KEGG   Apodemus sylvaticus (European woodmouse): 127671541
Entry
127671541         CDS       T10613                                 
Symbol
Cacna1a
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
  KO
K04344  voltage-dependent calcium channel P/Q type alpha-1A
Organism
asyl  Apodemus sylvaticus (European woodmouse)
Pathway
asyl04010  MAPK signaling pathway
asyl04020  Calcium signaling pathway
asyl04721  Synaptic vesicle cycle
asyl04723  Retrograde endocannabinoid signaling
asyl04724  Glutamatergic synapse
asyl04725  Cholinergic synapse
asyl04726  Serotonergic synapse
asyl04727  GABAergic synapse
asyl04728  Dopaminergic synapse
asyl04730  Long-term depression
asyl04742  Taste transduction
asyl04930  Type II diabetes mellitus
asyl05017  Spinocerebellar ataxia
asyl05032  Morphine addiction
asyl05033  Nicotine addiction
asyl05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:asyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127671541 (Cacna1a)
   04020 Calcium signaling pathway
    127671541 (Cacna1a)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    127671541 (Cacna1a)
   04727 GABAergic synapse
    127671541 (Cacna1a)
   04725 Cholinergic synapse
    127671541 (Cacna1a)
   04728 Dopaminergic synapse
    127671541 (Cacna1a)
   04726 Serotonergic synapse
    127671541 (Cacna1a)
   04730 Long-term depression
    127671541 (Cacna1a)
   04723 Retrograde endocannabinoid signaling
    127671541 (Cacna1a)
   04721 Synaptic vesicle cycle
    127671541 (Cacna1a)
  09157 Sensory system
   04742 Taste transduction
    127671541 (Cacna1a)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    127671541 (Cacna1a)
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    127671541 (Cacna1a)
  09165 Substance dependence
   05032 Morphine addiction
    127671541 (Cacna1a)
   05033 Nicotine addiction
    127671541 (Cacna1a)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    127671541 (Cacna1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:asyl04040]
    127671541 (Cacna1a)
Ion channels [BR:asyl04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   127671541 (Cacna1a)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 127671541
NCBI-ProteinID: XP_052022325
LinkDB
Position
21:complement(46212940..46444054)
AA seq 2366 aa
MARFGDEMPGRYGAGGGGSGPAAGVVVGAAGGRGAGGSRQGGQPGAQRMYKQSMAQRART
MALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALE
QHLPDDDKTPMSERLDDTEPYFIGIFCFEAGIKIVALGFAFHKGSYLRNGWNVMDFVVVL
TGILATVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAIL
IFAIIGLEFYMGKFHTTCFEEGTDDIQGESPAPCGTEEPARTCPNGTKCQPYWEGPNNGI
TQFDNILFAVLTVFQCITMEGWTDLLYNSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGV
LSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETDVEQRHPFD
GNSLRRATLKKSKTDLLNPEEAEDQLADIASVGSPFARASIKSAKLENSTFFHKKERRMR
FYIRRMVKTQAFYWTVLSLVALNTLCVAIVHYNQPEWLSDFLYYAEFIFLGLFMSEMFIK
MYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFGISVLRALRLLRIFKVTKYW
ASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDEGTPPTNFDTFPAA
IMTVFQILTGEDWNEVMYDGIKSQGGVQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNL
ANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAVKEQQKNQKPAKSVWEQ
RTSEMRKQNLLASREALYGDAAERWPTTYARPLRPDVKTHLDRPLVVDPQENRNNNTNKS
RAPEALRPTARPRESARDPDARRAWPGSPERAPGREGPYGRESEPQQREHAPPREHAPWD
ADAERAKAGDAPRRHTHRPVAEGEPRRHRARRRPGDEPDDRPERRPRPRDATRPARAADG
EGDDGERKRRHRHGPPAHDDRERRHRRRKENQGSGVPMSGPNLSTTRPIQQDLGRQDLPL
AEDLDNMKNNKLATGGPASPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNSASRRTPN
NPGNPGPPKTPENSLIVTNPSSTQSNSAKTARKPEHMAVEIPPACPPLNHTVVQVNKNAN
PDPLPKKEEEKKEEEDADPGEDGPKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCIL
MVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRD
LWNILDFIVVSGALVAFAFTGNSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVV
NSLKNVFNILIVYMLFMFIFAVVAVQLFKGKFFHCTDESKEFERDCRGKYLLYEKNEVKA
RDREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFY
VVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQN
KQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSL
ECVLKVMAFGILNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKL
LRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGEDEDSDEDEF
QITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPCDKNSGILTADCGNEFAYFYF
VSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHYKD
MYSLLRVISPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAK
GGADKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA
KKLQAMREEQNRTPLMFQRMEPPSPTQEGGPSQNALPSTQLDPGGGLMAQESGLKESPSW
VTQRAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSDSEHYLPMEGQARA
ASMPRLPAENQRRRGRPRGNNLSTISDTSPMKRSASVLGPKGRRLDDYSLERVPPEENQR
YHQRRRDRGHRTSERSLGRYTDVDTGLGTDLSMTTQSGDLPSKDRDQDRGRPKDRKHRPH
HHHHHHHHHPPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPA
PSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPR
WPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGYYA
GHGAPRPRTARRGAHDAYSESEDDWC
NT seq 7101 nt   +upstreamnt  +downstreamnt
atggcccgctttggagacgagatgccgggccgctacggcgcaggcggaggaggctcaggg
ccggccgccggggtggtcgtgggcgccgcgggcggccgaggagccgggggcagccggcag
ggcgggcagcccggagcgcagaggatgtacaagcagtcgatggcgcagagagcgcggacc
atggccctctacaaccccatccctgtccgccagaactgcctcacggtcaaccgctccctg
ttcctcttcagtgaagacaacgtggtgagaaaatacgccaaaaagatcacggaatggcct
cccttcgagtacatgatcctggccaccatcattgctaactgcatcgtcctggccctggag
cagcacctccctgatgacgacaagacacccatgtccgagcggctggatgacacagaaccg
tacttcattggaatcttctgttttgaggctggaattaagatcgtggctcttggctttgcc
ttccacaaaggctcctacctgaggaatggctggaacgtcatggactttgtcgtggtgcta
acaggcatcttggccactgtcgggacggagtttgacctacggacactgagggcggttcgt
gtgctgcggccactcaagctggtgtctggaatcccaagtttacaagtcgtcctgaagtcg
atcatgaaggccatgatcccgctgctgcagatcggcctcctcctgtttttcgcaatcctt
atttttgcaatcatagggttagaattttatatgggaaaatttcataccacctgctttgaa
gaggggacagacgacatccagggtgagtcgccagctccgtgtgggacagaggagcctgcc
cggacctgccccaacgggaccaaatgtcagccgtactgggaaggtcccaacaacggcatc
actcagttcgacaacatcctgtttgctgtgctcactgtcttccagtgcatcaccatggaa
ggctggactgatctcctctacaatagcaacgatgcctcagggaacacttggaactggttg
tacttcatccccctcatcatcatcggctccttttttatgctgaacctcgtgctgggtgtg
ctgtctggggagtttgccaaagaaagggaacgcgtggagaacaggagggcttttctgaag
