgcaagatcgccaagaag
tacctgaacaacccggcggaaatcacggtcaagtccaagacgaccaccggtgcgaacacc
cgccagcgctacgtgcaggtcatgggcccgcacaagctggacgcgatgacccgcatcctg
gaaagcgaagactacgacggcgttatcgccttcgtccgcaccaagatggccaccgaggac
ctggctgacaagctcaaggcccgcggttacctggccgcagcaatcaacggtgacatcccg
cagcagcagcgcgagcgcaccgtcgaggccctgcgcagcggcaagatcgacatcctggtt
gccaccgacgtcgccgcccgcggccttgacgttgagcgcatcagccatgtcatcaactac
gacattccgcacgacacggagtcctacgtccaccgcatcggccgtaccggccgtgcagga
cgcaccggcgacgcgatcctcttcatgaccccgcgcgagaagtacctgctgcgggccatc
gaaaaggccacccgccagcccgttgagcacatgcagcttccgagcatcgacattgtgaac
aacaagcgcctggcgaagttctccgagcagatcaccgaaaccctggcatccgaggatgtc
tcggtgttccgcgacctggtcacgacctacctcgccgaccacgacgtcaccgccgaggaa
gttgccgctgcactggccgtcatggcacagggcggccgcccgctgctgatggaagaaatt
ccccaggctccggcccgccagcgtgagcgctccgaaggccgcaacgacggcaacggatcc
cgcggcccgacacgcccgctgaccgaaggcaatgcgacgtaccgcatcgctgtcggccgc
cgccagcgcgtcatgcccggctccatcgttggcgccattgccaacgaaggcggactgtcc
tccgcacagatcggcggcatcgacatccgcgccgaccacacgctcgttgagctcccggct
gacctcagccaggaccagctgcgcgctctgtcccgcacccggattggcggcgagctgatc
cacctcgagctggacaacggccgcaagccggcccgcgaacgcgaaagcggcggcttcaat
gaccgcggcgaccgcggcggcttcaagaaggatttcaagaagcgcgacggcgagcgcagc
ttcggtgaccgcagcggcagcgaccgcggcggcttcaagaagcgcgacggcgaccgcggc
ggcttcaagccggccggtacccgcgcaccgcgtttccgcgactaa
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