Apodemus sylvaticus (European woodmouse): 127685280
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Entry
127685280 CDS
T10613
Symbol
Traf1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04064
NF-kappa B signaling pathway
asyl04210
Apoptosis
asyl04668
TNF signaling pathway
asyl05200
Pathways in cancer
asyl05202
Transcriptional misregulation in cancer
asyl05203
Viral carcinogenesis
asyl05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
127685280 (Traf1)
04668 TNF signaling pathway
127685280 (Traf1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127685280 (Traf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127685280 (Traf1)
05202 Transcriptional misregulation in cancer
127685280 (Traf1)
05203 Viral carcinogenesis
127685280 (Traf1)
09162 Cancer: specific types
05222 Small cell lung cancer
127685280 (Traf1)
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
DUF6124
Motif
Other DBs
NCBI-GeneID:
127685280
NCBI-ProteinID:
XP_052038243
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Position
5:complement(13921783..13936820)
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AA seq
409 aa
AA seq
DB search
MASSSAPDENEFQFGCPPAPCQDPSEPRALCCTACLSENLRDDEDRICPKCRADSLQPVS
PGSPLTQEKVHPDVAEAGIMCPFAGVGCPFKGSPQSMQEHEATSQSSHLYLLLGVLKEWK
SSPGSNPGSAPMALERNLSELQLQAAVEATGDLEVDCYRAPCCENQEELALQHLVKEKLL
AQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLAQKD
QALGKLEHSLRLMEEASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCL
RLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLS
SASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagctcagcccctgatgaaaacgagtttcaatttggttgcccccctgctccc
tgccaggacccatcagagcccagagctctctgctgcacagcctgtctctctgagaacctg
agagatgatgaggatcggatctgtcctaaatgcagagcagacagcctccaacctgtgagc
ccaggaagccctctgactcaggagaaggttcaccctgatgtagctgaggctggaatcatg
tgtccctttgcaggtgttggctgtcccttcaaggggagcccacaatccatgcaggagcac
gaggccacctcccagtcctcccacctgtacctgctgctgggggtcttaaaggagtggaag
tcctcaccaggctccaatccaggctctgcacccatggcactggagagaaacctgtcagag
ctgcagcttcaggcagcagtggaggcgacgggggacctggaggtagactgctaccgggca
ccttgctgtgagaaccaggaagaactggccctgcagcacctcgtgaaggagaagctgctg
gctcagctagaggagaagctgcgtgtgttcgcaaacatcgttgctgtcctcaacaaggaa
gtggaggcttcccacctggcactggctgcctccatccaccagagccagttggaccgagag
cacatcctgagcttggagcagagggtggtggagttacaacagaccctggctcaaaaagac
caagccctgggcaagcttgagcacagtctgcggctcatggaggaggcgtcctttgacggc
acgttcctgtggaagatcacgaatgtcaccaagcggtgccacgagtcagtgtgtggccgg
actgtcagcctcttctctccagctttctacactgccaagtacggttacaagctgtgcctg
cgcttgtacctgaacggggatggctcaggcaagaagacccacctgtccctgttcatcgtg
atcatgagaggagaatatgacgctctcctgccctggcctttccggaacaaggtcaccttt
atgctacttgaccagaacaaccgtgagcacgccattgatgccttccggcctgacctgagc
tcggcttccttccagaggccgcagagtgagaccaacgtggccagcggctgcccactcttc
ttccccctcagcaagctgcagtcgcccaagcacgcctatgtaaaagatgacacgatgttc
ctcaaatgcattgtggacactagtgcttag
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