ctcagaagacaacagcagattgaacgtgagctcaatggatacatggaatggatctcaaaa
gcagaagaggtgatcctcgcggaggacgagacagacgtggagcagaggcacccttttgat
ggtaactctcttcggagagctactctgaagaaaagcaagacggaccttctcaaccctgag
gaggcggaggaccagctggccgacatcgcgtctgtggggtctcccttcgccagagctagc
atcaaaagtgccaagctggagaactcaactttttttcacaaaaaggaaagaagaatgcgt
ttctacatccgccgcatggtcaaaactcaggccttctactggaccgtgctcagtctggta
gccctcaacacgctgtgcgtcgccattgtccactacaaccagcccgagtggctctccgac
ttcctctactatgcagaattcattttcttaggactctttatgtccgaaatgtttataaaa
atgtacgggctcgggacgcggccttacttccactcctccttcaactgctttgactgtggg
gtcatcattgggagcatctttgaagtcatctgggctgtcataaaacctggtacatccttt
ggaatcagcgtgttacgagctctcaggttactgcgtattttcaaagtcacgaagtactgg
gcatccctcagaaacctggttgtttccctcctcaactccatgaagtccatcataagtctg
ctgttcctcctcttcctgttcatcgttgtctttgccctcttggggatgcagctgttcggt
ggccagtttaattttgatgaggggacccctcccaccaactttgacacttttccagcagca
ataatgactgtgtttcagatcctgactggcgaggactggaatgaggtcatgtatgatggg
atcaagtctcagggcggcgtgcagggcggcatggtgttctccatctacttcatcgtcctc
accctcttcgggaactacaccctgctgaacgtgttcttggctatcgcagtggacaacctg
gccaatgcccaggagctcaccaaggatgaacaagaagaggaagaggcagccaatcagaaa
ctggctctacagaaagcaaaggaggtagcagaagtgagtcccctgtctgcagccaacatg
tccatagctgtgaaggagcagcagaagaaccagaagcctgccaagtcggtctgggagcag
cgaaccagcgagatgcgcaagcagaacctgctggccagccgcgaggcgctgtacggggac
gcggctgagcgctggcccacgacctacgcgcgcccgctgcggcccgacgtgaagacgcac
ttggaccggccgctcgtggtggacccgcaggagaaccggaacaacaacaccaacaagagc
cgagcgccagaagcactgcgcccgaccgcgcggccccgcgagagcgcgcgcgaccccgac
gcgcggcgcgcctggcccggcagccccgagcgcgcccctggacgagagggcccgtacggg
cgcgagagcgagccgcagcagcgcgagcacgcgccgccccgcgagcacgcaccctgggac
gcggacgccgagcgcgccaaagctggggacgcgccccgccgccacacgcaccggcctgtg
gccgagggcgagcctcgccgccaccgcgcccgccgccggccaggggacgaacccgacgac
cggccggagcgcaggccgcgtccccgcgacgccactaggccggcccgcgctgcagacggc
gaaggcgatgatggggagcgcaagcggcgacaccgacacgggccgcccgcccacgacgac
agggagcgcagacaccggcgcagaaaagagaaccagggctctggggtccccatgtctggt
cccaacctgtccaccaccaggccaatccagcaggacctgggccgccaggacctgccactg
gctgaggaccttgacaacatgaagaataacaagttggccaccggggggcctgccagtccc
cacgacagcctgggtcacagcggccttccccctagccccgccaagatcgggaacagcacc
aaccctggtcccgccttggccaccaacccccagaactctgccagccgcaggacacccaac
aacccgggcaaccccgggccccccaagactcccgagaacagccttatcgtcaccaacccc
agcagcacccagtccaactcagcgaagactgccaggaaacctgagcacatggcggtggag
atccccccggcctgcccgcccctcaaccacaccgtggtccaagtaaacaaaaacgccaac
ccagacccactgccaaagaaagaggaagagaagaaggaggaagaggacgcagaccccggg
gaggacggcccaaagcccatgccgccctacagctccatgttcatcctctccaccaccaac
cccctccgccggctgtgccattacatcctgaacctgcgctacttcgagatgtgcatccta
atggtaatcgccatgagcagcatcgcgctggccgccgaggacccggtgcagcccaacgca
ccccgcaacaacgtgctgcgatattttgactatgttttcacaggcgtgttcacctttgag
atggtgatcaagatgatcgacctgggcctcgtcttacatcagggggcctacttccgtgac
ctgtggaacattctggacttcatagtggtcagtggggccttggtggcctttgccttcact
ggcaacagcaaagggaaggacatcaacaccattaagtctctccgagtcctccgggtgctc
cgacctctgaagaccatcaaacggctgccaaagttgaaggccgtgtttgactgcgtggtg
aactcgctcaagaacgtcttcaacatcctcattgtctacatgctgttcatgttcatcttc
gccgtggtagccgtgcagctcttcaagggcaaattcttccactgcacggacgagtccaag
gagtttgagagagactgtcgaggcaagtacctcctgtatgagaagaacgaagtaaaggca
