Apodemus sylvaticus (European woodmouse): 127673316
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Entry
127673316 CDS
T10613
Symbol
Ubc
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03320
PPAR signaling pathway
asyl04120
Ubiquitin mediated proteolysis
asyl04137
Mitophagy - animal
asyl04140
Autophagy - animal
asyl05012
Parkinson disease
asyl05022
Pathways of neurodegeneration - multiple diseases
asyl05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127673316 (Ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127673316 (Ubc)
04137 Mitophagy - animal
127673316 (Ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127673316 (Ubc)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
127673316 (Ubc)
09164 Neurodegenerative disease
05012 Parkinson disease
127673316 (Ubc)
05022 Pathways of neurodegeneration - multiple diseases
127673316 (Ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asyl04121
]
127673316 (Ubc)
Ubiquitin system [BR:
asyl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
127673316 (Ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
127673316
NCBI-ProteinID:
XP_052024860
LinkDB
All DBs
Position
22:43876721..43881775
Genome browser
AA seq
1114 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSVTNKKVKQEDRRTFLTTVSRKSPPCACSWV
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccttaactggcaagaccatcaccctggaggtcgagcccagc
gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggtcgcaccctgtcagactacaac
atccagaaagagtccaccctgcacctggtccttcgcctcaggggtgggatgcagatcttt
gtgaagaccctgactggcaagaccatcaccctggaagtcgagcccagtgacaccattgag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggttgatc
tttgcaggcaagcagctggaagatggtcgcaccctgtcagactacaacatccagaaggaa
tccactctgcacctggtccttcgcctcaggggtgggatgcagatctttgtgaagaccctg
actggcaagaccatcaccctggaagtcgaacccagtgacaccattgagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggtcgcaccctgtcagactacaacatccagaaagagtccaccctgcac
ctggtccttcgcctcaggggtgggatgcagatctttgtgaagaccctgactggcaagacc
atcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggtcgcaccctgtcagactacaacatccagaaggaatccaccctgcacctggtccttcgc
ctcaggggtgggatgcagatctttgtgaagaccctgactggcaagaccatcaccctggag
gtcgagcccagcgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatc
ccccctgaccagcagaggttgatctttgcaggcaagcagctggaagatggtcgcaccctg
tcagactacaacatccagaaagagtccaccctgcatctggtccttcgcctcaggggtgga
atgcagatctttgtgaagaccctgactggcaagaccatcaccctggaggtcgagcccagt
gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggtcgcaccctgtcagactacaac
atccagaaggaatccaccctgcacctggtccttcgcctcaggggtgggatgcagatcttt
gtgaagaccctgactggcaagaccatcaccctggaagtcgaacccagtgacaccattgag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggtcgcaccctgtcagactacaacatccagaaagag
tccaccctgcacctggtccttcgcctcaggggtgggatgcagatctttgtgaagaccctg
actggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggtcgcaccctgtcagactacaacatccagaaggaatccaccctgcac
ctggtccttcgcctcaggggtgggatgcagatctttgtgaagaccctgactggcaagacc
atcaccctggaggtcgagcccagcgacaccattgagaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggttgatctttgcaggcaagcagctggaagat
ggtcgcaccctgtcagactacaacatccagaaagagtccaccctgcatctggtccttcgc
ctcaggggtggaatgcagatctttgtgaagaccctgactggcaagaccatcaccctggag
gtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggtcgcaccctg
tcagactacaacatccagaaggaatccaccctgcacctggtccttcgcctcaggggtggg
atgcagatctttgtgaagaccctgactggcaagaccatcaccctggaggtcgagcccagc
gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggtcgcaccctgtcagactacaac
atccagaaggaatccaccctgcacctggtccttcgcctcaggggtgggatgcagatcttt
gtgaagaccctgactggcaagaccatcaccctggaagtcgagcccagtgacaccattgag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggtcgcaccctgtcagactacaacatccagaaggaa
tccaccctgcacctggtccttcgcctcaggggtggaatgcagatctttgtgaagaccctg
actggcaagaccatcaccctggaagtcgagcccagcgataccattgagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggtcgcaccctgtcagactacaacatccagaaggaatccaccctgcac
ctggtccttcgcctcaggggtgggatgcagatctttgtgaagaccctgactggcaagacc
atcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggtcgcaccctgtcagactacaacatccagaaagagtccaccctgcacctggtccttcgc
ctcaggggtgggatgcagatctttgtgaagaccctgactggcaagaccatcaccctggag
gtcgagcccagtgttaccaacaagaaggtcaaacaggaagataggcgtacctttctcacc
acagtatctcgaaagagccctccctgtgcttgttcttgggtttga
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integrated database retrieval system