cgggaccgagagtggaagaagtacgagttccactacgacaacgtgctctgggctctgctc
acactcttcacggtgtccacaggagagggctggccacaggtcctgaagcactcagtggat
gccacttttgagaaccagggccccagccccgggtaccgcatggagatgtccatcttctac
gtggtgtactttgtagtgtttcccttcttctttgtcaatatctttgtggccttgatcatc
atcacctttcaagagcagggagacaagatgatggaagagtacagcctggagaaaaatgag
agggcctgcatagacttcgccatcagtgccaagccgctgaccaggcacatgccccagaac
aagcagagtttccagtatcgaatgtggcagttcgtggtgtccccaccctttgagtacacc
atcatggctatgatcgctctcaacaccatcgtgctgatgatgaagttctacggagcctcg
gtggcctacgagaacgcccttcgagtgttcaacattgtcttcacctccctcttctctctc
gaatgtgtgctcaaagtcatggcttttgggattctgaactatttccgcgatgcctggaac
atcttcgactttgtgactgttctgggcagcatcaccgacatcctcgtcacggagtttggg
aataacttcatcaacctgagctttctccgtctcttccgtgctgcccgactcatcaaactc
ctccgccagggttacaccatccgcattctcctctggactttcgtgcagtctttcaaggcc
ctgccttacgtctgcctgctgatcgccatgctcttcttcatctatgccatcatcgggatg
caggtgtttggcaacatcggcattgacggggaagatgaggacagcgatgaggatgagttc
caaatcacggagcacaataacttccggaccttcttccaagcgctcatgcttctcttccgg
agcgccacaggggaggcgtggcacaacatcatgctctcctgcctcagcggaaaaccatgc
gataagaactccgggatcctcacggcggactgcggcaacgagtttgcgtacttctacttc
gtctcgtttatcttcctgtgctcatttctgatgctgaatctctttgttgctgtcatcatg
gacaacttcgagtacctcacccgagattcctccatcctgggcccccaccacctggatgag
tacgtgcgtgtctgggcggagtatgaccccgctgcctgcggccgcattcactataaggac
atgtacagtttattgcgagtaatatcgccccctctcggcttaggcaagaaatgtcctcat
agggttgcttgcaagagactcctgcggatggacctgcctgtagcagatgacaacacagtt
cacttcaattccaccctgatggctctgatccgaactgccctggatatcaaaattgccaag
ggtggggctgacaagcagcaaatggatgcagagcttcgcaaggagatgatggccatttgg
cccaacctgtctcagaagaccctggatctgctagtcacacctcacaaatccacggacctg
acagtgggtaagatctacgcagccatgatgatcatggagtattaccggcaaagcaaggcc
aagaagctgcaggccatgcgagaggagcagaaccggaccccactcatgttccagcgcatg
gagcctccatcgccaacacaggagggaggacccagccagaacgcccttccctccactcag
ctggacccaggaggaggcctgatggctcaagaaagcggcttgaaggagagcccgtcctgg
gtgacccagcgggcccaagagatgttccagaagactggcacctggagcccggagcgaggg
ccacccatcgacatgcccaacagccagcccaactcccagtctgtggagatgcgagaaatg
ggtactgatggctactcagacagcgaacactacctccccatggaaggccaggccagggcc
gcctccatgccacgcctcccagcggagaaccagaggagaaggggccggccacgtggaaat
aacctcagtaccatctctgataccagccccatgaagcgctcagcctccgtgctgggacct
aaaggccggagactagatgactactcactagagcgggtaccgcctgaggagaaccaacgg
taccaccaacgccgccgggaccgtggccaccgcacctctgagcgctctctgggcagatac
actgatgtggacacaggcctagggacagatctgagcatgaccacccaatcgggtgacctg
ccctccaaagatcgggaccaggaccggggccggcccaaggaccggaagcatcggccacac
caccaccaccaccatcatcaccatcatcccccggcccccgaccgggatcgctacgcacag
gagcggccggacaccggccgggcgcgggcccgggagcagcgctggtcccgctcgcccagc
gagggtcgggagcacacgacacacagacagggcagtagttccgtcagtggaagcccagcc
ccctctacgtccggcaccagcacgccgcggcgcggccgccgccagctcccccagaccccc
tgcaccccgcggccgcttgtgtcctactcgcccgctccgcgcaggcctgcggcgcgcagg
atggcgggtcccgcagcgccccctggcggctcgccgcggggttgccgccgtgcgccgcgc
tggcctgcgcatgcgcccgaaggcccgcggccgcgcggcgccgactacaccgagcccgac
agcccgcgcgagccgccagggggcgcgcacgatcccgcgccgcggtcgcccaggactccg
cgcgccgcgggctgcgcgtcaccgcgccacggccgcaggctgcccaatggttactacgcg
gggcacggcgcgccgcggccgcgcacagcccgcaggggcgcgcacgacgcgtacagcgag
agcgaggacgactggtgctaa

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